Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_G11
         (468 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118959-1|AAM50819.1|   84|Drosophila melanogaster LD37859p pro...   140   6e-34
AE014297-3747|AAF56428.1|   84|Drosophila melanogaster CG10423-P...   140   6e-34
AY113459-1|AAM29464.1|  361|Drosophila melanogaster RE36989p pro...    29   2.4  
AE014134-864|AAF52211.2|  388|Drosophila melanogaster CG14040-PA...    29   2.4  

>AY118959-1|AAM50819.1|   84|Drosophila melanogaster LD37859p
           protein.
          Length = 84

 Score =  140 bits (340), Expect = 6e-34
 Identities = 61/68 (89%), Positives = 64/68 (94%)
 Frame = +3

Query: 84  ERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRAXLT 263
           E+RKHKLKRLV HPNSYFMDVKCPGCY+ITTVFSHAQ VVVCAGC+TILCQPTGGRA LT
Sbjct: 15  EKRKHKLKRLVQHPNSYFMDVKCPGCYRITTVFSHAQGVVVCAGCATILCQPTGGRAKLT 74

Query: 264 EGCSFXRK 287
           EGCSF RK
Sbjct: 75  EGCSFRRK 82


>AE014297-3747|AAF56428.1|   84|Drosophila melanogaster CG10423-PA
           protein.
          Length = 84

 Score =  140 bits (340), Expect = 6e-34
 Identities = 61/68 (89%), Positives = 64/68 (94%)
 Frame = +3

Query: 84  ERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRAXLT 263
           E+RKHKLKRLV HPNSYFMDVKCPGCY+ITTVFSHAQ VVVCAGC+TILCQPTGGRA LT
Sbjct: 15  EKRKHKLKRLVQHPNSYFMDVKCPGCYRITTVFSHAQGVVVCAGCATILCQPTGGRAKLT 74

Query: 264 EGCSFXRK 287
           EGCSF RK
Sbjct: 75  EGCSFRRK 82


>AY113459-1|AAM29464.1|  361|Drosophila melanogaster RE36989p
           protein.
          Length = 361

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 320 YLILRFFFQLYNGVIFFKFTTMDPSXHY 403
           Y++  F + LYN + F    T DP+ +Y
Sbjct: 88  YMVPAFLYCLYNNLAFVNLATFDPTTYY 115


>AE014134-864|AAF52211.2|  388|Drosophila melanogaster CG14040-PA
           protein.
          Length = 388

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 320 YLILRFFFQLYNGVIFFKFTTMDPSXHY 403
           Y++  F + LYN + F    T DP+ +Y
Sbjct: 88  YMVPAFLYCLYNNLAFVNLATFDPTTYY 115


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,291,056
Number of Sequences: 53049
Number of extensions: 289473
Number of successful extensions: 714
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 714
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1580609772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)