Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_G21
(652 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 231 2e-60
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 231 2e-60
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 231 2e-60
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 231 2e-60
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 231 2e-60
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 231 2e-60
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 229 9e-60
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 164 2e-40
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 118 2e-26
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 83 1e-15
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 231 bits (564), Expect = 2e-60
Identities = 104/160 (65%), Positives = 122/160 (76%)
Frame = +3
Query: 168 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 347
++QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 348 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFTCYLDVXLARTTTG 527
AAY TG EYNVE +D P AFTCYLD LARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 528 ARVFGAMKGAVDGGLNVPHSIKRFPXYDAESKKFNAEVHR 647
+VFGA+KGAVDGGL++PHS KRFP YD+ESK+FNAEVHR
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHR 196
Score = 76.6 bits (180), Expect = 7e-14
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +2
Query: 59 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 166
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 231 bits (564), Expect = 2e-60
Identities = 104/160 (65%), Positives = 122/160 (76%)
Frame = +3
Query: 168 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 347
++QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 348 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFTCYLDVXLARTTTG 527
AAY TG EYNVE +D P AFTCYLD LARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 528 ARVFGAMKGAVDGGLNVPHSIKRFPXYDAESKKFNAEVHR 647
+VFGA+KGAVDGGL++PHS KRFP YD+ESK+FNAEVHR
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHR 196
Score = 76.6 bits (180), Expect = 7e-14
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +2
Query: 59 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 166
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 231 bits (564), Expect = 2e-60
Identities = 104/160 (65%), Positives = 122/160 (76%)
Frame = +3
Query: 168 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 347
++QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 348 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFTCYLDVXLARTTTG 527
AAY TG EYNVE +D P AFTCYLD LARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 528 ARVFGAMKGAVDGGLNVPHSIKRFPXYDAESKKFNAEVHR 647
+VFGA+KGAVDGGL++PHS KRFP YD+ESK+FNAEVHR
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHR 196
Score = 76.6 bits (180), Expect = 7e-14
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +2
Query: 59 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 166
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 231 bits (564), Expect = 2e-60
Identities = 104/160 (65%), Positives = 122/160 (76%)
Frame = +3
Query: 168 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 347
++QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 348 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFTCYLDVXLARTTTG 527
AAY TG EYNVE +D P AFTCYLD LARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 528 ARVFGAMKGAVDGGLNVPHSIKRFPXYDAESKKFNAEVHR 647
+VFGA+KGAVDGGL++PHS KRFP YD+ESK+FNAEVHR
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHR 196
Score = 76.6 bits (180), Expect = 7e-14
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +2
Query: 59 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 166
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 231 bits (564), Expect = 2e-60
Identities = 104/160 (65%), Positives = 122/160 (76%)
Frame = +3
Query: 168 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 347
++QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 348 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFTCYLDVXLARTTTG 527
AAY TG EYNVE +D P AFTCYLD LARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 528 ARVFGAMKGAVDGGLNVPHSIKRFPXYDAESKKFNAEVHR 647
+VFGA+KGAVDGGL++PHS KRFP YD+ESK+FNAEVHR
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHR 196
Score = 76.6 bits (180), Expect = 7e-14
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +2
Query: 59 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 166
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 231 bits (564), Expect = 2e-60
Identities = 104/160 (65%), Positives = 122/160 (76%)
Frame = +3
Query: 168 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 347
++QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 44 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 103
Query: 348 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFTCYLDVXLARTTTG 527
AAY TG EYNVE +D P AFTCYLD LARTTTG
Sbjct: 104 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 163
Query: 528 ARVFGAMKGAVDGGLNVPHSIKRFPXYDAESKKFNAEVHR 647
+VFGA+KGAVDGGL++PHS KRFP YD+ESK+FNAEVHR
Sbjct: 164 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHR 203
Score = 76.6 bits (180), Expect = 7e-14
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +2
Query: 59 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 166
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 8 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 43
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 229 bits (559), Expect = 9e-60
Identities = 103/160 (64%), Positives = 121/160 (75%)
Frame = +3
Query: 168 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 347
++QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCA Y+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYA 96
Query: 348 AAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFTCYLDVXLARTTTG 527
AAY TG EYNVE +D P AFTCYLD LARTTTG
Sbjct: 97 AAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTG 156
Query: 528 ARVFGAMKGAVDGGLNVPHSIKRFPXYDAESKKFNAEVHR 647
+VFGA+KGAVDGGL++PHS KRFP YD+ESK+FNAEVHR
Sbjct: 157 NKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHR 196
Score = 76.6 bits (180), Expect = 7e-14
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +2
Query: 59 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 166
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 164 bits (399), Expect = 2e-40
Identities = 75/125 (60%), Positives = 89/125 (71%)
Frame = +3
Query: 210 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXX 389
+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60
Query: 390 XXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFTCYLDVXLARTTTGARVFGAMKGAVDGG 569
EYNVE +D P AFTCYLD LARTTTG +VFGA+KGAVDGG
Sbjct: 61 NRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 120
Query: 570 LNVPH 584
L++PH
Sbjct: 121 LSIPH 125
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 118 bits (284), Expect = 2e-26
Identities = 49/62 (79%), Positives = 60/62 (96%)
Frame = +3
Query: 168 LVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYA 347
++QDKNKYNTPKYR+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYA
Sbjct: 37 VIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYA 96
Query: 348 AA 353
AA
Sbjct: 97 AA 98
Score = 76.6 bits (180), Expect = 7e-14
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +2
Query: 59 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 166
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 82.6 bits (195), Expect = 1e-15
Identities = 35/44 (79%), Positives = 41/44 (93%)
Frame = +3
Query: 516 TTTGARVFGAMKGAVDGGLNVPHSIKRFPXYDAESKKFNAEVHR 647
TTTG +VFGA+KGAVDGGL++PHS KRFP YD+ESK+FNAEVHR
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHR 44
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,754,445
Number of Sequences: 237096
Number of extensions: 1798407
Number of successful extensions: 3000
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2991
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -