Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_G01
(596 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 261 1e-69
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 261 1e-69
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 261 1e-69
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 261 1e-69
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 261 1e-69
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 261 1e-69
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 259 5e-69
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 186 4e-47
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 157 2e-38
U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein prot... 46 8e-05
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 261 bits (640), Expect = 1e-69
Identities = 120/178 (67%), Positives = 136/178 (76%)
Frame = +2
Query: 62 MGFVKVVXNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 241
MGFVKVV NK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 242 TCQVAYSRIEXDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 421
CQ+AY+RIE D IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 422 XXXXXXXXEYNVEPVDNGPXAFTCYLDVXLXRTTTGARVFGAMXGAVDGGLNVPHSIK 595
EYNVE +D P AFTCYLD L RTTTG +VFGA+ GAVDGGL++PHS K
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTK 178
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 261 bits (640), Expect = 1e-69
Identities = 120/178 (67%), Positives = 136/178 (76%)
Frame = +2
Query: 62 MGFVKVVXNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 241
MGFVKVV NK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 242 TCQVAYSRIEXDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 421
CQ+AY+RIE D IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 422 XXXXXXXXEYNVEPVDNGPXAFTCYLDVXLXRTTTGARVFGAMXGAVDGGLNVPHSIK 595
EYNVE +D P AFTCYLD L RTTTG +VFGA+ GAVDGGL++PHS K
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTK 178
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 261 bits (640), Expect = 1e-69
Identities = 120/178 (67%), Positives = 136/178 (76%)
Frame = +2
Query: 62 MGFVKVVXNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 241
MGFVKVV NK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 242 TCQVAYSRIEXDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 421
CQ+AY+RIE D IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 422 XXXXXXXXEYNVEPVDNGPXAFTCYLDVXLXRTTTGARVFGAMXGAVDGGLNVPHSIK 595
EYNVE +D P AFTCYLD L RTTTG +VFGA+ GAVDGGL++PHS K
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTK 178
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 261 bits (640), Expect = 1e-69
Identities = 120/178 (67%), Positives = 136/178 (76%)
Frame = +2
Query: 62 MGFVKVVXNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 241
MGFVKVV NK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 242 TCQVAYSRIEXDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 421
CQ+AY+RIE D IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 422 XXXXXXXXEYNVEPVDNGPXAFTCYLDVXLXRTTTGARVFGAMXGAVDGGLNVPHSIK 595
EYNVE +D P AFTCYLD L RTTTG +VFGA+ GAVDGGL++PHS K
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTK 178
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 261 bits (640), Expect = 1e-69
Identities = 120/178 (67%), Positives = 136/178 (76%)
Frame = +2
Query: 62 MGFVKVVXNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 241
MGFVKVV NK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 242 TCQVAYSRIEXDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 421
CQ+AY+RIE D IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 422 XXXXXXXXEYNVEPVDNGPXAFTCYLDVXLXRTTTGARVFGAMXGAVDGGLNVPHSIK 595
EYNVE +D P AFTCYLD L RTTTG +VFGA+ GAVDGGL++PHS K
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTK 178
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 261 bits (640), Expect = 1e-69
Identities = 120/178 (67%), Positives = 136/178 (76%)
Frame = +2
Query: 62 MGFVKVVXNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 241
MGFVKVV NK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 8 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 67
Query: 242 TCQVAYSRIEXDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 421
CQ+AY+RIE D IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 68 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 127
Query: 422 XXXXXXXXEYNVEPVDNGPXAFTCYLDVXLXRTTTGARVFGAMXGAVDGGLNVPHSIK 595
EYNVE +D P AFTCYLD L RTTTG +VFGA+ GAVDGGL++PHS K
Sbjct: 128 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTK 185
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 259 bits (635), Expect = 5e-69
Identities = 119/178 (66%), Positives = 135/178 (75%)
Frame = +2
Query: 62 MGFVKVVXNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 241
MGFVKVV NK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 242 TCQVAYSRIEXDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 421
CQ+AY+RIE D IVCA Y+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 422 XXXXXXXXEYNVEPVDNGPXAFTCYLDVXLXRTTTGARVFGAMXGAVDGGLNVPHSIK 595
EYNVE +D P AFTCYLD L RTTTG +VFGA+ GAVDGGL++PHS K
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTK 178
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 186 bits (454), Expect = 4e-47
Identities = 82/98 (83%), Positives = 93/98 (94%)
Frame = +2
Query: 62 MGFVKVVXNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 241
MGFVKVV NK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 242 TCQVAYSRIEXDHIVCAAYSHELPRYGVKVGLTNYAAA 355
CQ+AY+RIE D IVCAAY+HELP+YGVKVGLTNYAAA
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAA 98
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 157 bits (382), Expect = 2e-38
Identities = 72/125 (57%), Positives = 86/125 (68%)
Frame = +2
Query: 212 LIVRLSNKDVTCQVAYSRIEXDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXX 391
+IVR++N+D+ CQ+AY+RIE D IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60
Query: 392 XXXXXXXXXXXXXXXXXXEYNVEPVDNGPXAFTCYLDVXLXRTTTGARVFGAMXGAVDGG 571
EYNVE +D P AFTCYLD L RTTTG +VFGA+ GAVDGG
Sbjct: 61 NRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGG 120
Query: 572 LNVPH 586
L++PH
Sbjct: 121 LSIPH 125
>U76609-1|AAB18361.1| 145|Homo sapiens ribosomal L5 protein
protein.
Length = 145
Score = 46.4 bits (105), Expect = 8e-05
Identities = 19/26 (73%), Positives = 23/26 (88%)
Frame = +2
Query: 518 TTTGARVFGAMXGAVDGGLNVPHSIK 595
TTTG +VFGA+ GAVDGGL++PHS K
Sbjct: 1 TTTGNKVFGALKGAVDGGLSIPHSTK 26
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,143,031
Number of Sequences: 237096
Number of extensions: 1574423
Number of successful extensions: 2729
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2652
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2720
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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