Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_G05
         (648 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0781 - 21157715-21157783,21158869-21159087,21161181-211613...    30   1.4  
02_05_0181 - 26522849-26522932,26523053-26523184,26523263-265233...    29   3.2  
11_03_0038 - 9142692-9143083,9143665-9143686,9143763-9143806,914...    28   5.6  
06_03_1071 + 27360824-27360994,27361264-27361337,27361431-273614...    28   7.4  
01_06_0865 - 32567145-32568003,32568123-32568846,32569067-32569151     27   9.7  

>08_02_0781 -
           21157715-21157783,21158869-21159087,21161181-21161329,
           21161694-21161932,21162045-21162229
          Length = 286

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = +2

Query: 449 PLLSEKEIALARRNSGGGTVYHDRGNLNITFFAPR 553
           P+L +K + + RR SGGGTV  D+G +  TF   +
Sbjct: 72  PVLRDK-VPVIRRFSGGGTVIVDQGTVFATFICSK 105


>02_05_0181 -
           26522849-26522932,26523053-26523184,26523263-26523329,
           26523800-26524186,26524259-26524360,26524983-26525132,
           26525552-26525636,26525743-26525769,26525858-26526116,
           26526659-26526751,26526921-26527013,26527122-26527289,
           26527436-26527594,26528214-26528273,26528392-26528487
          Length = 653

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -2

Query: 236 RPLCWMPQHCLYMFSVQDQQMCKHCWI 156
           RP  W+P  C Y+F  +DQQ CK  W+
Sbjct: 120 RPSPWVP--CEYIFGHKDQQTCK-TWV 143


>11_03_0038 -
           9142692-9143083,9143665-9143686,9143763-9143806,
           9143959-9144133
          Length = 210

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
 Frame = +1

Query: 37  SVQNLFVXLFFFPSCAA---HLAVKXPLTQQVQAGSS 138
           ++Q + + +FFFP+C A   H+  K P       GSS
Sbjct: 73  TMQMVHLTVFFFPACVALDRHIDAKTPAVTAADGGSS 109


>06_03_1071 +
           27360824-27360994,27361264-27361337,27361431-27361485,
           27361788-27361838,27361935-27362008,27362086-27362134,
           27362620-27362704,27362812-27362868,27363001-27363044
          Length = 219

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 15/55 (27%), Positives = 23/55 (41%)
 Frame = +3

Query: 33  QFSSKSFCQXLLFSFMCCSSRCQKXINATSASWLKLWCKAXYPAVLAHLLVLHRK 197
           +F +K  C    F   C      + +  T   WL  WC+  Y ++ A   +L RK
Sbjct: 158 RFGAK-ICLLTSFRDTCLIEIVPRDVTPTRELWLSFWCEVHYNSLYATDDLLTRK 211


>01_06_0865 - 32567145-32568003,32568123-32568846,32569067-32569151
          Length = 555

 Score = 27.5 bits (58), Expect = 9.7
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +3

Query: 267 RGRSPSQCSCLNRLIFIRTWLWRIGCIXTWTSQIIM 374
           +G   S C C NR++ + T++ R  C    T+ I M
Sbjct: 261 QGSDSSACPCSNRIMALITFVHRSSCPLRTTTMITM 296


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,261,626
Number of Sequences: 37544
Number of extensions: 326758
Number of successful extensions: 664
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 663
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)