Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_G01
(596 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67; Eukaryo... 275 4e-73
UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107; Fungi/... 261 8e-69
UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57; Eukaryo... 225 8e-58
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr... 192 7e-48
UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4... 185 6e-46
UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|R... 177 1e-43
UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative; ... 173 3e-42
UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, wh... 169 6e-41
UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas ... 154 2e-36
UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;... 153 2e-36
UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1; Encephal... 133 3e-30
UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1; ... 99 7e-20
UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951, ... 98 1e-19
UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillard... 91 2e-17
UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;... 75 2e-12
UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31; Archa... 66 4e-10
UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1; Methan... 65 1e-09
UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12; Archa... 56 5e-07
UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus... 56 6e-07
UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8; Euryar... 56 6e-07
UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2; Methan... 51 2e-05
UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole gen... 46 9e-04
UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2; environm... 40 0.034
UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3; Thermo... 40 0.059
UniRef50_UPI00006CDDBC Cluster: hypothetical protein TTHERM_0029... 34 2.2
UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2; Thermo... 34 2.9
UniRef50_Q9K4U6 Cluster: 15,16-dihydrobiliverdin:ferredoxin oxid... 34 2.9
UniRef50_Q4P153 Cluster: Putative uncharacterized protein; n=1; ... 33 6.7
UniRef50_Q0UX35 Cluster: Putative uncharacterized protein; n=1; ... 33 6.7
UniRef50_Q478C5 Cluster: Regulatory protein, LysR:LysR, substrat... 32 8.9
>UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67;
Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila
melanogaster (Fruit fly)
Length = 299
Score = 275 bits (675), Expect = 4e-73
Identities = 127/178 (71%), Positives = 140/178 (78%)
Frame = +2
Query: 62 MGFVKVVXNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 241
MGFVKVV NKQYFKRYQVKF+RRREGKTDYYARKRL QDKNKYNTPKYRLIVRLSNKD+
Sbjct: 1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDI 60
Query: 242 TCQVAYSRIEXDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 421
T Q+AY+RIE D +VCAAYSHELP+YG++VGLTNYAAAY TG
Sbjct: 61 TVQIAYARIEGDRVVCAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYA 120
Query: 422 XXXXXXXXEYNVEPVDNGPXAFTCYLDVXLXRTTTGARVFGAMXGAVDGGLNVPHSIK 595
E+NVEPVD+GP AF C+LDV L RTTTGARVFGAM GAVDGGLN+PHS+K
Sbjct: 121 GCTEVTGEEFNVEPVDDGPGAFRCFLDVGLARTTTGARVFGAMKGAVDGGLNIPHSVK 178
>UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107;
Fungi/Metazoa group|Rep: 60S ribosomal protein L5 - Homo
sapiens (Human)
Length = 297
Score = 261 bits (640), Expect = 8e-69
Identities = 120/178 (67%), Positives = 136/178 (76%)
Frame = +2
Query: 62 MGFVKVVXNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 241
MGFVKVV NK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 242 TCQVAYSRIEXDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 421
CQ+AY+RIE D IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 422 XXXXXXXXEYNVEPVDNGPXAFTCYLDVXLXRTTTGARVFGAMXGAVDGGLNVPHSIK 595
EYNVE +D P AFTCYLD L RTTTG +VFGA+ GAVDGGL++PHS K
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTK 178
>UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57;
Eukaryota|Rep: 60S ribosomal protein L5 - Caenorhabditis
elegans
Length = 293
Score = 225 bits (549), Expect = 8e-58
Identities = 106/176 (60%), Positives = 123/176 (69%)
Frame = +2
Query: 62 MGFVKVVXNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 241
MG VKV+ NK YFKRYQVK +RRREGKTDYYARKRL VQDKNKYNTPKYRLIVR++NKDV
Sbjct: 1 MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDV 60
Query: 242 TCQVAYSRIEXDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 421
Q+AYS+IE D +V +AYSHELPRYG+KVGLTNYAAAY+TG
Sbjct: 61 VAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYK 120
Query: 422 XXXXXXXXEYNVEPVDNGPXAFTCYLDVXLXRTTTGARVFGAMXGAVDGGLNVPHS 589
+YNVE + F LD+ L RTTTG+++F M G DGG+NVPHS
Sbjct: 121 GHEELTGEDYNVEE-EGDRAPFKAVLDIGLARTTTGSKIFAVMKGVADGGINVPHS 175
>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
alga; n=1; Ostreococcus tauri|Rep: T08009 probable
ribosomal protein L5-green alga - Ostreococcus tauri
Length = 331
Score = 192 bits (467), Expect = 7e-48
Identities = 91/175 (52%), Positives = 111/175 (63%), Gaps = 2/175 (1%)
Frame = +2
Query: 77 VVXNKQYFKRYQVKFKRRREG--KTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQ 250
V Y RYQVKF RRR G KTDY AR+RL+ QDKNKYN+PKYR +VR +N+DV CQ
Sbjct: 13 VAKTTAYQSRYQVKFARRRLGACKTDYQARQRLITQDKNKYNSPKYRFVVRFTNRDVVCQ 72
Query: 251 VAYSRIEXDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXX 430
V Y+ + D +CAAYSHELP+YG+K GLTNYAA Y+TG
Sbjct: 73 VVYATLSGDVTICAAYSHELPKYGMKAGLTNYAATYATGLLCARRLLTKYGLADAYEGKT 132
Query: 431 XXXXXEYNVEPVDNGPXAFTCYLDVXLXRTTTGARVFGAMXGAVDGGLNVPHSIK 595
+Y+VE D F C+LD L RT+TGARVF A+ GAVDGGL++PH+ K
Sbjct: 133 EDLGEDYHVEQGDEEARPFKCFLDTGLVRTSTGARVFAALKGAVDGGLDIPHNEK 187
>UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4;
Leishmania|Rep: 60S ribosomal protein L5, putative -
Leishmania major strain Friedlin
Length = 328
Score = 185 bits (451), Expect = 6e-46
Identities = 90/181 (49%), Positives = 117/181 (64%), Gaps = 6/181 (3%)
Frame = +2
Query: 62 MGFVKVVXNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 241
M FVKVV NK YFKR+QVK++RRREGKTDY+AR+++V+QDK K+ +PKYRL+VR++NKD+
Sbjct: 24 MPFVKVVKNKAYFKRFQVKYRRRREGKTDYHARRQMVLQDKTKFGSPKYRLVVRITNKDI 83
Query: 242 TCQVAYSRIEXDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG------XXXXXXXXXXXX 403
Q+ ++I D +V AAY+HELP +G++ GLTNYAAAY+TG
Sbjct: 84 IAQIVQAKIVGDEVVMAAYAHELPAFGIEHGLTNYAAAYATGLLLARRTLAKLGIADKFQ 143
Query: 404 XXXXXXXXXXXXXXEYNVEPVDNGPXAFTCYLDVXLXRTTTGARVFGAMXGAVDGGLNVP 583
+ + E D F LDV L RTTTGARVFG + GAVDGG+ VP
Sbjct: 144 GAKEADGSYSAVRTKKDDEGDDEERFPFKAILDVGLARTTTGARVFGVLKGAVDGGMAVP 203
Query: 584 H 586
H
Sbjct: 204 H 204
>UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|Rep:
Ribosomal protein L5e - Hister sp. APV-2005
Length = 268
Score = 177 bits (432), Expect = 1e-43
Identities = 79/89 (88%), Positives = 85/89 (95%)
Frame = +2
Query: 62 MGFVKVVXNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 241
MGFVKVV NKQYFKR+QVKFKRRREGKTDYYARKRL+VQDKNKYNTPKYRLIVR SN+D+
Sbjct: 1 MGFVKVVKNKQYFKRFQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNRDI 60
Query: 242 TCQVAYSRIEXDHIVCAAYSHELPRYGVK 328
TCQ+AYSRIE D I+CAAYSHELPRYGVK
Sbjct: 61 TCQIAYSRIEGDKILCAAYSHELPRYGVK 89
>UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative;
n=4; Plasmodium (Vinckeia)|Rep: Ribosomal protein family
L5, putative - Plasmodium berghei
Length = 314
Score = 173 bits (421), Expect = 3e-42
Identities = 89/178 (50%), Positives = 106/178 (59%), Gaps = 3/178 (1%)
Frame = +2
Query: 62 MGFVKVVXNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 241
M +VKVV NK YFKRYQVK++RRREGKTDY ARK L++QDKNKYN K R IVR +N +
Sbjct: 1 MAYVKVVKNKAYFKRYQVKYRRRREGKTDYRARKALILQDKNKYNAQKLRFIVRKTNNQI 60
Query: 242 TCQVAYSRIEXDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG---XXXXXXXXXXXXXXX 412
CQ+A S IE D I+ A S EL RYG+ VGL NYAAAY+TG
Sbjct: 61 ICQIASSHIEGDKILSEAKSKELIRYGIPVGLKNYAAAYATGLLCARRFLKSLNLDNQFI 120
Query: 413 XXXXXXXXXXXEYNVEPVDNGPXAFTCYLDVXLXRTTTGARVFGAMXGAVDGGLNVPH 586
E + + +LDV + RTTTG RVF A+ GA DGGLN+PH
Sbjct: 121 GVEKVTSESVAEDGDKEEEGDRKPIKAFLDVGITRTTTGNRVFAALKGACDGGLNIPH 178
>UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 338
Score = 169 bits (410), Expect = 6e-41
Identities = 84/176 (47%), Positives = 110/176 (62%)
Frame = +2
Query: 62 MGFVKVVXNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 241
M FVK+V YFKR+Q KF+RRREGKTDYYAR RL+VQDK+KYN+PKYR +VR +N +
Sbjct: 1 MAFVKLVKGTPYFKRFQTKFRRRREGKTDYYARSRLIVQDKDKYNSPKYRFVVRHTNTKI 60
Query: 242 TCQVAYSRIEXDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 421
CQV Y+ ++ D +V AA S EL R+G+ GLTNYAAAY+TG
Sbjct: 61 ICQVIYATLKGDKVVAAAESTELKRFGLTSGLTNYAAAYATGLLLARRTLKTLKMDKFYE 120
Query: 422 XXXXXXXXEYNVEPVDNGPXAFTCYLDVXLXRTTTGARVFGAMXGAVDGGLNVPHS 589
+ N++ P F LD+ L R+T G RVF A+ GA DGG+++PH+
Sbjct: 121 GNKTI---DGNLKTQRERP--FFAVLDIGLVRSTLGNRVFAALKGAADGGIHIPHN 171
>UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L5 - Trichomonas
vaginalis
Length = 308
Score = 154 bits (373), Expect = 2e-36
Identities = 78/173 (45%), Positives = 100/173 (57%)
Frame = +2
Query: 74 KVVXNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQV 253
K+V N YF R+Q KF+RRRE KTDY R +L+ QDK KY KYRL+ R++N V Q+
Sbjct: 4 KLVKNAGYFSRFQTKFRRRREAKTDYVQRTQLIQQDKTKYGAAKYRLVARITNTKVIAQI 63
Query: 254 AYSRIEXDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXX 433
+ + D VC A S ELP+YG+K+GL+NY AAY+TG
Sbjct: 64 VVAELTGDKTVCQALSTELPKYGIKLGLSNYPAAYATG---LLVARRFLTQMKLADVFKT 120
Query: 434 XXXXEYNVEPVDNGPXAFTCYLDVXLXRTTTGARVFGAMXGAVDGGLNVPHSI 592
EY + + P F LDV L RTTTGA+VF M GAVDGGL +PH++
Sbjct: 121 EITEEYLNDEENRRP--FKVILDVGLARTTTGAKVFAVMKGAVDGGLFIPHNV 171
>UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L18p/L5e
family protein - Tetrahymena thermophila SB210
Length = 590
Score = 153 bits (372), Expect = 2e-36
Identities = 70/159 (44%), Positives = 95/159 (59%)
Frame = +2
Query: 113 VKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEXDHIVCA 292
++ K+ +G TDYYARKRL++QDK+KYNTPKYRL+ R +N + Q+ Y+ ++ D ++CA
Sbjct: 307 IQIKQNYQGLTDYYARKRLIIQDKDKYNTPKYRLVARATNTRIIAQIVYATLKCDRVLCA 366
Query: 293 AYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDN 472
A S+EL R+GV GL +YAAAY+TG +NV+
Sbjct: 367 ADSYELKRFGVSTGLASYAAAYATGLLLARRLLKQIGLDTVYAGQTKVDGAYFNVDEDQK 426
Query: 473 GPXAFTCYLDVXLXRTTTGARVFGAMXGAVDGGLNVPHS 589
F LD L RTTTG RVFG + GA DGG+N+PHS
Sbjct: 427 EKKPFKAILDAGLVRTTTGNRVFGVLKGACDGGINIPHS 465
Score = 42.7 bits (96), Expect = 0.006
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +2
Query: 62 MGFVKVVXNKQYFKRYQVKFKRRREGKTDYY 154
+GFVKV+ K YFKR+Q K++RRR GK YY
Sbjct: 13 LGFVKVLKTKAYFKRFQTKYRRRR-GKQLYY 42
>UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L5 -
Encephalitozoon cuniculi
Length = 283
Score = 133 bits (321), Expect = 3e-30
Identities = 69/168 (41%), Positives = 95/168 (56%), Gaps = 1/168 (0%)
Frame = +2
Query: 89 KQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRI 268
+ Y K +QVK +RRREGKTDY R ++ QD N + K+RL+VR++ V CQ+ + +
Sbjct: 4 RNYHKNFQVKRRRRREGKTDYKHRTNMIRQDSNSCGSVKHRLVVRITGSRVICQIVAAYM 63
Query: 269 EXDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXE 448
+ D ++ A S EL RYG+ G TNY+AAY+TG
Sbjct: 64 DGDRVMVYADSRELERYGINFGATNYSAAYATGFLIGRRALTAMSLDEVYRPKEIDGT-- 121
Query: 449 YNV-EPVDNGPXAFTCYLDVXLXRTTTGARVFGAMXGAVDGGLNVPHS 589
Y+V + +D A +LD+ L R+T GARVFGA+ GA D GLNVPHS
Sbjct: 122 YSVTKDIDGEKKAPRVFLDIGLARSTRGARVFGALKGASDAGLNVPHS 169
>UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1;
Theileria sp. CAAS-2005|Rep: Putative uncharacterized
protein - Theileria sp. CAAS-2005
Length = 255
Score = 99.1 bits (236), Expect = 7e-20
Identities = 55/124 (44%), Positives = 65/124 (52%)
Frame = +2
Query: 224 LSNKDVTCQVAYSRIEXDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXX 403
++NK V CQV S + D + +A S EL YGVKVGLTNYAAAY TG
Sbjct: 4 VTNKRVICQVVSSTLVGDKVHASADSAELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLK 63
Query: 404 XXXXXXXXXXXXXXEYNVEPVDNGPXAFTCYLDVXLXRTTTGARVFGAMXGAVDGGLNVP 583
Y+VE +N F LDV + TTG RVFGA+ GA DGGL+VP
Sbjct: 64 LDSQFVGKLEVDGEVYHVEEEENERRPFKALLDVGVKNVTTGNRVFGALKGACDGGLHVP 123
Query: 584 HSIK 595
HS K
Sbjct: 124 HSEK 127
>UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_2951, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 117
Score = 98.3 bits (234), Expect = 1e-19
Identities = 44/72 (61%), Positives = 53/72 (73%)
Frame = +2
Query: 62 MGFVKVVXNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 241
+ FVK + Y KR+QVKFKRRR GKTDY AR RL+ QDKNKYNTPKYR +VR +NKD+
Sbjct: 12 LAFVKAQKTRAYSKRFQVKFKRRRAGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 71
Query: 242 TCQVAYSRIEXD 277
T Q+ + I D
Sbjct: 72 TAQIISASIAGD 83
>UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillardia
theta|Rep: 60S ribosomal protein L5 - Guillardia theta
(Cryptomonas phi)
Length = 232
Score = 91.1 bits (216), Expect = 2e-17
Identities = 52/168 (30%), Positives = 82/168 (48%)
Frame = +2
Query: 86 NKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSR 265
N Y R+++K +RRR GKTDY R +L+ QDK K+ K R+I+R S ++++ Q+ S
Sbjct: 9 NASYHSRFKLKKRRRRIGKTDYKKRMKLIRQDKKKFENKKKRIIIRFSKRNLSLQMVNSN 68
Query: 266 IEXDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXX 445
++ D I+ ++Y L + K NY +Y G
Sbjct: 69 VDGDFILLSSYLKNLSKLEYKNLTNNYPFSYLLGYYFGKDLIEKVKQSET---------- 118
Query: 446 EYNVEPVDNGPXAFTCYLDVXLXRTTTGARVFGAMXGAVDGGLNVPHS 589
YN + N T +D+ L R T G + F +M G+VD G+N+PH+
Sbjct: 119 -YNKK---NYSSKITAIIDIGLKRATIGNKSFASMKGSVDSGINIPHN 162
>UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 74.5 bits (175), Expect = 2e-12
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = +2
Query: 212 LIVRLSNKDVTCQVAYSRIEXDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 367
+IV +N+ + CQ+AY+ E D IVCAAY+HELP+ GVKVGLTNYAAAY G
Sbjct: 1 MIVLATNRGIICQIAYAGNECDMIVCAAYAHELPKSGVKVGLTNYAAAYCIG 52
Score = 41.1 bits (92), Expect = 0.019
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +2
Query: 509 LXRTTTGARVFGAMXGAVDGGLNVPHSIK 595
L RTTTG +VFGA+ VD GL++PHS K
Sbjct: 72 LARTTTGNKVFGALKEPVDCGLSIPHSTK 100
>UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31;
Archaea|Rep: 50S ribosomal protein L18P - Aeropyrum
pernix
Length = 214
Score = 66.5 bits (155), Expect = 4e-10
Identities = 40/89 (44%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Frame = +2
Query: 104 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEXDHI 283
RY+V +RRREGKT+YY R RLV + K R+ VR+SN+ + Q +RIE D +
Sbjct: 6 RYRVPLRRRREGKTNYYRRFRLV-------KSGKPRMAVRISNEYLWVQFLEARIEGDRV 58
Query: 284 VCAAYSHEL-PRYGVKVGLTNYAAAYSTG 367
+ AA+S EL ++G K N AAY TG
Sbjct: 59 IAAAHSRELIKKFGWKGDGNNTCAAYLTG 87
Score = 39.9 bits (89), Expect = 0.044
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +2
Query: 497 LDVXLXRTTTGARVFGAMXGAVDGGLNVPHS 589
LDV L + G+RVF A+ GA+D G+ +PHS
Sbjct: 104 LDVGLHKPVKGSRVFAALKGALDAGVEIPHS 134
>UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1;
Methanoculleus marisnigri JR1|Rep: Ribosomal protein
L18P/L5E - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 175
Score = 65.3 bits (152), Expect = 1e-09
Identities = 37/88 (42%), Positives = 49/88 (55%)
Frame = +2
Query: 104 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEXDHI 283
RY V F+RR EGKTDYY R L+ TP R++VR +N+ + Q+ +E D
Sbjct: 6 RYFVPFRRRHEGKTDYYKRMSLLSS-----GTP--RMVVRKTNRQIIVQLVVPEVEGDST 58
Query: 284 VCAAYSHELPRYGVKVGLTNYAAAYSTG 367
+ AAYS EL YG + + AAY TG
Sbjct: 59 LVAAYSAELAGYGYEGSTASTPAAYLTG 86
Score = 41.5 bits (93), Expect = 0.015
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +2
Query: 497 LDVXLXRTTTGARVFGAMXGAVDGGLNVPH 586
LD+ L R GARVF A+ GAVD GL+VP+
Sbjct: 103 LDIGLARAKPGARVFAALKGAVDAGLDVPY 132
>UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12;
Archaea|Rep: 50S ribosomal protein L18P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 174
Score = 56.4 bits (130), Expect = 5e-07
Identities = 33/88 (37%), Positives = 50/88 (56%)
Frame = +2
Query: 104 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEXDHI 283
RY+V F+RRREG+T+Y+ R +L++ ++ R++VR S ++V Q+ E D
Sbjct: 6 RYKVPFRRRREGRTNYHLRLKLLLSGQD-------RVVVRKSARNVQIQLLAPTPEGDIT 58
Query: 284 VCAAYSHELPRYGVKVGLTNYAAAYSTG 367
+A S EL +YG N AAY TG
Sbjct: 59 YSSAVSSELAKYGYTGATGNTTAAYLTG 86
Score = 33.1 bits (72), Expect = 5.1
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 497 LDVXLXRTTTGARVFGAMXGAVDGGLNVPHS 589
LD+ L ++ G+RV+ A+ G VD G +P S
Sbjct: 103 LDIGLQASSAGSRVYAALKGIVDSGFEIPCS 133
>UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus
musculus|Rep: PREDICTED: cadherin 18 - Mus musculus
Length = 339
Score = 56.0 bits (129), Expect = 6e-07
Identities = 22/32 (68%), Positives = 30/32 (93%)
Frame = +2
Query: 110 QVKFKRRREGKTDYYARKRLVVQDKNKYNTPK 205
+++F+R +EGKTDYYARKRL +QDKN+YNTP+
Sbjct: 36 KLRFRRWQEGKTDYYARKRLEIQDKNEYNTPE 67
>UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L18P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 187
Score = 56.0 bits (129), Expect = 6e-07
Identities = 33/88 (37%), Positives = 47/88 (53%)
Frame = +2
Query: 104 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEXDHI 283
RY+V +RRRE +TDY+ R RL+ + K RL+ R SNK V Q+ D
Sbjct: 6 RYKVPMRRRREARTDYHQRLRLL-------KSGKPRLVARKSNKHVRAQLVTLGPNGDDT 58
Query: 284 VCAAYSHELPRYGVKVGLTNYAAAYSTG 367
+ +A+S +L YG + N +AY TG
Sbjct: 59 LASAHSSDLAEYGWEAPTGNMPSAYLTG 86
Score = 37.5 bits (83), Expect = 0.24
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +2
Query: 497 LDVXLXRTTTGARVFGAMXGAVDGGLNVPHS 589
LD+ L T G++VF GA+D GL++PH+
Sbjct: 103 LDIGLNSPTPGSKVFAIQEGAIDAGLDIPHN 133
>UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L18P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 193
Score = 50.8 bits (116), Expect = 2e-05
Identities = 32/87 (36%), Positives = 46/87 (52%)
Frame = +2
Query: 107 YQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEXDHIV 286
Y+V+FKRRREGKT+Y R +LV DK R++VR+++ Q+ D +
Sbjct: 7 YKVQFKRRREGKTNYNKRYKLVDLDKT-------RMVVRITSNHTITQLVKIGENGDETL 59
Query: 287 CAAYSHELPRYGVKVGLTNYAAAYSTG 367
+A S L +G N +AAY TG
Sbjct: 60 VSATSKNLKEFGWLGNGKNTSAAYLTG 86
>UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 45.6 bits (103), Expect = 9e-04
Identities = 21/48 (43%), Positives = 31/48 (64%)
Frame = +2
Query: 446 EYNVEPVDNGPXAFTCYLDVXLXRTTTGARVFGAMXGAVDGGLNVPHS 589
+Y+VE NG F +L+V L +T+ G VFG + A+DG LN+PH+
Sbjct: 43 DYSVEST-NGKRPFYAFLNVGLVKTSIGNCVFGVLKEALDGSLNIPHN 89
>UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2;
environmental samples|Rep: Ribosomal protein L18/L5 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 171
Score = 40.3 bits (90), Expect = 0.034
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Frame = +2
Query: 101 KRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEXDH 280
K +++FKRRR G+TDY R R++ R +VR+SN TCQ+ D
Sbjct: 5 KNQRLRFKRRRTGETDYRRRMRML-------RGGATRAVVRVSNTQTTCQLINYDSTGDE 57
Query: 281 IVCAAYSHEL-PRYG--VKVGLTNYAAAYSTG 367
++ + L R+G + + A+Y TG
Sbjct: 58 VIISVTGKTLVDRFGWPLDASRKSVPASYLTG 89
Score = 40.3 bits (90), Expect = 0.034
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +2
Query: 497 LDVXLXRTTTGARVFGAMXGAVDGGLNVPH 586
LDV L T+G RVF A+ G VD GL++PH
Sbjct: 106 LDVGLAAATSGNRVFAALRGMVDAGLDIPH 135
>UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3;
Thermoplasma|Rep: 50S ribosomal protein L18P -
Thermoplasma acidophilum
Length = 163
Score = 39.5 bits (88), Expect = 0.059
Identities = 31/84 (36%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = +2
Query: 119 FKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVA-YSRIEXDHIVCAA 295
FKR+ G TDY R +L+ + + K R IVR++ K V QVA YS I D I+
Sbjct: 6 FKRKEAGITDYSKRLKLL-KSREK------RFIVRITGKGVIAQVAEYSDI-GDRILFTV 57
Query: 296 YSHELPRYGVKVGLTNYAAAYSTG 367
L +YGV + N Y G
Sbjct: 58 TDKTLAKYGVDLRGNNIQVCYLVG 81
>UniRef50_UPI00006CDDBC Cluster: hypothetical protein TTHERM_00295350;
n=1; Tetrahymena thermophila SB210|Rep: hypothetical
protein TTHERM_00295350 - Tetrahymena thermophila SB210
Length = 1346
Score = 34.3 bits (75), Expect = 2.2
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Frame = -2
Query: 226 ETHNQTIFRCVIFVLVLNNEAFTSIIISFPFTTPLE---FYLVPLEV---LFVXHNFNES 65
+T+ I++ VI ++ N+E I PF+ PLE FY P+ V L + ++N
Sbjct: 1118 QTNMTQIYKEVIKTIIANSEFDKKSITFEPFSFPLEYVYFYPTPIGVAIKLKLSASWNAG 1177
Query: 64 HILNLSYKVASTD 26
LNLS+K A+ D
Sbjct: 1178 FNLNLSFKNATLD 1190
>UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2;
Thermoplasmatales|Rep: 50S ribosomal protein L18P -
Picrophilus torridus
Length = 158
Score = 33.9 bits (74), Expect = 2.9
Identities = 21/65 (32%), Positives = 32/65 (49%)
Frame = +2
Query: 122 KRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEXDHIVCAAYS 301
KRRREG TDY R RLV+ + R ++R + K + Q+ E DH++ +
Sbjct: 8 KRRREGVTDYRKRYRLVISRET-------RAVIRQTRKGLIIQLVDYVPEGDHVLVTVTN 60
Query: 302 HELPR 316
L +
Sbjct: 61 KTLKK 65
>UniRef50_Q9K4U6 Cluster: 15,16-dihydrobiliverdin:ferredoxin
oxidoreductase; n=1; Prochlorococcus marinus|Rep:
15,16-dihydrobiliverdin:ferredoxin oxidoreductase -
Prochlorococcus marinus
Length = 241
Score = 33.9 bits (74), Expect = 2.9
Identities = 18/65 (27%), Positives = 34/65 (52%)
Frame = +2
Query: 62 MGFVKVVXNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 241
+ F +V ++YF RY + + D+ ++K + + D NKY +P + L+ S D+
Sbjct: 102 LDFQPLVQEERYFCRYYKDLQILKNRFVDFNSQKTMKIYDSNKYFSP-WVLLYNGSFDDL 160
Query: 242 TCQVA 256
C +A
Sbjct: 161 QCSLA 165
>UniRef50_Q4P153 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 534
Score = 32.7 bits (71), Expect = 6.7
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = -1
Query: 398 VFEAVFVLIADQLNMLQHNLSDQPSHHNVATHVNKQRTQYGHXQSESRPPGMLHLCWRDA 219
+F A+ DQ +L H++++ H+ A+H Q Q H Q + P + H A
Sbjct: 120 IFSAMNAAQFDQYGLLSHSVANASHQHHAASH-QHQHHQQPHHQHAAFNPALGHA----A 174
Query: 218 QSDDI 204
Q DDI
Sbjct: 175 QGDDI 179
>UniRef50_Q0UX35 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 503
Score = 32.7 bits (71), Expect = 6.7
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -1
Query: 362 LNMLQHNLSDQPSHHNVATHVNKQRTQYGHXQSESRPP 249
LN LQ +L D PSH T V + Q H Q + PP
Sbjct: 21 LNRLQPSLEDPPSHLQALTKVVMMQHQIPHQQQHALPP 58
>UniRef50_Q478C5 Cluster: Regulatory protein, LysR:LysR,
substrate-binding; n=1; Dechloromonas aromatica RCB|Rep:
Regulatory protein, LysR:LysR, substrate-binding -
Dechloromonas aromatica (strain RCB)
Length = 327
Score = 32.3 bits (70), Expect = 8.9
Identities = 18/80 (22%), Positives = 40/80 (50%)
Frame = +2
Query: 110 QVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEXDHIVC 289
++K + R+G YY+ + V+ + +Y+ P RL+ +++ + A E H+
Sbjct: 4 RIKSRASRQGNW-YYSNQAFVLDETMRYDLPDLRLVAAIADSGSLTRAA----EQVHLAP 58
Query: 290 AAYSHELPRYGVKVGLTNYA 349
++ SH L + +G+ +A
Sbjct: 59 SSASHRLTQLEAALGIPLFA 78
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 539,223,024
Number of Sequences: 1657284
Number of extensions: 9829121
Number of successful extensions: 23383
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22789
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23355
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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