Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_G13
(655 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces po... 101 7e-23
SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces po... 77 3e-15
SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces ... 57 3e-09
SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces ... 42 1e-04
SPBC12D12.07c |trx2||mitochondrial thioredoxin Trx2|Schizosaccha... 36 0.004
SPBC577.08c |txl1|trx3|thioredoxin-like I protein Txl1|Schizosac... 36 0.005
SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyc... 36 0.005
SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|c... 27 2.4
SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate |Schizos... 27 3.1
>SPAC1F5.02 |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 492
Score = 101 bits (243), Expect = 7e-23
Identities = 48/123 (39%), Positives = 74/123 (60%)
Frame = +1
Query: 166 YLCKAAXEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPXYAVAAGLLKTDVPP 345
+ C +A +V + + +++ +V FYAPWCGHCK L P Y AA L+ D
Sbjct: 17 FFCASA--EVPKVNKEGLNELITADKVLMVKFYAPWCGHCKALAPEYESAADELEKD--G 72
Query: 346 VALAKVHCTEGGKSTCEQFSVSGYPTLKIFXKGELSSEYNGPXESNGIVKYMRAQVGPSS 525
++L +V CTE G C ++S+ GYPTL +F G+ S+Y+GP + + +VKYMR Q+ P+
Sbjct: 73 ISLVEVDCTEEG-DLCSEYSIRGYPTLNVFKNGKQISQYSGPRKHDALVKYMRKQLLPTV 131
Query: 526 KEL 534
K +
Sbjct: 132 KPI 134
Score = 59.7 bits (138), Expect = 4e-10
Identities = 34/84 (40%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +1
Query: 187 EDVLDLTDSDFS-AVLSQHDTALVMFYAPWCGHCKRLKPXYAVAAGLLKTDVPPVALAKV 363
ED++ L +F V+ + LV FYAPWCGHCK L P Y A D V +AK+
Sbjct: 355 EDLVVLVADNFDDIVMDETKDVLVEFYAPWCGHCKNLAPTYEKLAEEYSDD-SNVVVAKI 413
Query: 364 HCTEGGKSTCEQFSVSGYPTLKIF 435
TE S S+SG+PT+ F
Sbjct: 414 DATENDISV----SISGFPTIMFF 433
>SPAC13F5.05 |||thioredoxin family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 363
Score = 76.6 bits (180), Expect = 3e-15
Identities = 46/152 (30%), Positives = 77/152 (50%), Gaps = 6/152 (3%)
Frame = +1
Query: 103 KAPAKFKMFGSLKFVLLLGIIYLCKAAXEDVLDLTDSDFSAVLSQHDTALVMFYAPWCGH 282
+ P F +F + F L+ G+ + ++L +F + +LV+FYAPWCG+
Sbjct: 4 RIPTLFTLFLAC-FSLVSGVFGYSPMFGSNTIELNSKNFRKFVKAKGPSLVVFYAPWCGY 62
Query: 283 CKRLKPXYAVAAGLLKTDVPPVALAKVHC-TEGGKSTCEQFSVSGYPTLKIF---XKGE- 447
CK+L P Y A L + +P A V C + ++ C Q+ V G+PT+K+ KG
Sbjct: 63 CKKLVPTYQKLASNLHSLLPVTA---VDCDADQNRAVCSQYQVQGFPTIKLVYPSSKGSS 119
Query: 448 -LSSEYNGPXESNGIVKYMRAQVGPSSKELLT 540
S++YNG + K++ + PS ++LT
Sbjct: 120 LSSTDYNGDRSYKSLQKFVSDSI-PSKVKILT 150
>SPAC17H9.14c |||protein disulfide isomerase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 359
Score = 56.8 bits (131), Expect = 3e-09
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 3/112 (2%)
Frame = +1
Query: 190 DVLDLTDSDFS-AVLSQHDTALVMFYAPWCGHCKRLKPXYAVAAGLLKTDVPPVALAKVH 366
+V++L +F V+ LV FYA WCG+CKRL P Y + K + P V + K++
Sbjct: 141 NVVELDSLNFDKVVMDDKKDVLVEFYADWCGYCKRLAPTYETLGKVFKNE-PNVEIVKIN 199
Query: 367 CTEGGKSTCEQFSVSGYPTLKIFXKGELSSE--YNGPXESNGIVKYMRAQVG 516
+ V+ +PT+K F K + Y G +++Y+ + G
Sbjct: 200 -ADVFADIGRLHEVASFPTIKFFPKDDKDKPELYEGDRSLESLIEYINKKSG 250
Score = 53.6 bits (123), Expect = 2e-08
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Frame = +1
Query: 247 ALVMFYAPWCGHCKRLKPXYAVAAGLLKTDVPPVALAKVHCTEGGKSTCEQFSVSGYPTL 426
AL+ FYA WCGHCK L P Y G L D V + K+ + +++ ++G+PTL
Sbjct: 42 ALIEFYATWCGHCKSLAPVYE-ELGALFEDHNDVLIGKID-ADTHSDVADKYHITGFPTL 99
Query: 427 KIF-XKGELSSEYNGPXESNGIVKYMRAQVGPSSKELL 537
F G +Y+ + + + +++ + G ++++
Sbjct: 100 IWFPPDGSEPVQYSNARDVDSLTQFVSEKTGIKKRKIV 137
>SPBC3D6.13c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 726
Score = 41.5 bits (93), Expect = 1e-04
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 4/135 (2%)
Frame = +1
Query: 202 LTDSDFSAVLSQHDTALVMFYAPWCGHCKRLKPXYAVAAGLLKTDV--PPVALAKVHCTE 375
LTD+D + +S+ T + +Y P CG CKRL P + K V +V C++
Sbjct: 31 LTDNDLESEVSK-GTWFIKYYLPSCGACKRLGPMWDNMVEKAKEQVEGSNFHFGEVDCSK 89
Query: 376 GGKSTCEQFSVSGYPTLKIFXKGELSSE--YNGPXESNGIVKYMRAQVGPSSKELLTVXD 549
S+C ++ PTL ++ GE+ E + ++ ++ + P + + D
Sbjct: 90 -ELSSCA--NIRAVPTLYLYQNGEIVEEVPFGASTSEASLLDFVETHLNPDTDPDIP-SD 145
Query: 550 FEAFTSKDEXXVCXI 594
+ T +D V I
Sbjct: 146 EDVLTDEDTEEVASI 160
Score = 41.1 bits (92), Expect = 1e-04
Identities = 24/97 (24%), Positives = 44/97 (45%)
Frame = +1
Query: 208 DSDFSAVLSQHDTALVMFYAPWCGHCKRLKPXYAVAAGLLKTDVPPVALAKVHCTEGGKS 387
D+D A L+ + + FY+ C C + + A ++ + +A ++C K
Sbjct: 288 DADIDAALTDKEGWFIQFYSSECDDCDDVSTAWYAMANRMR---GKLNVAHINCAV-SKR 343
Query: 388 TCEQFSVSGYPTLKIFXKGELSSEYNGPXESNGIVKY 498
C+Q+S+ +PT +F K E EY G +V +
Sbjct: 344 ACKQYSIQYFPTF-LFFKEEAFVEYVGLPNEGDLVSF 379
>SPBC12D12.07c |trx2||mitochondrial thioredoxin
Trx2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 121
Score = 36.3 bits (80), Expect = 0.004
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 214 DFSAVLSQHDTALVMFYAPWCGHCKRLKP 300
D++ +S +V FYA WCG CK LKP
Sbjct: 27 DYNTRISADKVTVVDFYADWCGPCKYLKP 55
>SPBC577.08c |txl1|trx3|thioredoxin-like I protein
Txl1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 290
Score = 35.9 bits (79), Expect = 0.005
Identities = 20/62 (32%), Positives = 26/62 (41%)
Frame = +1
Query: 262 YAPWCGHCKRLKPXYAVAAGLLKTDVPPVALAKVHCTEGGKSTCEQFSVSGYPTLKIFXK 441
YA WCG CK + P ++ A K P AKV+ E + V PT F
Sbjct: 27 YADWCGPCKAISPLFSQLAS--KYASPKFVFAKVNVDE-QRQIASGLGVKAMPTFVFFEN 83
Query: 442 GE 447
G+
Sbjct: 84 GK 85
>SPAC7D4.07c |trx1||cytosolic thioredoxin Trx1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 103
Score = 35.9 bits (79), Expect = 0.005
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +1
Query: 211 SDFSAVLSQHDTALVMFYAPWCGHCKRLKPXY 306
S+F +++ Q +V F+A WCG CK + P +
Sbjct: 9 SEFKSIVCQDKLVVVDFFATWCGPCKAIAPKF 40
>SPBC26H8.06 |grx4||glutaredoxin Grx4|Schizosaccharomyces pombe|chr
2|||Manual
Length = 244
Score = 27.1 bits (57), Expect = 2.4
Identities = 17/73 (23%), Positives = 28/73 (38%)
Frame = +1
Query: 250 LVMFYAPWCGHCKRLKPXYAVAAGLLKTDVPPVALAKVHCTEGGKSTCEQFSVSGYPTLK 429
L+ FYAPW CK++ + A D K+ E E F V+ P
Sbjct: 24 LLNFYAPWAAPCKQMNQVFDQFA----KDTKNAVFLKIE-AEKFSDIAESFDVNAVPLFV 78
Query: 430 IFXKGELSSEYNG 468
+ ++ + +G
Sbjct: 79 LIHGAKVLARISG 91
>SPCC4B3.10c |ipk1||inositol 1,3,4,5,6-pentakisphosphate
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 640
Score = 26.6 bits (56), Expect = 3.1
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = +2
Query: 194 FSILQIPTFRLFYLNMIQPWSCF 262
F LQ+ FR + N+++PW CF
Sbjct: 208 FYCLQLQMFRKMH-NIVRPWDCF 229
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,378,880
Number of Sequences: 5004
Number of extensions: 44247
Number of successful extensions: 118
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 115
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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