Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_G04
(626 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62913 Cluster: 60S ribosomal protein L11; n=156; Eukar... 297 1e-79
UniRef50_P42794 Cluster: 60S ribosomal protein L11-2; n=38; Euka... 257 2e-67
UniRef50_P0C0W9 Cluster: 60S ribosomal protein L11-A; n=25; Euka... 251 1e-65
UniRef50_UPI000155375A Cluster: PREDICTED: similar to ribosomal ... 223 2e-57
UniRef50_A0DI11 Cluster: Chromosome undetermined scaffold_51, wh... 186 5e-46
UniRef50_UPI00015BB1AB Cluster: LSU ribosomal protein L5P; n=1; ... 146 4e-34
UniRef50_O28367 Cluster: 50S ribosomal protein L5P; n=1; Archaeo... 144 2e-33
UniRef50_Q9YF87 Cluster: 50S ribosomal protein L5P; n=20; Archae... 142 5e-33
UniRef50_A3H987 Cluster: Ribosomal protein L5; n=1; Caldivirga m... 137 2e-31
UniRef50_Q74N79 Cluster: 50S ribosomal protein L5P; n=1; Nanoarc... 137 2e-31
UniRef50_Q6LXE0 Cluster: 50S ribosomal protein L5P; n=7; Euryarc... 132 7e-30
UniRef50_Q8PV37 Cluster: 50S ribosomal protein L5P; n=6; Methano... 126 3e-28
UniRef50_Q46GA8 Cluster: 50S ribosomal protein L5P; n=3; Methano... 126 4e-28
UniRef50_A7DSY1 Cluster: Ribosomal protein L5; n=1; Candidatus N... 126 6e-28
UniRef50_Q673R5 Cluster: Ribosomal protein L5/L11; n=2; environm... 124 2e-27
UniRef50_A5UL75 Cluster: Ribosomal protein L5p; n=1; Methanobrev... 123 3e-27
UniRef50_A0RVY6 Cluster: Ribosomal protein L5; n=1; Cenarchaeum ... 123 3e-27
UniRef50_Q6L1B4 Cluster: 50S ribosomal protein L5P; n=4; Thermop... 122 7e-27
UniRef50_P14124 Cluster: 50S ribosomal protein L5P; n=5; Halobac... 116 5e-25
UniRef50_Q6CKT5 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 113 3e-24
UniRef50_Q3LWF5 Cluster: Ribosomal protein L11; n=1; Bigelowiell... 105 1e-21
UniRef50_Q01C63 Cluster: Chromosome 03 contig 1, DNA sequence; n... 79 7e-14
UniRef50_P38517 Cluster: 50S ribosomal protein L5; n=18; cellula... 64 3e-09
UniRef50_Q9HWE7 Cluster: 50S ribosomal protein L5; n=187; Bacter... 63 6e-09
UniRef50_Q7VQD6 Cluster: 50S ribosomal protein L5; n=4; Bacteria... 60 4e-08
UniRef50_Q7R5U0 Cluster: GLP_81_173473_174138; n=1; Giardia lamb... 58 2e-07
UniRef50_A6PPX3 Cluster: 50S ribosomal protein L5; n=1; Victival... 58 2e-07
UniRef50_Q4FLN0 Cluster: 50S ribosomal protein L5; n=3; Bacteria... 56 5e-07
UniRef50_Q6A6N8 Cluster: 50S ribosomal protein L5; n=125; Bacter... 56 7e-07
UniRef50_Q6YR10 Cluster: 50S ribosomal protein L5; n=22; Bacteri... 54 4e-06
UniRef50_Q6AP59 Cluster: 50S ribosomal protein L5; n=77; Bacteri... 52 1e-05
UniRef50_P73308 Cluster: 50S ribosomal protein L5; n=227; cellul... 52 1e-05
UniRef50_Q9G893 Cluster: Ribosomal protein L5; n=1; Malawimonas ... 51 2e-05
UniRef50_Q6B8W5 Cluster: Chloroplast 50S ribosomal protein L5; n... 51 2e-05
UniRef50_Q1ACG2 Cluster: Chloroplast 50S ribosomal protein L5; n... 51 3e-05
UniRef50_O04603 Cluster: 50S ribosomal protein L5, chloroplast p... 48 2e-04
UniRef50_Q30TV2 Cluster: 50S ribosomal protein L5; n=2; Epsilonp... 46 6e-04
UniRef50_A5CCK0 Cluster: 50S ribosomal protein L5; n=1; Orientia... 46 7e-04
UniRef50_Q2GEC7 Cluster: 50S ribosomal protein L5; n=1; Neoricke... 45 0.001
UniRef50_A5KRR2 Cluster: 50S ribosomal protein L5; n=1; candidat... 44 0.002
UniRef50_P49547 Cluster: Chloroplast 50S ribosomal protein L5; n... 44 0.003
UniRef50_A3GUR6 Cluster: 50S ribosomal protein L5; n=1; Vibrio c... 44 0.004
UniRef50_Q2EEW3 Cluster: Ribosomal protein L5; n=1; Helicosporid... 43 0.005
UniRef50_Q6KI43 Cluster: 50S ribosomal protein L5; n=12; Bacteri... 43 0.005
UniRef50_P56033 Cluster: 50S ribosomal protein L5; n=6; Bacteria... 43 0.005
UniRef50_O21252 Cluster: Mitochondrial 60S ribosomal protein L5;... 42 0.009
UniRef50_Q42196 Cluster: 60S ribosomal protein L11; n=1; Arabido... 41 0.021
UniRef50_A7CZB2 Cluster: Ribosomal protein L5; n=1; Opitutaceae ... 40 0.049
UniRef50_A7P1Q7 Cluster: Chromosome chr19 scaffold_4, whole geno... 38 0.20
UniRef50_P46749 Cluster: Mitochondrial 60S ribosomal protein L5;... 38 0.26
UniRef50_Q9G4D4 Cluster: Ribosomal protein L5; n=1; Thraustochyt... 34 3.2
UniRef50_Q61E12 Cluster: Putative uncharacterized protein CBG122... 34 3.2
UniRef50_Q1MDG2 Cluster: Conserved hypothetical exported protein... 33 7.4
UniRef50_Q9MAT2 Cluster: F13M7.17; n=1; Arabidopsis thaliana|Rep... 32 9.8
>UniRef50_P62913 Cluster: 60S ribosomal protein L11; n=156;
Eukaryota|Rep: 60S ribosomal protein L11 - Homo sapiens
(Human)
Length = 178
Score = 297 bits (729), Expect = 1e-79
Identities = 138/167 (82%), Positives = 151/167 (90%)
Frame = +1
Query: 118 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 297
+N MR L IRKLCLNICVGESGDRLTRAAKVLEQLTGQ PVFSKARYTVRSFGIRRNEKI
Sbjct: 9 ENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTVRSFGIRRNEKI 68
Query: 298 AVHCTVRGAKAXXILXRGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGL 477
AVHCTVRGAKA IL +GLKVREYELR++NFS TGNFGFGIQEHIDLGIKYDPSIGIYGL
Sbjct: 69 AVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGFGIQEHIDLGIKYDPSIGIYGL 128
Query: 478 DFYVVLGRPGFNVXHRXRKTXKVGFPHRLTKEDAXKWFQQKYDGIIL 618
DFYVVLGRPGF++ + R+T +G HR++KE+A +WFQQKYDGIIL
Sbjct: 129 DFYVVLGRPGFSIADKKRRTGCIGAKHRISKEEAMRWFQQKYDGIIL 175
>UniRef50_P42794 Cluster: 60S ribosomal protein L11-2; n=38;
Eukaryota|Rep: 60S ribosomal protein L11-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 182
Score = 257 bits (629), Expect = 2e-67
Identities = 122/167 (73%), Positives = 138/167 (82%)
Frame = +1
Query: 121 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIA 300
N MR++ ++KL LNI VGESGDRLTRA+KVLEQL+GQ PVFSKARYTVRSFGIRRNEKIA
Sbjct: 9 NPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIA 68
Query: 301 VHCTVRGAKAXXILXRGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLD 480
+ TVRG KA +L GLKV+EYEL R NFS TG FGFGIQEHIDLGIKYDPS GIYG+D
Sbjct: 69 CYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDLGIKYDPSTGIYGMD 128
Query: 481 FYVVLGRPGFNVXHRXRKTXKVGFPHRLTKEDAXKWFQQKYDGIILN 621
FYVVL RPG+ V R R +VG HR+TK+DA KWFQ KY+G+ILN
Sbjct: 129 FYVVLERPGYRVARRRRCKTRVGIQHRVTKDDAMKWFQVKYEGVILN 175
>UniRef50_P0C0W9 Cluster: 60S ribosomal protein L11-A; n=25;
Eukaryota|Rep: 60S ribosomal protein L11-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 174
Score = 251 bits (614), Expect = 1e-65
Identities = 121/169 (71%), Positives = 136/169 (80%)
Frame = +1
Query: 115 SKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEK 294
++N MR+L I KL LNI VGESGDRLTRA+KVLEQL+GQ PV SKARYTVR+FGIRRNEK
Sbjct: 5 AQNPMRDLKIEKLVLNISVGESGDRLTRASKVLEQLSGQTPVQSKARYTVRTFGIRRNEK 64
Query: 295 IAVHCTVRGAKAXXILXRGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYG 474
IAVH TVRG KA IL RGLKV+EY+LR NFSATGNFGFGI EHIDLGIKYDPSIGI+G
Sbjct: 65 IAVHVTVRGPKAEEILERGLKVKEYQLRDRNFSATGNFGFGIDEHIDLGIKYDPSIGIFG 124
Query: 475 LDFYVVLGRPGFNVXHRXRKTXKVGFPHRLTKEDAXKWFQQKYDGIILN 621
+DFYVV+ RPG V R R VG H+ TKED WF+QKYD +L+
Sbjct: 125 MDFYVVMNRPGARVTRRKRCKGTVGNSHKTTKEDTVSWFKQKYDADVLD 173
>UniRef50_UPI000155375A Cluster: PREDICTED: similar to ribosomal
protein L11; n=1; Mus musculus|Rep: PREDICTED: similar
to ribosomal protein L11 - Mus musculus
Length = 279
Score = 223 bits (546), Expect = 2e-57
Identities = 103/132 (78%), Positives = 116/132 (87%)
Frame = +1
Query: 223 TGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAXXILXRGLKVREYELRRDNFSATG 402
+GQ PV SKARYTVRSFGIRRNEKIAVHCTVRGAKA IL +GLKVREYELR++NFS TG
Sbjct: 98 SGQAPVESKARYTVRSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTG 157
Query: 403 NFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFNVXHRXRKTXKVGFPHRLTKEDAX 582
NFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGR GF++ + R+T +G HR++KE+A
Sbjct: 158 NFGFGIQEHIDLGIKYDPSIGIYGLDFYVVLGRSGFSIADKKRRTGCIGAKHRISKEEAM 217
Query: 583 KWFQQKYDGIIL 618
+WFQQKY GIIL
Sbjct: 218 RWFQQKYAGIIL 229
>UniRef50_A0DI11 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_51,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 197
Score = 186 bits (452), Expect = 5e-46
Identities = 90/133 (67%), Positives = 107/133 (80%), Gaps = 2/133 (1%)
Frame = +1
Query: 109 DNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 288
+ +NVMR + I KL ++IC GESGD+LT+AAKVLE LTGQ+PVF KARYTVRSFGIRRN
Sbjct: 33 ETKENVMRKIRIEKLMVHICAGESGDKLTKAAKVLEDLTGQKPVFGKARYTVRSFGIRRN 92
Query: 289 EKIAVHCTVRGAKAXXILXRGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGI 468
EKI+V CT+RG +A IL RGL+V+E EL++ NFS +GNFGFGIQEHIDLG+KYDP GI
Sbjct: 93 EKISVFCTIRGDQARDILVRGLRVKEMELKKRNFSESGNFGFGIQEHIDLGLKYDPYTGI 152
Query: 469 --YGLDFYVVLGR 501
YGL VV R
Sbjct: 153 FRYGLLCCVVKTR 165
>UniRef50_UPI00015BB1AB Cluster: LSU ribosomal protein L5P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L5P - Ignicoccus hospitalis KIN4/I
Length = 198
Score = 146 bits (354), Expect = 4e-34
Identities = 67/155 (43%), Positives = 104/155 (67%), Gaps = 1/155 (0%)
Frame = +1
Query: 142 IRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRG 321
+ K+ +NI +GESG+RL +A +LE+LTGQ+PV KA+ T+R FGIRR E IAV T+RG
Sbjct: 38 LAKVTVNIALGESGERLEKAYNLLEELTGQRPVKRKAKKTIRQFGIRRGENIAVMVTLRG 97
Query: 322 AKAXXILXRGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDFYVVLG 498
+A L + L+ ++++ +F GN GFGI+EHI + G +YDP +GI+G+D + +
Sbjct: 98 QRAVEFLKKALEAVGWKIKASSFDEFGNVGFGIREHIQIPGTRYDPRVGIFGMDVILTIE 157
Query: 499 RPGFNVXHRXRKTXKVGFPHRLTKEDAXKWFQQKY 603
RPG+ V R R K+ HR+TKE++ + +++
Sbjct: 158 RPGYRVARRRRARSKIPRRHRVTKEESMVFLAKEF 192
>UniRef50_O28367 Cluster: 50S ribosomal protein L5P; n=1;
Archaeoglobus fulgidus|Rep: 50S ribosomal protein L5P -
Archaeoglobus fulgidus
Length = 178
Score = 144 bits (349), Expect = 2e-33
Identities = 71/161 (44%), Positives = 101/161 (62%), Gaps = 1/161 (0%)
Frame = +1
Query: 115 SKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEK 294
++N MR + + K+ +NI VGESG+R +A +LE+L Q+P + A+ T+++FGIR+ E
Sbjct: 12 NENPMREVVLDKVVINIGVGESGERHKKAYSLLEELVEQKPAITYAKMTIKNFGIRKGEA 71
Query: 295 IAVHCTVRGAKAXXILXRGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIY 471
I + T+RG KA L L V+E L R + G F FGI EHIDL G+ YDP +GI+
Sbjct: 72 IGIKVTLRGEKALKFLKDALTVKENRLSRKSI-GEGYFAFGIAEHIDLPGVDYDPDVGIF 130
Query: 472 GLDFYVVLGRPGFNVXHRXRKTXKVGFPHRLTKEDAXKWFQ 594
G+D V L R G+ V R RK K+ HR+TKED +W +
Sbjct: 131 GMDVCVSLKRRGYRVARRRRKKAKIATSHRVTKEDTIRWLE 171
>UniRef50_Q9YF87 Cluster: 50S ribosomal protein L5P; n=20;
Archaea|Rep: 50S ribosomal protein L5P - Aeropyrum
pernix
Length = 192
Score = 142 bits (345), Expect = 5e-33
Identities = 70/164 (42%), Positives = 104/164 (63%), Gaps = 2/164 (1%)
Frame = +1
Query: 118 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 297
++ MR I K+ +NI +G+SG+RL RAA+VLE+LTGQ+PVF KA+ T+R+FG+R+ E I
Sbjct: 24 RSPMRRPRIVKVTVNISIGQSGERLQRAAEVLEELTGQKPVFRKAKRTIRAFGVRKGENI 83
Query: 298 AVHCTVRGAKAXXILXRGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYG 474
AV T+RG KA L R L + ++ + GN FGI+EHI + G+KYDP +GI G
Sbjct: 84 AVMVTLRGEKALNFLKRALDAVGHRIKTSSIDEHGNVSFGIEEHILIPGVKYDPRVGILG 143
Query: 475 LDFYVVLGRPGFNVXHRXR-KTXKVGFPHRLTKEDAXKWFQQKY 603
+D + + RPG + R R + + HR+T+E+ Q +
Sbjct: 144 MDVAITIQRPGHRIVERRRQRRGHIPRRHRVTREETMVLLNQLF 187
>UniRef50_A3H987 Cluster: Ribosomal protein L5; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L5 -
Caldivirga maquilingensis IC-167
Length = 197
Score = 137 bits (332), Expect = 2e-31
Identities = 67/157 (42%), Positives = 103/157 (65%), Gaps = 1/157 (0%)
Frame = +1
Query: 127 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 306
MR + I + +N+ +G+SG+RL +AAKV+ +LTG+ P + A +++ FGIRR E I +
Sbjct: 32 MRRIFIWSVAVNMGIGQSGERLEKAAKVMSELTGRTPSYRLAHKSIKDFGIRRGEPIGLL 91
Query: 307 CTVRGAKAXXILXRGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDF 483
T+R +A L R L ++ LR ++F+A GN FGI+EHI + G +YDP++GI+G D
Sbjct: 92 VTLRRNEAVWFLLRALAAVDFTLREESFNA-GNVSFGIREHILVPGSRYDPALGIFGFDV 150
Query: 484 YVVLGRPGFNVXHRXRKTXKVGFPHRLTKEDAXKWFQ 594
V L RPGF V +R R VG HR+++E+ ++FQ
Sbjct: 151 AVTLARPGFRVQYRRRARADVGKDHRVSREETIRFFQ 187
>UniRef50_Q74N79 Cluster: 50S ribosomal protein L5P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L5P -
Nanoarchaeum equitans
Length = 169
Score = 137 bits (332), Expect = 2e-31
Identities = 73/160 (45%), Positives = 105/160 (65%), Gaps = 2/160 (1%)
Frame = +1
Query: 127 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 306
MR + I K+ LNI VGESG++L +A ++L++LTGQ+PV +KA+ V + IR I V
Sbjct: 5 MRKIRIEKVTLNIGVGESGEKLDKAYELLKRLTGQKPVKTKAKVRVEQWHIRPGLPIGVK 64
Query: 307 CTVRGAKAXXIL-XRGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLD 480
T+RG KA IL + L +++++ +F+ G FGFGI E+I + G+KYDP +G+ GL+
Sbjct: 65 VTLRGEKAYKILKEKLLPAVDFKIKASSFTDRG-FGFGIPEYIMIPGMKYDPELGLIGLE 123
Query: 481 FYVVLGRPGFNVXHRXRKTXKVGFPHRLTKEDAXKWFQQK 600
YV L RPG+ V R K KVG HRL KE+ KW Q++
Sbjct: 124 AYVTLERPGYRVERRRIKRSKVGSRHRLNKEEIIKWAQEE 163
>UniRef50_Q6LXE0 Cluster: 50S ribosomal protein L5P; n=7;
Euryarchaeota|Rep: 50S ribosomal protein L5P -
Methanococcus maripaludis
Length = 181
Score = 132 bits (319), Expect = 7e-30
Identities = 71/167 (42%), Positives = 97/167 (58%), Gaps = 4/167 (2%)
Frame = +1
Query: 118 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 297
K M+ I+K+ +N VGE+GDRLT AKV+E+LTGQ PV + A+ T +FGIR+ I
Sbjct: 9 KEPMKKPRIQKVTVNFGVGEAGDRLTIGAKVIEELTGQSPVRTLAKQTNPAFGIRKKLPI 68
Query: 298 AVHCTVRGAKAXXILXR---GLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIG 465
+ T+RG KA L K L +F GNF FG+ EHID G KYDPS+G
Sbjct: 69 GLKVTLRGKKAEEFLKNAFTAFKACGKTLFASSFDQVGNFSFGVPEHIDFPGQKYDPSVG 128
Query: 466 IYGLDFYVVLGRPGFNVXHRXRKTXKVGFPHRLTKEDAXKWFQQKYD 606
IYG+D V + G+ V R K + H +TK++A ++ Q K+D
Sbjct: 129 IYGMDICVTFEKSGYRVKSRKVKRSHIPEKHLVTKDEAIEYIQAKFD 175
>UniRef50_Q8PV37 Cluster: 50S ribosomal protein L5P; n=6;
Methanomicrobia|Rep: 50S ribosomal protein L5P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 169
Score = 126 bits (305), Expect = 3e-28
Identities = 63/162 (38%), Positives = 96/162 (59%), Gaps = 1/162 (0%)
Frame = +1
Query: 121 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIA 300
N MR + K+ +++ VGESG L A ++L+ +TGQ+ V A+ T+ +F I++NE I
Sbjct: 3 NPMRTPMVEKVIVHMGVGESGQHLVNAEEILKTITGQEVVRCFAKRTLPAFSIKKNEPIG 62
Query: 301 VHCTVRGAKAXXILXRGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGL 477
T+RG +A L ++ E L R F + GN FGI+EH D G++YDP+IG++G+
Sbjct: 63 CKVTLRGQRAQEFLGTSFEIIEKTLSRAQFDSLGNVSFGIEEHTDFPGMRYDPNIGVFGM 122
Query: 478 DFYVVLGRPGFNVXHRXRKTXKVGFPHRLTKEDAXKWFQQKY 603
D VVL RPG + R T K+ HR+T +DA + + Y
Sbjct: 123 DVTVVLKRPGERICKRRIATRKIPTDHRVTVDDAIAFLNESY 164
>UniRef50_Q46GA8 Cluster: 50S ribosomal protein L5P; n=3;
Methanomicrobia|Rep: 50S ribosomal protein L5P -
Methanosarcina barkeri (strain Fusaro / DSM 804)
Length = 169
Score = 126 bits (304), Expect = 4e-28
Identities = 64/162 (39%), Positives = 95/162 (58%), Gaps = 1/162 (0%)
Frame = +1
Query: 121 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIA 300
NVMR + K+ +++ VGESG L A ++L +TGQ+ V A+ T+ +F I++NE I
Sbjct: 3 NVMRTPVVEKVIVHMGVGESGQHLVDAEEILRNITGQEVVRCFAKRTLPAFSIKKNEPIG 62
Query: 301 VHCTVRGAKAXXILXRGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGL 477
T+RG +A L L + + L R F + GN FGI+EH D G+KYDP+IG++G+
Sbjct: 63 CKVTLRGQRAQQFLETALGIVDKTLVRSQFDSLGNVSFGIEEHTDFPGMKYDPNIGVFGM 122
Query: 478 DFYVVLGRPGFNVXHRXRKTXKVGFPHRLTKEDAXKWFQQKY 603
D VV+ RPG + R T K+ HR+T ED+ + Y
Sbjct: 123 DVTVVIKRPGERICKRRIATRKIPTNHRVTLEDSIAFLNDSY 164
>UniRef50_A7DSY1 Cluster: Ribosomal protein L5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 173
Score = 126 bits (303), Expect = 6e-28
Identities = 61/164 (37%), Positives = 101/164 (61%), Gaps = 1/164 (0%)
Frame = +1
Query: 115 SKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEK 294
+++ M+ + + K+ LN+ VG+SGD + A++ LEQ++G++P A+ T R +G+R+ E
Sbjct: 5 TESPMKKISLEKVVLNMGVGKSGDVIEIASRALEQISGKKPSARNAKETQRDWGVRKGEP 64
Query: 295 IAVHCTVRGAKAXXILXRGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIY 471
I V T+RG A +L R L+ + + F GN+ FGI+EHID+ G+KY+PSIGI
Sbjct: 65 IGVAVTIRGDDAKALLKRLLEAKGNTVNGRAFDNFGNYSFGIREHIDIPGVKYEPSIGIL 124
Query: 472 GLDFYVVLGRPGFNVXHRXRKTXKVGFPHRLTKEDAXKWFQQKY 603
GL V L RPG+ + R + VG H +T ++A + +++
Sbjct: 125 GLGISVTLTRPGYGIRTRSKHKASVGKSHIITSQEAKDYLVKEF 168
>UniRef50_Q673R5 Cluster: Ribosomal protein L5/L11; n=2;
environmental samples|Rep: Ribosomal protein L5/L11 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 168
Score = 124 bits (298), Expect = 2e-27
Identities = 68/156 (43%), Positives = 88/156 (56%), Gaps = 2/156 (1%)
Frame = +1
Query: 142 IRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRG 321
I K+ +NI VGE G RL A +VLE LTG +P+ + +R T R G R I T+R
Sbjct: 6 ITKVTVNIGVGEGGSRLQLAERVLELLTGLKPIRTISRMTNRDLGTRLGAPIGCKVTIRD 65
Query: 322 A-KAXXILXRGLKVREYELRRDNFSATGNFGFGIQEHIDLGI-KYDPSIGIYGLDFYVVL 495
A K L VRE L NF +GN FGI ++ D KYDP IGIYG+D VVL
Sbjct: 66 ADKVQSFLKDAFWVRENTLPSYNFDQSGNLSFGIADYTDFPAQKYDPDIGIYGMDVNVVL 125
Query: 496 GRPGFNVXHRXRKTXKVGFPHRLTKEDAXKWFQQKY 603
RPG V R R+ KVG HR+ K+++ WF+ ++
Sbjct: 126 ERPGHRVSRRRRRGVKVGVEHRVGKDESKAWFKDQF 161
>UniRef50_A5UL75 Cluster: Ribosomal protein L5p; n=1;
Methanobrevibacter smithii ATCC 35061|Rep: Ribosomal
protein L5p - Methanobrevibacter smithii (strain PS /
ATCC 35061 / DSM 861)
Length = 170
Score = 123 bits (297), Expect = 3e-27
Identities = 61/163 (37%), Positives = 98/163 (60%), Gaps = 1/163 (0%)
Frame = +1
Query: 121 NVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIA 300
N M + I K ++I VGE+G++L+RA +LEQ+ Q PV + ++ T FGIR+ + IA
Sbjct: 2 NPMNEVQISKATVSIGVGEAGEKLSRAITLLEQMFDQTPVKTFSKVTNPEFGIRKRQPIA 61
Query: 301 VHCTVRGAKAXXILXRGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGL 477
T+RG KA + L+ ++ F A GN FGI+EHID+ G+KY+P IGI+G+
Sbjct: 62 CKLTLRGEKADKAIEMVLEGINKNIKPTQFDAQGNLSFGIKEHIDIPGMKYNPDIGIFGM 121
Query: 478 DFYVVLGRPGFNVXHRXRKTXKVGFPHRLTKEDAXKWFQQKYD 606
+ V +PG+ + R + KV HR++KE+ K+ + ++
Sbjct: 122 NVSVTFEKPGYRIAKRRIQQKKVPAKHRISKEETMKYMEDNFN 164
>UniRef50_A0RVY6 Cluster: Ribosomal protein L5; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L5 - Cenarchaeum
symbiosum
Length = 169
Score = 123 bits (297), Expect = 3e-27
Identities = 60/160 (37%), Positives = 95/160 (59%), Gaps = 1/160 (0%)
Frame = +1
Query: 127 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 306
MR + + K+ LN+ VG+SG+ + A + L +++G++P A T R FG+R+ E I
Sbjct: 5 MRKITLEKVVLNMGVGQSGNAVEVAKRALGEISGKKPCGRDAHETQRDFGVRKGEPIGAA 64
Query: 307 CTVRGAKAXXILXRGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDF 483
T+RG A + R + + +++ +F GNF FGI EHID+ GIKYDP IGI GLD
Sbjct: 65 VTIRGEDAGALARRLFEAKGGQVKGRSFDDFGNFSFGIGEHIDIPGIKYDPGIGILGLDV 124
Query: 484 YVVLGRPGFNVXHRXRKTXKVGFPHRLTKEDAXKWFQQKY 603
+ L RPG+ + R + +VG HR+T +A + +++
Sbjct: 125 CMTLSRPGYGIRKRSKHKARVGRSHRITATEAKDFVVREF 164
>UniRef50_Q6L1B4 Cluster: 50S ribosomal protein L5P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L5P -
Picrophilus torridus
Length = 176
Score = 122 bits (294), Expect = 7e-27
Identities = 64/168 (38%), Positives = 98/168 (58%), Gaps = 2/168 (1%)
Frame = +1
Query: 109 DNSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 288
+ ++N MR + I K+ +NI VG +G+RL RAAKVLE LT +P F+ A+ TVR F IR+
Sbjct: 3 ETTENSMREIVIDKVVVNIGVGAAGERLNRAAKVLELLTHHKPAFTSAKRTVRDFNIRKG 62
Query: 289 EKIAVHCTVRGAKAXXILXRGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIG 465
I V T+R A L ++Y++ +F GN FGI ++ D G+KYDP IG
Sbjct: 63 LNIGVKVTLRKDDALSFLKEAFYAKDYKIPVYSFDKNGNAYFGISDYTDFKGMKYDPDIG 122
Query: 466 IYGLDFYVVL-GRPGFNVXHRXRKTXKVGFPHRLTKEDAXKWFQQKYD 606
I+G+D +V R G+ + R K + R++KE+ K+ Q+ ++
Sbjct: 123 IFGMDIAIVFRRRGGYRIEKRRIKKMHIPKKMRISKEETIKYLQENFN 170
>UniRef50_P14124 Cluster: 50S ribosomal protein L5P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 177
Score = 116 bits (279), Expect = 5e-25
Identities = 63/161 (39%), Positives = 86/161 (53%), Gaps = 1/161 (0%)
Frame = +1
Query: 127 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 306
MR I K+ +++ +G G L A +L ++TGQ PV +KA+ TV F IR + I
Sbjct: 14 MREPRIEKVVVHMGIGHGGRDLANAEDILGEITGQMPVRTKAKRTVGEFDIREGDPIGAK 73
Query: 307 CTVRGAKAXXILXRGLKVREYELRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGLDF 483
T+R A L L + E L F TGNF FG++EH + +YDPSIGIYGLD
Sbjct: 74 VTLRDEMAEEFLQTALPLAE--LATSQFDDTGNFSFGVEEHTEFPSQEYDPSIGIYGLDV 131
Query: 484 YVVLGRPGFNVXHRXRKTXKVGFPHRLTKEDAXKWFQQKYD 606
V L RPG+ V R + + + HRL DA + + YD
Sbjct: 132 TVNLVRPGYRVAKRDKASRSIPTKHRLNPADAVAFIESTYD 172
>UniRef50_Q6CKT5 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 191
Score = 113 bits (272), Expect = 3e-24
Identities = 57/161 (35%), Positives = 95/161 (59%)
Frame = -3
Query: 609 TIIFLLEPLXSIFLCEAVGKSHFSCLTXSVXYVETWPAKYDVKVQSINSN*GIVLDTQVN 430
+I+ LLEP +FL V + F + S TW +V++ ++N++ +VLDTQ++
Sbjct: 10 SIVSLLEPSDGVFLGSLVRVTDFRLTSLSSGDSGTWSTHDNVEIHTVNTDTWVVLDTQID 69
Query: 429 VFLNTEAKITRGGEVVTPQFIFSDFQTPXKDXXCFSSSDCTMDSNLFITTDTKRPHCIPS 250
VFL+TE ++T EV Q +F D QT +D +++ +DSNLF+++DT+ + S
Sbjct: 70 VFLDTETEVTGSREVSVSQLVFLDLQTSFQDFFSLWTTNSNVDSNLFVSSDTESSDSVSS 129
Query: 249 LGKYRLLSCELLQHLGGTSQPVTGFTNTDVQAKLSDMKIPH 127
LG L+ +L Q+LG + Q VT FTN ++Q + D++ H
Sbjct: 130 LGLNWSLTRQLFQNLGSSGQSVTRFTNRNIQDQFLDLQFTH 170
>UniRef50_Q3LWF5 Cluster: Ribosomal protein L11; n=1; Bigelowiella
natans|Rep: Ribosomal protein L11 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 139
Score = 105 bits (251), Expect = 1e-21
Identities = 47/130 (36%), Positives = 80/130 (61%)
Frame = +1
Query: 127 MRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVH 306
M+ + + KL L+I VG SG L +++K+L++++ Q P F A+ T+++F IRR E I+
Sbjct: 1 MKQIFLNKLILSIDVGSSGSNLYKSSKLLKKISLQFPSFGMAKRTIKTFSIRRGEYISCF 60
Query: 307 CTVRGAKAXXILXRGLKVREYELRRDNFSATGNFGFGIQEHIDLGIKYDPSIGIYGLDFY 486
C++ K L + LK++ + + NFS T FG GI +H++LG +D IGI+G++
Sbjct: 61 CSLSKKKGILFLYKMLKLKTFTINESNFSLTSTFGIGISDHLELGYNFDQKIGIHGINII 120
Query: 487 VVLGRPGFNV 516
L R G+ +
Sbjct: 121 GDLSRRGYRI 130
>UniRef50_Q01C63 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 363
Score = 79.4 bits (187), Expect = 7e-14
Identities = 48/166 (28%), Positives = 86/166 (51%), Gaps = 1/166 (0%)
Frame = -3
Query: 621 IKYDTIIFLLEPLXSIFLCEAVGKSHFSCLTXSVXYVETWPAKYDVKVQSINSN*GIVLD 442
++ D + LLEP I L + V + L ++DV++ +++ +VLD
Sbjct: 35 VQDDALERLLEPSHRISLGKLVLLTDLLLLLTPAVDSVARALQHDVEIHTVDPCGRVVLD 94
Query: 441 TQVNVFLNTEAKITRGGEVVTPQFIFSDFQTPXKDXX-CFSSSDCTMDSNLFITTDTKRP 265
+VNVF +TE ++TRG EV +F F + ++ ++ + +LF+T + +R
Sbjct: 95 AEVNVFADTETEVTRGAEVALEEFEFLHLEPALQNLHRLVPVTNGDVRGDLFVTANAERA 154
Query: 264 HCIPSLGKYRLLSCELLQHLGGTSQPVTGFTNTDVQAKLSDMKIPH 127
H + LG+ RLL+ +LLQHL + +T N +V+ +L + PH
Sbjct: 155 HGVARLGEDRLLTGQLLQHLRRLREAITALANANVEHELVNADRPH 200
>UniRef50_P38517 Cluster: 50S ribosomal protein L5; n=18; cellular
organisms|Rep: 50S ribosomal protein L5 - Thermotoga
maritima
Length = 184
Score = 64.1 bits (149), Expect = 3e-09
Identities = 41/137 (29%), Positives = 74/137 (54%), Gaps = 10/137 (7%)
Frame = +1
Query: 112 NSKNVMRNLHIRKLCLNICVGESG---DRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIR 282
N KN+ + + K+ +N+ +GE D + R A L ++TGQ+P+ ++AR ++ +F IR
Sbjct: 25 NYKNIHQVPKLVKIVINMGIGEGSRNYDLIERHANELAKITGQKPIVTRARKSISNFKIR 84
Query: 283 RNEKIAVHCTVRGAKAXXILXRGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-G 441
+ I + T+RGA+ L + + KVR++ L ++F GN+ FG+ E +
Sbjct: 85 KGMPIGLKVTLRGARMYNFLYKLINIVLPKVRDFRGLDPNSFDGRGNYSFGLSEQLVFPE 144
Query: 442 IKYDPSIGIYGLDFYVV 492
+ D I G+D +V
Sbjct: 145 LNPDEVRRIQGMDITIV 161
>UniRef50_Q9HWE7 Cluster: 50S ribosomal protein L5; n=187;
Bacteria|Rep: 50S ribosomal protein L5 - Pseudomonas
aeruginosa
Length = 179
Score = 62.9 bits (146), Expect = 6e-09
Identities = 45/130 (34%), Positives = 68/130 (52%), Gaps = 10/130 (7%)
Frame = +1
Query: 121 NVMRNLHIRKLCLNICVGES-GDR--LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNE 291
NVM + K+ LN+ +GE+ GD+ + A LE++TGQ+PV + AR ++ F IR
Sbjct: 24 NVMEVPRVTKITLNMGLGEAVGDKKIIENAVADLEKITGQKPVVTYARKSIAGFKIREGW 83
Query: 292 KIAVHCTVRGAKAXXILXRGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIKY 450
I V T+R + L R L +VR++ L +F GN+ G++E I I Y
Sbjct: 84 PIGVKVTLRSDRMYEFLDRLLSISLPRVRDFRGLNAKSFDGRGNYSMGVKEQIIFPEIDY 143
Query: 451 DPSIGIYGLD 480
D + GLD
Sbjct: 144 DKIDALRGLD 153
>UniRef50_Q7VQD6 Cluster: 50S ribosomal protein L5; n=4;
Bacteria|Rep: 50S ribosomal protein L5 - Blochmannia
floridanus
Length = 190
Score = 60.1 bits (139), Expect = 4e-08
Identities = 43/134 (32%), Positives = 73/134 (54%), Gaps = 10/134 (7%)
Frame = +1
Query: 118 KNVMRNLHIRKLCLNICVGES---GDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 288
K+VM+ I K+ +++ VG+S L RA + LE ++GQ+PV +KAR ++ SF IR+
Sbjct: 23 KSVMQVPKINKITISMGVGKSIINKKFLERAIEDLEMISGQKPVITKARKSIASFKIRQG 82
Query: 289 EKIAVHCTVRGAKAXXILXRGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIK 447
++I T+R + R + ++R++ L +F GN+ GI+E I I
Sbjct: 83 QEIGCKVTLRRKRMWEFFERLISIAIPRIRDFRGLSIKSFDGYGNYTMGIREQIIFPEIN 142
Query: 448 YDPSIGIYGLDFYV 489
YD GI G++ +
Sbjct: 143 YDTIDGIRGMNITI 156
>UniRef50_Q7R5U0 Cluster: GLP_81_173473_174138; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_81_173473_174138 - Giardia lamblia
ATCC 50803
Length = 221
Score = 58.0 bits (134), Expect = 2e-07
Identities = 36/123 (29%), Positives = 62/123 (50%)
Frame = -3
Query: 495 KYDVKVQSINSN*GIVLDTQVNVFLNTEAKITRGGEVVTPQFIFSDFQTPXKDXXCFSSS 316
K V+V +I+++ +VLD ++NVF + E +++ GGE QF D + D ++
Sbjct: 76 KDHVEVHTIDTHGRVVLDPEINVFRDAEPEVSSGGEARVGQFKVLDAEAALDDLAGLFAA 135
Query: 315 DCTMDSNLFITTDTKRPHCIPSLGKYRLLSCELLQHLGGTSQPVTGFTNTDVQAKLSDMK 136
+ + +L D + LG+ RLL ELL+ L Q V ++ DV+ +L +
Sbjct: 136 NGDVCGDLLTAADPEAADGEARLGERRLLVGELLEDLSSLCQRVALSSDADVEDELLNAD 195
Query: 135 IPH 127
PH
Sbjct: 196 TPH 198
>UniRef50_A6PPX3 Cluster: 50S ribosomal protein L5; n=1; Victivallis
vadensis ATCC BAA-548|Rep: 50S ribosomal protein L5 -
Victivallis vadensis ATCC BAA-548
Length = 178
Score = 57.6 bits (133), Expect = 2e-07
Identities = 34/111 (30%), Positives = 59/111 (53%), Gaps = 8/111 (7%)
Frame = +1
Query: 118 KNVMRNLHIRKLCLNICVGESGDR--LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNE 291
KNVM+ + K+ ++ +G +R T A K + +TGQ+PV +KAR V +F +R
Sbjct: 23 KNVMQIPKLEKIVISTGIGSDAERDAFTEAKKHIGAMTGQEPVITKARKNVSNFKLRVGM 82
Query: 292 KIAVHCTVRGAKAXXILXRGL-----KVREYE-LRRDNFSATGNFGFGIQE 426
+ V T+RG++ L R + +VR++ + + F GN+ GI +
Sbjct: 83 PVGVMVTLRGSRMYEFLDRFVHNALPRVRDFRGIPKTGFDGVGNYNLGISD 133
>UniRef50_Q4FLN0 Cluster: 50S ribosomal protein L5; n=3;
Bacteria|Rep: 50S ribosomal protein L5 - Pelagibacter
ubique
Length = 184
Score = 56.4 bits (130), Expect = 5e-07
Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 10/156 (6%)
Frame = +1
Query: 118 KNVMRNLHIRKLCLNICVGESGD--RLTRAAKV-LEQLTGQQPVFSKARYTVRSFGIRRN 288
KN + K+ +N+ +G G ++ ++ + L ++TGQ+P +K + +V +F R+
Sbjct: 24 KNTYMGPKVEKVVINMGLGLDGADAKIMKSTEEDLGKITGQKPTVTKFKKSVANFKTRKG 83
Query: 289 EKIAVHCTVRGAKAXXILXRGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIK 447
+ T+RG K L R + +++++ L F GN+ FGI+EHI +
Sbjct: 84 TNAGLKVTLRGNKMYEFLDRLVNIALPRIKDFRGLSPKGFDKFGNYTFGIKEHIIFPEVN 143
Query: 448 YDPSIGIYGLDFYVVLGRPGFNVXHRXRKTXKVGFP 555
+D I GLD VV+ N H K+ FP
Sbjct: 144 FDRIDKIRGLDIVVVIS--ALNKDHSFALLEKLNFP 177
>UniRef50_Q6A6N8 Cluster: 50S ribosomal protein L5; n=125;
Bacteria|Rep: 50S ribosomal protein L5 -
Propionibacterium acnes
Length = 210
Score = 56.0 bits (129), Expect = 7e-07
Identities = 39/135 (28%), Positives = 69/135 (51%), Gaps = 10/135 (7%)
Frame = +1
Query: 118 KNVMRNLHIRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 288
+N M + K+ +N+ VG++ + A + + +TGQ+P +KAR ++ F +R
Sbjct: 32 RNPMLIPGLEKIVVNMGVGDAAHDSKVMDGAIRDITAITGQKPQVTKARKSIAQFKLREG 91
Query: 289 EKIAVHCTVRGAK----AXXILXRGL-KVREYE-LRRDNFSATGNFGFGIQEHI-DLGIK 447
+ I H T+RG + A +L L ++R++ L + F GN+ FG+ E + L I
Sbjct: 92 QPIGCHVTLRGDRMWEFADRLLTLALPRIRDFRGLNSNQFDGKGNYTFGLSEQVMFLEID 151
Query: 448 YDPSIGIYGLDFYVV 492
D + I G+D V
Sbjct: 152 QDKIVRIRGMDITFV 166
>UniRef50_Q6YR10 Cluster: 50S ribosomal protein L5; n=22;
Bacteria|Rep: 50S ribosomal protein L5 - Onion yellows
phytoplasma
Length = 181
Score = 53.6 bits (123), Expect = 4e-06
Identities = 39/137 (28%), Positives = 69/137 (50%), Gaps = 10/137 (7%)
Frame = +1
Query: 112 NSKNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQL---TGQQPVFSKARYTVRSFGIR 282
N K+VM+ + K+ +N+ VG++ + V+E+L +GQ PV +KA+ + +F +R
Sbjct: 23 NYKSVMQVPKVEKVVINMGVGDAIFNVKVLDDVVEELKLLSGQSPVITKAKKAISNFKLR 82
Query: 283 RNEKIAVHCTVRGAKAXXILXRGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-G 441
I T+RGA+ L + +VR++ + +F GN+ G++E I
Sbjct: 83 EGMPIGAKVTLRGARKEAFLCKLTRLVFPRVRDFRGISGKSFDGRGNYALGLKEQIVFPE 142
Query: 442 IKYDPSIGIYGLDFYVV 492
I D I G+D +V
Sbjct: 143 INIDKVKKIRGMDIIIV 159
>UniRef50_Q6AP59 Cluster: 50S ribosomal protein L5; n=77;
Bacteria|Rep: 50S ribosomal protein L5 - Desulfotalea
psychrophila
Length = 179
Score = 52.0 bits (119), Expect = 1e-05
Identities = 40/134 (29%), Positives = 66/134 (49%), Gaps = 10/134 (7%)
Frame = +1
Query: 121 NVMRNLHIRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNE 291
N M+ I K+ LN+ +GE+ + AA+ L ++ GQ+ V +KA+ ++ +F +R
Sbjct: 24 NPMQIPKIEKIVLNMGLGEAVQNPKIVEGAAEELTKIAGQRAVVTKAKKSIATFKLREGM 83
Query: 292 KIAVHCTVRGAKAXXILXRGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIKY 450
I T+RG K L + + +VR++ + F GN+ GIQE I I Y
Sbjct: 84 PIGCRVTLRGEKMYDFLSKLVNIALPRVRDFRGVSPKGFDGRGNYSMGIQEQIIFPEIDY 143
Query: 451 DPSIGIYGLDFYVV 492
D I G + +V
Sbjct: 144 DKIDKIKGFNITIV 157
>UniRef50_P73308 Cluster: 50S ribosomal protein L5; n=227; cellular
organisms|Rep: 50S ribosomal protein L5 - Synechocystis
sp. (strain PCC 6803)
Length = 180
Score = 51.6 bits (118), Expect = 1e-05
Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 10/135 (7%)
Frame = +1
Query: 118 KNVMRNLHIRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 288
KN+ + + K+ +N +GE+ L + L +TGQ+PV ++AR + F IR
Sbjct: 24 KNIHQVPKLTKVTVNRGLGEASQNAKALESSLTELATITGQKPVVTRARKAIAGFKIREG 83
Query: 289 EKIAVHCTVRGAKAXXILXRGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIK 447
+ V T+R + L R + ++R++ + ++F GN+ GI+E + I
Sbjct: 84 MPVGVMVTLRSERMYAFLDRLINLALPRIRDFRGISPNSFDGRGNYSLGIREQLIFPEID 143
Query: 448 YDPSIGIYGLDFYVV 492
YD I G+D ++
Sbjct: 144 YDTIDQIRGMDVSII 158
>UniRef50_Q9G893 Cluster: Ribosomal protein L5; n=1; Malawimonas
jakobiformis|Rep: Ribosomal protein L5 - Malawimonas
jakobiformis
Length = 174
Score = 51.2 bits (117), Expect = 2e-05
Identities = 37/134 (27%), Positives = 69/134 (51%), Gaps = 9/134 (6%)
Frame = +1
Query: 118 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 297
KN+M I+K+ +NI V +S +R+ VLE +TGQ+ KA+ ++ SF +R++ I
Sbjct: 21 KNIMEIPSIKKISVNITV-DSKNRVIEPLMVLELITGQKAKVLKAKKSISSFNLRKDMYI 79
Query: 298 AVHCTVRGAKAXXILXRGL-----KVREYE-LRRDNFSATGNFGFGIQE---HIDLGIKY 450
A T++ + + + K+RE++ DN + N+ I+ ++ ++
Sbjct: 80 ACKVTLQKKNMYNFINKLINIVLPKIREFKGFSVDNIDSQNNYTLSIKNMSIFPEIEYQF 139
Query: 451 DPSIGIYGLDFYVV 492
D IYG+D +V
Sbjct: 140 DIFNKIYGMDITIV 153
>UniRef50_Q6B8W5 Cluster: Chloroplast 50S ribosomal protein L5; n=4;
Eukaryota|Rep: Chloroplast 50S ribosomal protein L5 -
Gracilaria tenuistipitata var. liui (Red alga)
Length = 179
Score = 51.2 bits (117), Expect = 2e-05
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 10/135 (7%)
Frame = +1
Query: 118 KNVMRNLHIRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 288
KN+ + + K+ +N +GE+ + L ++ + +TGQ+P +K++ + F IR N
Sbjct: 24 KNIHQIPKLVKITINRGLGEAANNKQVLEKSMNEIAAITGQKPKITKSKKAIAGFKIREN 83
Query: 289 EKIAVHCTVRGAKAXXILXRGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIK 447
I + T+R K L + + ++R++ + F GN+ G++E I IK
Sbjct: 84 IAIGLVVTLRRDKMYDFLNKLINLALPRIRDFRGISYKTFDGRGNYNLGLKEQIIFPEIK 143
Query: 448 YDPSIGIYGLDFYVV 492
YD I GLD +V
Sbjct: 144 YDNVDKIRGLDITIV 158
>UniRef50_Q1ACG2 Cluster: Chloroplast 50S ribosomal protein L5; n=5;
Eukaryota|Rep: Chloroplast 50S ribosomal protein L5 -
Chara vulgaris (Common stonewort)
Length = 189
Score = 50.8 bits (116), Expect = 3e-05
Identities = 35/134 (26%), Positives = 66/134 (49%), Gaps = 10/134 (7%)
Frame = +1
Query: 121 NVMRNLHIRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNE 291
N+ + +++K+ +N GE+ L K L + Q+P+ ++AR + F IR+
Sbjct: 25 NIHQLPYLKKIVINCGFGEASQNSKFLEGTIKDLSIIASQKPIVTRARKAIAGFQIRKKM 84
Query: 292 KIAVHCTVRGAKAXXILXRGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIKY 450
+ V T+RG L R + ++++++ L +F GNF FGI+E + I Y
Sbjct: 85 PVGVCVTLRGETMYAFLDRLIHLALPRIKDFQGLNWKSFDGYGNFHFGIREQLIFPEIHY 144
Query: 451 DPSIGIYGLDFYVV 492
D I G++ ++
Sbjct: 145 DKIDKIRGMNISII 158
>UniRef50_O04603 Cluster: 50S ribosomal protein L5, chloroplast
precursor; n=43; cellular organisms|Rep: 50S ribosomal
protein L5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 262
Score = 47.6 bits (108), Expect = 2e-04
Identities = 30/130 (23%), Positives = 68/130 (52%), Gaps = 10/130 (7%)
Frame = +1
Query: 121 NVMRNLHIRKLCLNICVGESGDR---LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNE 291
N+ + ++K+ +N +G++ L A K + +TGQ+P+ ++AR ++ +F IR ++
Sbjct: 79 NIHQVPKVQKIVVNCGIGDAAQNDKGLEAAMKDIALITGQKPIKTRARASIATFKIREDQ 138
Query: 292 KIAVHCTVRGAKAXXILXRGL-----KVREYE-LRRDNFSATGNFGFGIQEH-IDLGIKY 450
+ + T+RG L R + + R+++ + +F GN+ G+++ + I++
Sbjct: 139 PLGIAVTLRGDVMYSFLDRLINLALPRTRDFQGVSPSSFDGNGNYSIGVKDQGVFPEIRF 198
Query: 451 DPSIGIYGLD 480
D G+D
Sbjct: 199 DAVGKTRGMD 208
>UniRef50_Q30TV2 Cluster: 50S ribosomal protein L5; n=2;
Epsilonproteobacteria|Rep: 50S ribosomal protein L5 -
Thiomicrospira denitrificans (strain ATCC 33889 / DSM
1351)
Length = 181
Score = 46.4 bits (105), Expect = 6e-04
Identities = 32/135 (23%), Positives = 63/135 (46%), Gaps = 10/135 (7%)
Frame = +1
Query: 118 KNVMRNLHIRKLCLNICVG---ESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 288
KN M+ + K+ +++ G + + + + GQ+ A+ +V F +R
Sbjct: 22 KNPMQTPALEKIVISVGAGFAMKDNKLIQNIEDTITTIAGQKASTVIAKKSVAGFKVREG 81
Query: 289 EKIAVHCTVRGAKAXXILXRGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIK 447
+ V T+RG K R + +V+++ + R+ F GN+ FG+QE + +
Sbjct: 82 MPVGVRVTLRGEKMYNFFDRLVSMALPRVKDFRGVPRNGFDGRGNYNFGLQEQLIFPEVS 141
Query: 448 YDPSIGIYGLDFYVV 492
YD + I+G++ VV
Sbjct: 142 YDSVMQIHGMNITVV 156
>UniRef50_A5CCK0 Cluster: 50S ribosomal protein L5; n=1; Orientia
tsutsugamushi Boryong|Rep: 50S ribosomal protein L5 -
Orientia tsutsugamushi (strain Boryong) (Rickettsia
tsutsugamushi)
Length = 189
Score = 46.0 bits (104), Expect = 7e-04
Identities = 27/104 (25%), Positives = 56/104 (53%), Gaps = 9/104 (8%)
Frame = +1
Query: 142 IRKLCLNICVGES---GDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCT 312
I+K+ + +CVG++ + K + +TGQ+P KA+ ++ +F +R+ IA T
Sbjct: 36 IKKIVVTMCVGDAVVDSKIIYYVKKCMAMITGQEPGLIKAKKSIAAFKLRKGMPIACKVT 95
Query: 313 VRGAKAXXILXRGL-----KVREYE-LRRDNFSATGNFGFGIQE 426
+R +A + R + ++++++ +F GNF FGI++
Sbjct: 96 LRKKRAEDFIRRLVFEVFPRIKDFKGFSIKSFDREGNFSFGIKD 139
>UniRef50_Q2GEC7 Cluster: 50S ribosomal protein L5; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 50S ribosomal
protein L5 - Neorickettsia sennetsu (strain Miyayama)
Length = 177
Score = 45.2 bits (102), Expect = 0.001
Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 10/125 (8%)
Frame = +1
Query: 148 KLCLNICVG-ESGDR--LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVR 318
K+CL++ +G S D L A + L + GQ+ V + A+ ++ SF +R+ + T+R
Sbjct: 31 KVCLSVGLGGASSDSKLLASAVEDLSLIAGQKAVVTVAKKSISSFKLRKGFPVGCRVTLR 90
Query: 319 GAKAXXILXRGLKV-----REYE-LRRDNFSATGNFGFGIQEHIDL-GIKYDPSIGIYGL 477
+ + R L + ++++ NF GN FG+ EHI + +D + I G+
Sbjct: 91 KRRMFDFINRLLYMALPDQKDFKGFTMRNFDGHGNMAFGLTEHIVFPEVDFDKTYRIIGM 150
Query: 478 DFYVV 492
+ VV
Sbjct: 151 NVVVV 155
>UniRef50_A5KRR2 Cluster: 50S ribosomal protein L5; n=1; candidate
division TM7 genomosp. GTL1|Rep: 50S ribosomal protein
L5 - candidate division TM7 genomosp. GTL1
Length = 194
Score = 44.4 bits (100), Expect = 0.002
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +1
Query: 202 AKVLEQLTGQQPVFSKARYTVRSFGIRRN-EKIAVHCTVRGAKAXXILXRGLKVREYELR 378
+ L ++TGQQPV AR ++ SF IR +I V T+RGA+ L R + + +R
Sbjct: 64 SNTLRKITGQQPVDRMARKSIASFKIRSGMNRIGVSVTLRGARMYEFLDRLVNIALPRVR 123
Query: 379 RDNFSATGNFGFGIQEHIDLGIKYDPSI 462
+F G GF + LGI D SI
Sbjct: 124 --DFHGVGAKGFDHSGNYSLGIT-DQSI 148
>UniRef50_P49547 Cluster: Chloroplast 50S ribosomal protein L5; n=4;
Bacillariophyta|Rep: Chloroplast 50S ribosomal protein
L5 - Odontella sinensis (Marine centric diatom)
Length = 238
Score = 44.0 bits (99), Expect = 0.003
Identities = 22/87 (25%), Positives = 47/87 (54%), Gaps = 6/87 (6%)
Frame = +1
Query: 190 LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCTVRGAKAXXILXRGL----- 354
L ++ +TGQ+P+ ++A+ + F IR N ++ + T+RG+K L + +
Sbjct: 68 LKKSINEFTAITGQKPIITRAKKAIAGFKIRENMELGLTVTLRGSKMYSFLTKLIFFTFA 127
Query: 355 KVREYE-LRRDNFSATGNFGFGIQEHI 432
++R++ L +F GN+ G++E +
Sbjct: 128 QIRDFRGLSVRSFDKAGNYTLGLKEQL 154
>UniRef50_A3GUR6 Cluster: 50S ribosomal protein L5; n=1; Vibrio
cholerae NCTC 8457|Rep: 50S ribosomal protein L5 -
Vibrio cholerae NCTC 8457
Length = 112
Score = 43.6 bits (98), Expect = 0.004
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Frame = +1
Query: 121 NVMRNLHIRKLCLNICVGES-GDR--LTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNE 291
+VM+ I K+ LN+ VGE+ D+ L AA + ++GQ+P+ +KAR +V F IR
Sbjct: 24 SVMQVPRIEKITLNMGVGEAINDKKLLENAASDMAIISGQKPLITKARKSVAGFKIREGY 83
Query: 292 KIAVHCTVRGAK 327
I T+RG +
Sbjct: 84 PIGCKVTLRGER 95
>UniRef50_Q2EEW3 Cluster: Ribosomal protein L5; n=1; Helicosporidium
sp. ex Simulium jonesii|Rep: Ribosomal protein L5 -
Helicosporidium sp. subsp. Simulium jonesii (Green alga)
Length = 181
Score = 43.2 bits (97), Expect = 0.005
Identities = 36/160 (22%), Positives = 72/160 (45%), Gaps = 12/160 (7%)
Frame = +1
Query: 112 NSKNVMRNLHIRKLCLNICVG-----ESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFG 276
N K + I+K+ ++ +G E + + + K +TGQ+P ++A+ + +F
Sbjct: 22 NKKKALEVPVIKKIVISRGIGKANTLEINNYIEESIKEFLIMTGQKPKLNRAKKHIAAFK 81
Query: 277 IRRNEKIAVHCTVRGAKAXXILXRGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL 438
I++ + + T+RGAK L + + +R+++ + F + GN F I ++
Sbjct: 82 IKKKMILGLSVTLRGAKMYAFLYKFINIILPNIRQFQGIENKQFDSLGNITFPIYSQSNI 141
Query: 439 -GIKYDPSIGIYGLDFYVVLGRPGFNVXHRXRKTXKVGFP 555
+ Y+P + G F V + NV +GFP
Sbjct: 142 PELPYNPRVEKRG--FNVTINIKAKNVSEAKALCAYLGFP 179
>UniRef50_Q6KI43 Cluster: 50S ribosomal protein L5; n=12;
Bacteria|Rep: 50S ribosomal protein L5 - Mycoplasma
mobile
Length = 182
Score = 43.2 bits (97), Expect = 0.005
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Frame = +1
Query: 118 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLT---GQQPVFSKARYTVRSFGIRRN 288
K+ M+ I+K+ +N+ G +V+ +LT GQ P + A+ ++ SF IR
Sbjct: 23 KSPMQIPRIKKIVINMTAGNEVSNTKAVEEVINELTLITGQTPYKTHAKKSLASFKIREG 82
Query: 289 EKIAVHCTVRGAKAXXILXRGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIK 447
+ T+R K L + + ++R++ + +F GNF GI+E I I
Sbjct: 83 MPMGGKVTLRRDKMWDFLQKLIDIVIPRIRDFRGISPKSFDGRGNFALGIEEEIIFPEID 142
Query: 448 YDPSIGIYGLDFYVV 492
+D GLD +V
Sbjct: 143 FDKIRRNKGLDVIIV 157
>UniRef50_P56033 Cluster: 50S ribosomal protein L5; n=6;
Bacteria|Rep: 50S ribosomal protein L5 - Helicobacter
pylori (Campylobacter pylori)
Length = 181
Score = 43.2 bits (97), Expect = 0.005
Identities = 31/135 (22%), Positives = 63/135 (46%), Gaps = 10/135 (7%)
Frame = +1
Query: 118 KNVMRNLHIRKLCLNICVGESGDRLT---RAAKVLEQLTGQQPVFSKARYTVRSFGIRRN 288
KN M + K+ +++ G + A+ + + GQ+ V +KA+ +V F IR
Sbjct: 23 KNPMLLPKLEKIVISVGAGAHAKDMKIMQNIAQTISLIAGQKAVITKAKKSVAGFKIREG 82
Query: 289 EKIAVHCTVRGAKAXXILXRGL-----KVREYE-LRRDNFSATGNFGFGIQEHIDL-GIK 447
+ T+R + L + + +V+++ + R+ F GN+ FGI E + +
Sbjct: 83 MAVGAKVTLRNKRMYNFLEKLIVISLPRVKDFRGISRNGFDGCGNYTFGINEQLIFPEVV 142
Query: 448 YDPSIGIYGLDFYVV 492
YD + +G++ +V
Sbjct: 143 YDDIMVSHGMNITMV 157
>UniRef50_O21252 Cluster: Mitochondrial 60S ribosomal protein L5;
n=3; cellular organisms|Rep: Mitochondrial 60S ribosomal
protein L5 - Reclinomonas americana
Length = 182
Score = 42.3 bits (95), Expect = 0.009
Identities = 31/129 (24%), Positives = 67/129 (51%), Gaps = 12/129 (9%)
Frame = +1
Query: 142 IRKLCLNICVGESGD---RLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKIAVHCT 312
I K+ +N+ V E+ ++ +LE +TGQ+ + +KA+ ++ +F IR+ I V T
Sbjct: 31 IDKIIVNMGVKEAASDKKQILAPLLILELITGQKAIVTKAKKSISNFKIRKGFPIGVSVT 90
Query: 313 VRGAKAXXILXRGL-----KVREYE-LRRDNFSATGNFGFGIQEHI---DLGIKYDPSIG 465
+RG L + + K+R+++ + + + G+ GI++ + ++ +YD
Sbjct: 91 LRGNNMYEFLSKLITLVLPKIRDFKGVPFTSINKYGHLAIGIKDLLVFPEIESEYDKFNR 150
Query: 466 IYGLDFYVV 492
+YG + +V
Sbjct: 151 VYGANIVIV 159
>UniRef50_Q42196 Cluster: 60S ribosomal protein L11; n=1;
Arabidopsis thaliana|Rep: 60S ribosomal protein L11 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 64
Score = 41.1 bits (92), Expect = 0.021
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +1
Query: 550 FPHRLTKEDAXKWFQQKYDGII 615
F HR+TK+DA KWFQ KY+G+I
Sbjct: 27 FQHRVTKDDAMKWFQVKYEGVI 48
>UniRef50_A7CZB2 Cluster: Ribosomal protein L5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein L5 - Opitutaceae
bacterium TAV2
Length = 204
Score = 39.9 bits (89), Expect = 0.049
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 8/111 (7%)
Frame = +1
Query: 118 KNVMRNLHIRKLCLNICVGESGDRLTRAAKV---LEQLTGQQPVFSKARYTVRSFGIRRN 288
KN I K+ LN + D+ T+ A + L + GQ+PV +K+R V +F +R+
Sbjct: 33 KNKHEVPQIVKINLNTGIDAEADK-TQIADIQRDLGNIAGQKPVLTKSRKAVSNFKLRQG 91
Query: 289 EKIAVHCTVRGAKAXXILXRGLKV-----REYELRRDNFSATGNFGFGIQE 426
+ + + T+RG L R L V R++ GN+ GI +
Sbjct: 92 QIVGAYVTLRGNAMWEFLYRLLAVALPTIRDFRGVPAKLDGRGNYNLGISD 142
>UniRef50_A7P1Q7 Cluster: Chromosome chr19 scaffold_4, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr19 scaffold_4, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 188
Score = 37.9 bits (84), Expect = 0.20
Identities = 18/31 (58%), Positives = 22/31 (70%)
Frame = +1
Query: 283 RNEKIAVHCTVRGAKAXXILXRGLKVREYEL 375
R KIA + TV+G KA +L GLKV+EYEL
Sbjct: 114 RYTKIACYVTVKGEKAMRLLESGLKVKEYEL 144
>UniRef50_P46749 Cluster: Mitochondrial 60S ribosomal protein L5;
n=1; Prototheca wickerhamii|Rep: Mitochondrial 60S
ribosomal protein L5 - Prototheca wickerhamii
Length = 231
Score = 37.5 bits (83), Expect = 0.26
Identities = 23/100 (23%), Positives = 52/100 (52%), Gaps = 6/100 (6%)
Frame = +1
Query: 118 KNVMRNLHIRKLCLNIC----VGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRR 285
KN+M + + K+ N GE + + A LE +TGQ+P ++ A+ ++ +F +R+
Sbjct: 60 KNIMECVSLNKIVCNTSSKHYAGEK-ESILPAFTALEMITGQKPKYTCAKKSISTFKLRQ 118
Query: 286 NEKIAVHCTVRGAKAXXILXRGLKVREYELR--RDNFSAT 399
N+ + ++RG L + + + ++ +N+S++
Sbjct: 119 NQILGCKNSLRGNTMYRFLEKYISIVSTRIKDWSENYSSS 158
>UniRef50_Q9G4D4 Cluster: Ribosomal protein L5; n=1;
Thraustochytrium aureum|Rep: Ribosomal protein L5 -
Thraustochytrium aureum
Length = 190
Score = 33.9 bits (74), Expect = 3.2
Identities = 19/77 (24%), Positives = 37/77 (48%)
Frame = +1
Query: 118 KNVMRNLHIRKLCLNICVGESGDRLTRAAKVLEQLTGQQPVFSKARYTVRSFGIRRNEKI 297
K V ++ R LN S L ++E +TGQ+P S ++ +F IR+ + +
Sbjct: 32 KEVFIHISFRSSFLN---ASSNVVLVSCIFIIELITGQKPKISFSKKDNSNFNIRKGDLV 88
Query: 298 AVHCTVRGAKAXXILXR 348
++ T+RG + + +
Sbjct: 89 GIYVTLRGPRIFSFIEK 105
>UniRef50_Q61E12 Cluster: Putative uncharacterized protein CBG12266;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG12266 - Caenorhabditis
briggsae
Length = 418
Score = 33.9 bits (74), Expect = 3.2
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +2
Query: 473 DWTFTSYLAGQVSTXHTEXVRXEKWDFPTASQRKML 580
DWTFT++ G V+ E + EKWDF S +K L
Sbjct: 383 DWTFTTHYKGTVNGLKVE--KREKWDFRKNSAKKSL 416
>UniRef50_Q1MDG2 Cluster: Conserved hypothetical exported protein
precursor; n=2; Rhizobium|Rep: Conserved hypothetical
exported protein precursor - Rhizobium leguminosarum bv.
viciae (strain 3841)
Length = 560
Score = 32.7 bits (71), Expect = 7.4
Identities = 14/55 (25%), Positives = 30/55 (54%)
Frame = -1
Query: 326 LAPRTVQWTAIFSLRRIPKDRTVYLALENTGCCPVSCSNTLAARVSLSPDSPTQM 162
++P VQ A + ++PK + + L + G C C+ ++A ++PD+P ++
Sbjct: 313 VSPAPVQDAAAETSEKLPKTQPMDFLLMSNGNCREECTQWISADGDITPDTPARL 367
>UniRef50_Q9MAT2 Cluster: F13M7.17; n=1; Arabidopsis thaliana|Rep:
F13M7.17 - Arabidopsis thaliana (Mouse-ear cress)
Length = 665
Score = 32.3 bits (70), Expect = 9.8
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Frame = +1
Query: 337 ILXRGLKVREYELRR--DNFSATGNFGFGIQEH---IDLGIKYDPSIGIYGLDFYVVLG 498
+L +GLK EY + S +G G GI+ H +D GIK D +IG +D Y G
Sbjct: 284 MLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCG 342
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 584,532,725
Number of Sequences: 1657284
Number of extensions: 11105271
Number of successful extensions: 27059
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 26323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27031
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46051731393
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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