Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_F24
         (429 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113508-1|AAM29513.1|  124|Drosophila melanogaster RE59131p pro...   173   1e-43
AE013599-889|AAM71074.1|  124|Drosophila melanogaster CG1821-PC,...   173   1e-43
AE013599-888|AAF58920.1|  124|Drosophila melanogaster CG1821-PB,...   173   1e-43
AE013599-887|AAM71073.1|  124|Drosophila melanogaster CG1821-PA,...   173   1e-43
AY095051-1|AAM11379.1| 1838|Drosophila melanogaster LD40310p pro...    28   4.6  
AE014134-1014|AAN10569.1| 1838|Drosophila melanogaster CG9088-PB...    28   4.6  
AE014134-1013|AAF52319.1| 1838|Drosophila melanogaster CG9088-PA...    28   4.6  

>AY113508-1|AAM29513.1|  124|Drosophila melanogaster RE59131p
           protein.
          Length = 124

 Score =  173 bits (420), Expect = 1e-43
 Identities = 79/124 (63%), Positives = 98/124 (79%)
 Frame = +3

Query: 24  MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 203
           M K KGE+  KSAINEVVTRE T++L KR+H +GFKKRAPRAIKEIRKFAE++MGT D+R
Sbjct: 1   MTKTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVR 60

Query: 204 VDTRLNKFLWSKGVRNVPFXXXXXXXXXXNDDEXSAHKLFTLVTYVPVASIKGLQTENVD 383
           +DTRLNK +WSKG+R+ PF          NDDE S +KL+T VTYVPV++ K LQTENV+
Sbjct: 61  IDTRLNKHIWSKGIRSTPFRIRVRLARRRNDDEDSPNKLYTYVTYVPVSTFKNLQTENVE 120

Query: 384 ASQE 395
           +S +
Sbjct: 121 SSDD 124


>AE013599-889|AAM71074.1|  124|Drosophila melanogaster CG1821-PC,
           isoform C protein.
          Length = 124

 Score =  173 bits (420), Expect = 1e-43
 Identities = 79/124 (63%), Positives = 98/124 (79%)
 Frame = +3

Query: 24  MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 203
           M K KGE+  KSAINEVVTRE T++L KR+H +GFKKRAPRAIKEIRKFAE++MGT D+R
Sbjct: 1   MTKTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVR 60

Query: 204 VDTRLNKFLWSKGVRNVPFXXXXXXXXXXNDDEXSAHKLFTLVTYVPVASIKGLQTENVD 383
           +DTRLNK +WSKG+R+ PF          NDDE S +KL+T VTYVPV++ K LQTENV+
Sbjct: 61  IDTRLNKHIWSKGIRSTPFRIRVRLARRRNDDEDSPNKLYTYVTYVPVSTFKNLQTENVE 120

Query: 384 ASQE 395
           +S +
Sbjct: 121 SSDD 124


>AE013599-888|AAF58920.1|  124|Drosophila melanogaster CG1821-PB,
           isoform B protein.
          Length = 124

 Score =  173 bits (420), Expect = 1e-43
 Identities = 79/124 (63%), Positives = 98/124 (79%)
 Frame = +3

Query: 24  MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 203
           M K KGE+  KSAINEVVTRE T++L KR+H +GFKKRAPRAIKEIRKFAE++MGT D+R
Sbjct: 1   MTKTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVR 60

Query: 204 VDTRLNKFLWSKGVRNVPFXXXXXXXXXXNDDEXSAHKLFTLVTYVPVASIKGLQTENVD 383
           +DTRLNK +WSKG+R+ PF          NDDE S +KL+T VTYVPV++ K LQTENV+
Sbjct: 61  IDTRLNKHIWSKGIRSTPFRIRVRLARRRNDDEDSPNKLYTYVTYVPVSTFKNLQTENVE 120

Query: 384 ASQE 395
           +S +
Sbjct: 121 SSDD 124


>AE013599-887|AAM71073.1|  124|Drosophila melanogaster CG1821-PA,
           isoform A protein.
          Length = 124

 Score =  173 bits (420), Expect = 1e-43
 Identities = 79/124 (63%), Positives = 98/124 (79%)
 Frame = +3

Query: 24  MAKPKGERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDIR 203
           M K KGE+  KSAINEVVTRE T++L KR+H +GFKKRAPRAIKEIRKFAE++MGT D+R
Sbjct: 1   MTKTKGEKINKSAINEVVTRECTIHLAKRVHNIGFKKRAPRAIKEIRKFAEREMGTTDVR 60

Query: 204 VDTRLNKFLWSKGVRNVPFXXXXXXXXXXNDDEXSAHKLFTLVTYVPVASIKGLQTENVD 383
           +DTRLNK +WSKG+R+ PF          NDDE S +KL+T VTYVPV++ K LQTENV+
Sbjct: 61  IDTRLNKHIWSKGIRSTPFRIRVRLARRRNDDEDSPNKLYTYVTYVPVSTFKNLQTENVE 120

Query: 384 ASQE 395
           +S +
Sbjct: 121 SSDD 124


>AY095051-1|AAM11379.1| 1838|Drosophila melanogaster LD40310p
           protein.
          Length = 1838

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +3

Query: 57  SAINEVVTREYTVNLHKRLHGVGFKKRA 140
           S+I+E VT EY  +LH   HG GF  ++
Sbjct: 554 SSIDEDVTVEYGADLHTMDHGSGFPTKS 581


>AE014134-1014|AAN10569.1| 1838|Drosophila melanogaster CG9088-PB,
           isoform B protein.
          Length = 1838

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +3

Query: 57  SAINEVVTREYTVNLHKRLHGVGFKKRA 140
           S+I+E VT EY  +LH   HG GF  ++
Sbjct: 554 SSIDEDVTVEYGADLHTMDHGSGFPTKS 581


>AE014134-1013|AAF52319.1| 1838|Drosophila melanogaster CG9088-PA,
           isoform A protein.
          Length = 1838

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +3

Query: 57  SAINEVVTREYTVNLHKRLHGVGFKKRA 140
           S+I+E VT EY  +LH   HG GF  ++
Sbjct: 554 SSIDEDVTVEYGADLHTMDHGSGFPTKS 581


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,179,817
Number of Sequences: 53049
Number of extensions: 321375
Number of successful extensions: 719
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 714
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1334434944
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)