Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_G18
(573 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L20837-1|AAA03087.1| 192|Anopheles gambiae ribosomal protein S7... 284 2e-78
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p... 25 1.3
AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic acetylch... 25 1.7
AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic acetylch... 25 1.7
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p... 25 2.3
U43500-1|AAA93303.1| 280|Anopheles gambiae a-CD36 protein. 23 7.1
EF519508-1|ABP73571.1| 250|Anopheles gambiae APL2 protein. 23 7.1
DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific doub... 23 9.3
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein. 23 9.3
AM690372-1|CAM84316.1| 353|Anopheles gambiae purine nucleoside ... 23 9.3
>L20837-1|AAA03087.1| 192|Anopheles gambiae ribosomal protein S7
protein.
Length = 192
Score = 284 bits (696), Expect = 2e-78
Identities = 135/172 (78%), Positives = 153/172 (88%)
Frame = +1
Query: 22 RISQALVELETNSDLKAQLRELYITKAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRE 201
+I QA++ELE NSDLK QLR+LYIT+A+E+E +NKK+IIIYVP+PK KAFQK+Q RLVRE
Sbjct: 21 QIGQAILELEMNSDLKPQLRDLYITRAREVEFNNKKAIIIYVPVPKQKAFQKVQTRLVRE 80
Query: 202 LEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSXTLTSVYDAILEDLVFPAEIVGK 381
LEKKFSGKHVVF+ +R+ILPKP R NKQKRPRS +T+VYDAILEDLVFPAE+VGK
Sbjct: 81 LEKKFSGKHVVFIAERRILPKPMRGRRDPNKQKRPRSPNVTAVYDAILEDLVFPAEVVGK 140
Query: 382 RIRVKLDGSQLIKVHLXKNQQTTIEHKVDTFQSVYXKLTGREVTFEFPEPYL 537
RIRVKLDGSQLIKVHL KNQQTTIEHKVDTF SVY KLTGR+VTFEFPE YL
Sbjct: 141 RIRVKLDGSQLIKVHLDKNQQTTIEHKVDTFASVYKKLTGRDVTFEFPENYL 192
>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
protein.
Length = 1077
Score = 25.4 bits (53), Expect = 1.3
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -2
Query: 554 VIG*VYK*GSGNSKVTSRPVSXLYTDWKV 468
VI V K G G++ + RP+S L TD+K+
Sbjct: 503 VIVLVRKKGGGDAMSSIRPISLLNTDYKL 531
>AY705398-1|AAU12507.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 25.0 bits (52), Expect = 1.7
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +1
Query: 271 HKTRVANKQKRPRSXTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLXKNQQTT 450
H N + L S Y+ ++ +V ++++ R+ +KL SQLI V+L KNQ T
Sbjct: 19 HGAVAGNPDAKRLYDDLLSNYNKLVRPVVNTSDVL--RVCIKLKLSQLIDVNL-KNQIMT 75
>AY705397-1|AAU12506.1| 555|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 4 protein.
Length = 555
Score = 25.0 bits (52), Expect = 1.7
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +1
Query: 271 HKTRVANKQKRPRSXTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLXKNQQTT 450
H N + L S Y+ ++ +V ++++ R+ +KL SQLI V+L KNQ T
Sbjct: 19 HGAVAGNPDAKRLYDDLLSNYNKLVRPVVNTSDVL--RVCIKLKLSQLIDVNL-KNQIMT 75
>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
ion/proton exchanger 3 protein.
Length = 1221
Score = 24.6 bits (51), Expect = 2.3
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = -2
Query: 401 SNLTLMRLPTISAGKTKSSRIASYTEVNVXERGLFCLLATRVLWLGLGRIL 249
+N L+ +P + T SSR + L CLLAT V+W G++L
Sbjct: 54 ANSRLVTVPAPAKELTDSSRSGGLPSSS-SSSSLSCLLATIVMWC-TGQVL 102
>U43500-1|AAA93303.1| 280|Anopheles gambiae a-CD36 protein.
Length = 280
Score = 23.0 bits (47), Expect = 7.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -1
Query: 216 ELLFELTDKPDLDLLKGLQFRHRHIDDDR 130
ELLFE P LDLLK + +I D+
Sbjct: 96 ELLFEGVKDPLLDLLKTINSTSLNIPFDK 124
>EF519508-1|ABP73571.1| 250|Anopheles gambiae APL2 protein.
Length = 250
Score = 23.0 bits (47), Expect = 7.1
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 2/63 (3%)
Frame = +1
Query: 241 GDRKILPKPSHK--TRVANKQKRPRSXTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQL 414
G IL K +H T V + TL ++ I E A GK + +KLDG+QL
Sbjct: 178 GSELILLKLAHNKLTSVDEVPVFDKLITLDLSFNRIREFDFRSAARFGKLVLLKLDGNQL 237
Query: 415 IKV 423
V
Sbjct: 238 ESV 240
>DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific
doublesex protein protein.
Length = 622
Score = 22.6 bits (46), Expect = 9.3
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 107 KLNYTIRSRSSSMCR 151
+ N TIRSRSSS+ R
Sbjct: 271 RTNSTIRSRSSSLSR 285
>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
Length = 1132
Score = 22.6 bits (46), Expect = 9.3
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +3
Query: 9 PSSPSNLAGAGRTRNQLRPQSPTS 80
PSSPS++A + + P+S S
Sbjct: 74 PSSPSSVASPNSRASNMSPESSAS 97
>AM690372-1|CAM84316.1| 353|Anopheles gambiae purine nucleoside
phosphorylase protein.
Length = 353
Score = 22.6 bits (46), Expect = 9.3
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +3
Query: 471 LPVCIQXANGTRSYLRVPRTLFVNLAYD 554
LPV Q T +PRT V YD
Sbjct: 46 LPVAYQQKAATSGPFHMPRTEHVGYTYD 73
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 566,990
Number of Sequences: 2352
Number of extensions: 11156
Number of successful extensions: 40
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54245403
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -