Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_G11
         (468 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U57847-1|AAB02266.1|   84|Homo sapiens ribosomal protein S27 pro...   138   9e-33
L19739-1|AAA59867.1|   84|Homo sapiens metallopanstimulin protein.    138   9e-33
BC070219-1|AAH70219.1|   84|Homo sapiens ribosomal protein S27 (...   138   9e-33
BC003667-1|AAH03667.1|   84|Homo sapiens ribosomal protein S27-l...   138   9e-33
BC002658-1|AAH02658.1|   84|Homo sapiens ribosomal protein S27 (...   138   9e-33
AL358472-19|CAI14033.1|   84|Homo sapiens ribosomal protein S27 ...   138   9e-33
AB061845-1|BAB79483.1|   84|Homo sapiens ribosomal protein S27 p...   138   9e-33
BC047648-1|AAH47648.1|  113|Homo sapiens RPS27L protein protein.      126   5e-29
AB007162-1|BAA25825.1|   69|Homo sapiens ribosomal protein S27 p...   117   2e-26
AL358472-18|CAI14032.1|   66|Homo sapiens ribosomal protein S27 ...    51   2e-06

>U57847-1|AAB02266.1|   84|Homo sapiens ribosomal protein S27
           protein.
          Length = 84

 Score =  138 bits (334), Expect = 9e-33
 Identities = 59/70 (84%), Positives = 63/70 (90%)
 Frame = +3

Query: 84  ERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRAXLT 263
           E+RKHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+A LT
Sbjct: 15  EKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLT 74

Query: 264 EGCSFXRKQH 293
           EGCSF RKQH
Sbjct: 75  EGCSFRRKQH 84


>L19739-1|AAA59867.1|   84|Homo sapiens metallopanstimulin protein.
          Length = 84

 Score =  138 bits (334), Expect = 9e-33
 Identities = 59/70 (84%), Positives = 63/70 (90%)
 Frame = +3

Query: 84  ERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRAXLT 263
           E+RKHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+A LT
Sbjct: 15  EKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLT 74

Query: 264 EGCSFXRKQH 293
           EGCSF RKQH
Sbjct: 75  EGCSFRRKQH 84


>BC070219-1|AAH70219.1|   84|Homo sapiens ribosomal protein S27
           (metallopanstimulin 1) protein.
          Length = 84

 Score =  138 bits (334), Expect = 9e-33
 Identities = 59/70 (84%), Positives = 63/70 (90%)
 Frame = +3

Query: 84  ERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRAXLT 263
           E+RKHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+A LT
Sbjct: 15  EKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLT 74

Query: 264 EGCSFXRKQH 293
           EGCSF RKQH
Sbjct: 75  EGCSFRRKQH 84


>BC003667-1|AAH03667.1|   84|Homo sapiens ribosomal protein S27-like
           protein.
          Length = 84

 Score =  138 bits (334), Expect = 9e-33
 Identities = 59/73 (80%), Positives = 64/73 (87%)
 Frame = +3

Query: 75  LRSERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRA 254
           L  E++KHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+A
Sbjct: 12  LEEEKKKHKEKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKA 71

Query: 255 XLTEGCSFXRKQH 293
            LTEGCSF RKQH
Sbjct: 72  RLTEGCSFRRKQH 84


>BC002658-1|AAH02658.1|   84|Homo sapiens ribosomal protein S27
           (metallopanstimulin 1) protein.
          Length = 84

 Score =  138 bits (334), Expect = 9e-33
 Identities = 59/70 (84%), Positives = 63/70 (90%)
 Frame = +3

Query: 84  ERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRAXLT 263
           E+RKHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+A LT
Sbjct: 15  EKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLT 74

Query: 264 EGCSFXRKQH 293
           EGCSF RKQH
Sbjct: 75  EGCSFRRKQH 84


>AL358472-19|CAI14033.1|   84|Homo sapiens ribosomal protein S27
           (metallopanstimulin 1) protein.
          Length = 84

 Score =  138 bits (334), Expect = 9e-33
 Identities = 59/70 (84%), Positives = 63/70 (90%)
 Frame = +3

Query: 84  ERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRAXLT 263
           E+RKHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+A LT
Sbjct: 15  EKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLT 74

Query: 264 EGCSFXRKQH 293
           EGCSF RKQH
Sbjct: 75  EGCSFRRKQH 84


>AB061845-1|BAB79483.1|   84|Homo sapiens ribosomal protein S27
           protein.
          Length = 84

 Score =  138 bits (334), Expect = 9e-33
 Identities = 59/70 (84%), Positives = 63/70 (90%)
 Frame = +3

Query: 84  ERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRAXLT 263
           E+RKHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+A LT
Sbjct: 15  EKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLT 74

Query: 264 EGCSFXRKQH 293
           EGCSF RKQH
Sbjct: 75  EGCSFRRKQH 84


>BC047648-1|AAH47648.1|  113|Homo sapiens RPS27L protein protein.
          Length = 113

 Score =  126 bits (303), Expect = 5e-29
 Identities = 54/68 (79%), Positives = 59/68 (86%)
 Frame = +3

Query: 75  LRSERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRA 254
           L  E++KHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+A
Sbjct: 28  LEEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKA 87

Query: 255 XLTEGCSF 278
            LTEG SF
Sbjct: 88  RLTEGISF 95


>AB007162-1|BAA25825.1|   69|Homo sapiens ribosomal protein S27
           protein.
          Length = 69

 Score =  117 bits (282), Expect = 2e-26
 Identities = 50/60 (83%), Positives = 54/60 (90%)
 Frame = +3

Query: 84  ERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRAXLT 263
           E+RKHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQPTGG+A LT
Sbjct: 10  EKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLT 69


>AL358472-18|CAI14032.1|   66|Homo sapiens ribosomal protein S27
           (metallopanstimulin 1) protein.
          Length = 66

 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 21/25 (84%), Positives = 22/25 (88%)
 Frame = +3

Query: 84  ERRKHKLKRLVPHPNSYFMDVKCPG 158
           E+RKHK KRLV  PNSYFMDVKCPG
Sbjct: 15  EKRKHKKKRLVQSPNSYFMDVKCPG 39


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,084,339
Number of Sequences: 237096
Number of extensions: 1019871
Number of successful extensions: 2473
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2473
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4042952858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)