Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_G16
         (649 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U24676-1|AAC46963.1|  148|Drosophila melanogaster twinstar protein.   154   9e-38
U24490-1|AAC46962.1|  148|Drosophila melanogaster twinstar protein.   154   9e-38
U08217-1|AAA19856.1|  148|Drosophila melanogaster protein ( Dros...   154   9e-38
AE013599-3787|AAF47146.1|  148|Drosophila melanogaster CG4254-PA...   154   9e-38
AE014298-2759|AAF48877.1|  148|Drosophila melanogaster CG6873-PA...    99   4e-21
AY069613-1|AAL39758.1|  343|Drosophila melanogaster LD37470p pro...    33   0.25 
AJ430055-1|CAD22537.1|  343|Drosophila melanogaster twinfilin pr...    33   0.25 
AE014297-1802|AAF55022.1|  343|Drosophila melanogaster CG3172-PA...    33   0.25 
AY069123-1|AAL39268.1|  267|Drosophila melanogaster GH13245p pro...    31   1.3  
AE013599-3029|AAF57457.3|  267|Drosophila melanogaster CG13430-P...    31   1.3  
AE013599-3028|AAF57458.1|  267|Drosophila melanogaster CG13430-P...    31   1.3  
BT010256-1|AAQ23574.1| 1233|Drosophila melanogaster RE33713p pro...    29   7.2  
AE014296-1934|AAN11884.1| 1233|Drosophila melanogaster CG18490-P...    29   7.2  
AE014296-1933|AAF50076.2| 1233|Drosophila melanogaster CG18490-P...    29   7.2  

>U24676-1|AAC46963.1|  148|Drosophila melanogaster twinstar protein.
          Length = 148

 Score =  154 bits (374), Expect = 9e-38
 Identities = 68/78 (87%), Positives = 72/78 (92%)
 Frame = +2

Query: 65  MASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGG 244
           MASGVTVSD CKTTYEEIKKDKKHRYV+FYIRDEKQIDVETV +RNAEY+QFLED+QK G
Sbjct: 1   MASGVTVSDVCKTTYEEIKKDKKHRYVIFYIRDEKQIDVETVADRNAEYDQFLEDIQKCG 60

Query: 245 TGECXYGLFDFEYTHQCQ 298
            GEC YGLFDFEY HQCQ
Sbjct: 61  PGECRYGLFDFEYMHQCQ 78



 Score = 68.1 bits (159), Expect = 1e-11
 Identities = 31/32 (96%), Positives = 31/32 (96%)
 Frame = +3

Query: 324 QKLFLMSWCPDTAKVKKXMLYSSSFDALKKSL 419
           QKLFLMSWCPDTAKVKK MLYSSSFDALKKSL
Sbjct: 87  QKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL 118



 Score = 61.3 bits (142), Expect = 1e-09
 Identities = 30/34 (88%), Positives = 31/34 (91%)
 Frame = +1

Query: 409 KSPLXGVQKYIQATDLSEASQEAVEEKLRATDRQ 510
           K  L GVQKYIQATDLSEAS+EAVEEKLRATDRQ
Sbjct: 115 KKSLVGVQKYIQATDLSEASREAVEEKLRATDRQ 148


>U24490-1|AAC46962.1|  148|Drosophila melanogaster twinstar protein.
          Length = 148

 Score =  154 bits (374), Expect = 9e-38
 Identities = 68/78 (87%), Positives = 72/78 (92%)
 Frame = +2

Query: 65  MASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGG 244
           MASGVTVSD CKTTYEEIKKDKKHRYV+FYIRDEKQIDVETV +RNAEY+QFLED+QK G
Sbjct: 1   MASGVTVSDVCKTTYEEIKKDKKHRYVIFYIRDEKQIDVETVADRNAEYDQFLEDIQKCG 60

Query: 245 TGECXYGLFDFEYTHQCQ 298
            GEC YGLFDFEY HQCQ
Sbjct: 61  PGECRYGLFDFEYMHQCQ 78



 Score = 68.1 bits (159), Expect = 1e-11
 Identities = 31/32 (96%), Positives = 31/32 (96%)
 Frame = +3

Query: 324 QKLFLMSWCPDTAKVKKXMLYSSSFDALKKSL 419
           QKLFLMSWCPDTAKVKK MLYSSSFDALKKSL
Sbjct: 87  QKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL 118



 Score = 61.3 bits (142), Expect = 1e-09
 Identities = 30/34 (88%), Positives = 31/34 (91%)
 Frame = +1

Query: 409 KSPLXGVQKYIQATDLSEASQEAVEEKLRATDRQ 510
           K  L GVQKYIQATDLSEAS+EAVEEKLRATDRQ
Sbjct: 115 KKSLVGVQKYIQATDLSEASREAVEEKLRATDRQ 148


>U08217-1|AAA19856.1|  148|Drosophila melanogaster protein (
           Drosophila melanogastercofilin/actin depolymerizing
           factor homolog mRNA, completecds. ).
          Length = 148

 Score =  154 bits (374), Expect = 9e-38
 Identities = 68/78 (87%), Positives = 72/78 (92%)
 Frame = +2

Query: 65  MASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGG 244
           MASGVTVSD CKTTYEEIKKDKKHRYV+FYIRDEKQIDVETV +RNAEY+QFLED+QK G
Sbjct: 1   MASGVTVSDVCKTTYEEIKKDKKHRYVIFYIRDEKQIDVETVADRNAEYDQFLEDIQKCG 60

Query: 245 TGECXYGLFDFEYTHQCQ 298
            GEC YGLFDFEY HQCQ
Sbjct: 61  PGECRYGLFDFEYMHQCQ 78



 Score = 68.1 bits (159), Expect = 1e-11
 Identities = 31/32 (96%), Positives = 31/32 (96%)
 Frame = +3

Query: 324 QKLFLMSWCPDTAKVKKXMLYSSSFDALKKSL 419
           QKLFLMSWCPDTAKVKK MLYSSSFDALKKSL
Sbjct: 87  QKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL 118



 Score = 61.3 bits (142), Expect = 1e-09
 Identities = 30/34 (88%), Positives = 31/34 (91%)
 Frame = +1

Query: 409 KSPLXGVQKYIQATDLSEASQEAVEEKLRATDRQ 510
           K  L GVQKYIQATDLSEAS+EAVEEKLRATDRQ
Sbjct: 115 KKSLVGVQKYIQATDLSEASREAVEEKLRATDRQ 148


>AE013599-3787|AAF47146.1|  148|Drosophila melanogaster CG4254-PA
           protein.
          Length = 148

 Score =  154 bits (374), Expect = 9e-38
 Identities = 68/78 (87%), Positives = 72/78 (92%)
 Frame = +2

Query: 65  MASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGG 244
           MASGVTVSD CKTTYEEIKKDKKHRYV+FYIRDEKQIDVETV +RNAEY+QFLED+QK G
Sbjct: 1   MASGVTVSDVCKTTYEEIKKDKKHRYVIFYIRDEKQIDVETVADRNAEYDQFLEDIQKCG 60

Query: 245 TGECXYGLFDFEYTHQCQ 298
            GEC YGLFDFEY HQCQ
Sbjct: 61  PGECRYGLFDFEYMHQCQ 78



 Score = 68.1 bits (159), Expect = 1e-11
 Identities = 31/32 (96%), Positives = 31/32 (96%)
 Frame = +3

Query: 324 QKLFLMSWCPDTAKVKKXMLYSSSFDALKKSL 419
           QKLFLMSWCPDTAKVKK MLYSSSFDALKKSL
Sbjct: 87  QKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL 118



 Score = 61.3 bits (142), Expect = 1e-09
 Identities = 30/34 (88%), Positives = 31/34 (91%)
 Frame = +1

Query: 409 KSPLXGVQKYIQATDLSEASQEAVEEKLRATDRQ 510
           K  L GVQKYIQATDLSEAS+EAVEEKLRATDRQ
Sbjct: 115 KKSLVGVQKYIQATDLSEASREAVEEKLRATDRQ 148


>AE014298-2759|AAF48877.1|  148|Drosophila melanogaster CG6873-PA
           protein.
          Length = 148

 Score = 99.1 bits (236), Expect = 4e-21
 Identities = 39/78 (50%), Positives = 58/78 (74%)
 Frame = +2

Query: 65  MASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGG 244
           MASG+ +S  C+  +E+I+K K+HRY VF I+DE++I VE +G R A Y+ FL DLQ+ G
Sbjct: 1   MASGINLSRECQHVFEQIRKLKQHRYAVFVIQDEREIKVEVLGVREANYDDFLADLQRAG 60

Query: 245 TGECXYGLFDFEYTHQCQ 298
           + +C + ++D+EY HQCQ
Sbjct: 61  SNQCRFAVYDYEYQHQCQ 78



 Score = 42.3 bits (95), Expect = 5e-04
 Identities = 17/30 (56%), Positives = 22/30 (73%)
 Frame = +3

Query: 324 QKLFLMSWCPDTAKVKKXMLYSSSFDALKK 413
           +KL LM WCP  A++K  MLYSS+F  LK+
Sbjct: 87  EKLILMLWCPTLARIKDKMLYSSTFAVLKR 116



 Score = 39.1 bits (87), Expect = 0.005
 Identities = 19/34 (55%), Positives = 24/34 (70%)
 Frame = +1

Query: 409 KSPLXGVQKYIQATDLSEASQEAVEEKLRATDRQ 510
           K    GVQK IQAT+  EA + AVEE+LR+ DR+
Sbjct: 115 KREFPGVQKCIQATEPEEACRNAVEEQLRSLDRE 148


>AY069613-1|AAL39758.1|  343|Drosophila melanogaster LD37470p
           protein.
          Length = 343

 Score = 33.5 bits (73), Expect = 0.25
 Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
 Frame = +3

Query: 336 LMSWCPDTAKVKKXMLYSSSFDALKK---SLXRSSEVHPSDRPLGSVSGGRRRE 488
           L+SW PDTA +++ M+Y+S+   LK    S   + E+H +     ++ G RR +
Sbjct: 85  LISWTPDTASIRQKMVYASTKATLKTEFGSAYITEELHATTLDECTLEGYRRHK 138


>AJ430055-1|CAD22537.1|  343|Drosophila melanogaster twinfilin
           protein.
          Length = 343

 Score = 33.5 bits (73), Expect = 0.25
 Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
 Frame = +3

Query: 336 LMSWCPDTAKVKKXMLYSSSFDALKK---SLXRSSEVHPSDRPLGSVSGGRRRE 488
           L+SW PDTA +++ M+Y+S+   LK    S   + E+H +     ++ G RR +
Sbjct: 85  LISWTPDTASIRQKMVYASTKATLKTEFGSAYITEELHATTLDECTLEGYRRHK 138


>AE014297-1802|AAF55022.1|  343|Drosophila melanogaster CG3172-PA
           protein.
          Length = 343

 Score = 33.5 bits (73), Expect = 0.25
 Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
 Frame = +3

Query: 336 LMSWCPDTAKVKKXMLYSSSFDALKK---SLXRSSEVHPSDRPLGSVSGGRRRE 488
           L+SW PDTA +++ M+Y+S+   LK    S   + E+H +     ++ G RR +
Sbjct: 85  LISWTPDTASIRQKMVYASTKATLKTEFGSAYITEELHATTLDECTLEGYRRHK 138


>AY069123-1|AAL39268.1|  267|Drosophila melanogaster GH13245p
           protein.
          Length = 267

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 16/58 (27%), Positives = 25/58 (43%)
 Frame = +2

Query: 83  VSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGGTGEC 256
           VS    T+  +++ +K+ RY V ++RD+ Q      G        F    Q GG   C
Sbjct: 155 VSGWGSTSISQMQPEKRLRYTVVHLRDQNQCARNYFGAGTVTNTMFCAGTQAGGRDSC 212


>AE013599-3029|AAF57457.3|  267|Drosophila melanogaster CG13430-PB,
           isoform B protein.
          Length = 267

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 16/58 (27%), Positives = 25/58 (43%)
 Frame = +2

Query: 83  VSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGGTGEC 256
           VS    T+  +++ +K+ RY V ++RD+ Q      G        F    Q GG   C
Sbjct: 155 VSGWGSTSISQMQPEKRLRYTVVHLRDQNQCARNYFGAGTVTNTMFCAGTQAGGRDSC 212


>AE013599-3028|AAF57458.1|  267|Drosophila melanogaster CG13430-PA,
           isoform A protein.
          Length = 267

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 16/58 (27%), Positives = 25/58 (43%)
 Frame = +2

Query: 83  VSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGGTGEC 256
           VS    T+  +++ +K+ RY V ++RD+ Q      G        F    Q GG   C
Sbjct: 155 VSGWGSTSISQMQPEKRLRYTVVHLRDQNQCARNYFGAGTVTNTMFCAGTQAGGRDSC 212


>BT010256-1|AAQ23574.1| 1233|Drosophila melanogaster RE33713p
           protein.
          Length = 1233

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 18/65 (27%), Positives = 31/65 (47%)
 Frame = +3

Query: 342 SWCPDTAKVKKXMLYSSSFDALKKSLXRSSEVHPSDRPLGSVSGGRRREAPRHRSPINSI 521
           ++   TA     +  S S  +  KS  +SS  H  +  +G+ +GG  R +P HR+ + S 
Sbjct: 747 AYLEQTAAAISNLQQSLSRRSSVKSPAQSSPQHSLESGMGAGAGGGYRRSPLHRALMTSS 806

Query: 522 YTRAR 536
              A+
Sbjct: 807 INEAQ 811


>AE014296-1934|AAN11884.1| 1233|Drosophila melanogaster CG18490-PC,
           isoform C protein.
          Length = 1233

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 18/65 (27%), Positives = 31/65 (47%)
 Frame = +3

Query: 342 SWCPDTAKVKKXMLYSSSFDALKKSLXRSSEVHPSDRPLGSVSGGRRREAPRHRSPINSI 521
           ++   TA     +  S S  +  KS  +SS  H  +  +G+ +GG  R +P HR+ + S 
Sbjct: 747 AYLEQTAAAISNLQQSLSRRSSVKSPAQSSPQHSLESGMGAGAGGGYRRSPLHRALMTSS 806

Query: 522 YTRAR 536
              A+
Sbjct: 807 INEAQ 811


>AE014296-1933|AAF50076.2| 1233|Drosophila melanogaster CG18490-PB,
           isoform B protein.
          Length = 1233

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 18/65 (27%), Positives = 31/65 (47%)
 Frame = +3

Query: 342 SWCPDTAKVKKXMLYSSSFDALKKSLXRSSEVHPSDRPLGSVSGGRRREAPRHRSPINSI 521
           ++   TA     +  S S  +  KS  +SS  H  +  +G+ +GG  R +P HR+ + S 
Sbjct: 747 AYLEQTAAAISNLQQSLSRRSSVKSPAQSSPQHSLESGMGAGAGGGYRRSPLHRALMTSS 806

Query: 522 YTRAR 536
              A+
Sbjct: 807 INEAQ 811


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,029,957
Number of Sequences: 53049
Number of extensions: 472032
Number of successful extensions: 1344
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1344
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)