Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_F23
         (649 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    25   1.6  
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    25   2.7  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    24   3.6  
CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein...    23   6.3  
AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.            23   6.3  
AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical prot...    23   8.3  

>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = +1

Query: 97  CGPKLSLCGLVLSVWGIIQLTLMGVFYYIRAVALLED 207
           C PK+ + G+VL+V  ++ L  M V    + +  + D
Sbjct: 762 CPPKVFMLGIVLAVIAVVVLIGMAVLLLWKVLTSIHD 798


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +1

Query: 10  LIRQLAGRYLVLNDFNYLAQKLYKMGCKL 96
           L  +   ++ + NDFN+L  ++Y +GC L
Sbjct: 512 LFDEALNQFCISNDFNFLTVRVY-VGCWL 539


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 351 KLMSRYNQCNQVQQCRNPTVLCIQGIS 271
           +L+ +YNQ +Q  QC    +L   G S
Sbjct: 360 ELLRKYNQSSQGSQCNQAIMLITDGPS 386


>CR954257-13|CAJ14164.1|  420|Anopheles gambiae predicted protein
           protein.
          Length = 420

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +2

Query: 593 VNLSHSPPH*TILYLSHPI 649
           + +SH PPH   L+L+HPI
Sbjct: 51  LKISH-PPHYWELFLAHPI 68


>AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.
          Length = 420

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +2

Query: 593 VNLSHSPPH*TILYLSHPI 649
           + +SH PPH   L+L+HPI
Sbjct: 51  LKISH-PPHYWELFLAHPI 68


>AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical protein
           protein.
          Length = 257

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = -2

Query: 471 LHIATCFWQKKKQFYNGMELTAKITTPSILHXN 373
           L +   F Q+ KQF N     AK  +P   H N
Sbjct: 144 LRLKHTFAQEAKQFCNAEIRAAKADSPENCHSN 176


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 664,501
Number of Sequences: 2352
Number of extensions: 13749
Number of successful extensions: 22
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)