Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_F24
         (429 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X15940-1|CAA34066.1|  125|Homo sapiens protein ( Human mRNA for ...   179   3e-45
BC070373-1|AAH70373.1|  125|Homo sapiens ribosomal protein L31 p...   179   3e-45
BC017343-1|AAH17343.1|  125|Homo sapiens ribosomal protein L31 p...   179   3e-45
AC016738-2|AAY14823.1|  125|Homo sapiens unknown protein.             179   3e-45
AB061830-1|BAB79468.1|  125|Homo sapiens ribosomal protein L31 p...   179   3e-45
X69181-1|CAA48925.1|  121|Homo sapiens ribosomal protein L31 pro...   177   1e-44
BC070210-1|AAH70210.1|  121|Homo sapiens RPL31 protein protein.       168   8e-42
AB007180-1|BAA25839.1|   47|Homo sapiens ribosomal protein L31 p...    52   8e-07

>X15940-1|CAA34066.1|  125|Homo sapiens protein ( Human mRNA for
           ribosomal protein L31. ).
          Length = 125

 Score =  179 bits (436), Expect = 3e-45
 Identities = 82/120 (68%), Positives = 99/120 (82%), Gaps = 1/120 (0%)
 Frame = +3

Query: 27  AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 203
           AK  GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R
Sbjct: 4   AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVR 63

Query: 204 VDTRLNKFLWSKGVRNVPFXXXXXXXXXXNDDEXSAHKLFTLVTYVPVASIKGLQTENVD 383
           +DTRLNK +W+KG+RNVP+          N+DE S +KL+TLVTYVPV + K LQT NVD
Sbjct: 64  IDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123


>BC070373-1|AAH70373.1|  125|Homo sapiens ribosomal protein L31
           protein.
          Length = 125

 Score =  179 bits (436), Expect = 3e-45
 Identities = 82/120 (68%), Positives = 99/120 (82%), Gaps = 1/120 (0%)
 Frame = +3

Query: 27  AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 203
           AK  GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R
Sbjct: 4   AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVR 63

Query: 204 VDTRLNKFLWSKGVRNVPFXXXXXXXXXXNDDEXSAHKLFTLVTYVPVASIKGLQTENVD 383
           +DTRLNK +W+KG+RNVP+          N+DE S +KL+TLVTYVPV + K LQT NVD
Sbjct: 64  IDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123


>BC017343-1|AAH17343.1|  125|Homo sapiens ribosomal protein L31
           protein.
          Length = 125

 Score =  179 bits (436), Expect = 3e-45
 Identities = 82/120 (68%), Positives = 99/120 (82%), Gaps = 1/120 (0%)
 Frame = +3

Query: 27  AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 203
           AK  GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R
Sbjct: 4   AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVR 63

Query: 204 VDTRLNKFLWSKGVRNVPFXXXXXXXXXXNDDEXSAHKLFTLVTYVPVASIKGLQTENVD 383
           +DTRLNK +W+KG+RNVP+          N+DE S +KL+TLVTYVPV + K LQT NVD
Sbjct: 64  IDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123


>AC016738-2|AAY14823.1|  125|Homo sapiens unknown protein.
          Length = 125

 Score =  179 bits (436), Expect = 3e-45
 Identities = 82/120 (68%), Positives = 99/120 (82%), Gaps = 1/120 (0%)
 Frame = +3

Query: 27  AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 203
           AK  GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R
Sbjct: 4   AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVR 63

Query: 204 VDTRLNKFLWSKGVRNVPFXXXXXXXXXXNDDEXSAHKLFTLVTYVPVASIKGLQTENVD 383
           +DTRLNK +W+KG+RNVP+          N+DE S +KL+TLVTYVPV + K LQT NVD
Sbjct: 64  IDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123


>AB061830-1|BAB79468.1|  125|Homo sapiens ribosomal protein L31
           protein.
          Length = 125

 Score =  179 bits (436), Expect = 3e-45
 Identities = 82/120 (68%), Positives = 99/120 (82%), Gaps = 1/120 (0%)
 Frame = +3

Query: 27  AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 203
           AK  GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R
Sbjct: 4   AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVR 63

Query: 204 VDTRLNKFLWSKGVRNVPFXXXXXXXXXXNDDEXSAHKLFTLVTYVPVASIKGLQTENVD 383
           +DTRLNK +W+KG+RNVP+          N+DE S +KL+TLVTYVPV + K LQT NVD
Sbjct: 64  IDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 123


>X69181-1|CAA48925.1|  121|Homo sapiens ribosomal protein L31
           protein.
          Length = 121

 Score =  177 bits (432), Expect = 1e-44
 Identities = 81/119 (68%), Positives = 98/119 (82%), Gaps = 1/119 (0%)
 Frame = +3

Query: 30  KPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIRV 206
           K  GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R+
Sbjct: 1   KKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRI 60

Query: 207 DTRLNKFLWSKGVRNVPFXXXXXXXXXXNDDEXSAHKLFTLVTYVPVASIKGLQTENVD 383
           DTRLNK +W+KG+RNVP+          N+DE S +KL+TLVTYVPV + K LQT NVD
Sbjct: 61  DTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 119


>BC070210-1|AAH70210.1|  121|Homo sapiens RPL31 protein protein.
          Length = 121

 Score =  168 bits (408), Expect = 8e-42
 Identities = 76/112 (67%), Positives = 93/112 (83%), Gaps = 1/112 (0%)
 Frame = +3

Query: 27  AKPKGERK-GKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 203
           AK  GE+K G+SAINEVVTREYT+N+HKR+HGVGFKKRAPRA+KEIRKFA K+MGTPD+R
Sbjct: 4   AKKGGEKKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVR 63

Query: 204 VDTRLNKFLWSKGVRNVPFXXXXXXXXXXNDDEXSAHKLFTLVTYVPVASIK 359
           +DTRLNK +W+KG+RNVP+          N+DE S +KL+TLVTYVPV + K
Sbjct: 64  IDTRLNKAVWAKGIRNVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFK 115


>AB007180-1|BAA25839.1|   47|Homo sapiens ribosomal protein L31
           protein.
          Length = 47

 Score = 52.0 bits (119), Expect = 8e-07
 Identities = 24/45 (53%), Positives = 29/45 (64%)
 Frame = +3

Query: 249 NVPFXXXXXXXXXXNDDEXSAHKLFTLVTYVPVASIKGLQTENVD 383
           NVP+          N+DE S +KL+TLVTYVPV + K LQT NVD
Sbjct: 1   NVPYRIRVRLSRKRNEDEDSPNKLYTLVTYVPVTTFKNLQTVNVD 45


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,429,155
Number of Sequences: 237096
Number of extensions: 980112
Number of successful extensions: 5240
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5240
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3373625546
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)