Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_F20
         (518 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-1255|AAF54603.1|  172|Drosophila melanogaster CG4800-PA...   161   5e-40
AY058482-1|AAZ67515.1|  172|Drosophila melanogaster GM13045p pro...   159   2e-39

>AE014297-1255|AAF54603.1|  172|Drosophila melanogaster CG4800-PA
           protein.
          Length = 172

 Score =  161 bits (391), Expect = 5e-40
 Identities = 76/105 (72%), Positives = 82/105 (78%)
 Frame = +3

Query: 204 DIXIEGFNPSAEEADEGTDSAVESGVDIVLNHRLVETYAFGDXKSYTLYLKDYMXXXXXX 383
           DI +EG N SAEEADEGTD   ESGVD+VLNHRL E +AFGD KSYTLYLKDYM      
Sbjct: 41  DIKLEGANASAEEADEGTDITSESGVDVVLNHRLTECFAFGDKKSYTLYLKDYMKKVLAK 100

Query: 384 XXXXAPDQLEXFKTNMNKXMKDXLGRFKELQFFTGESMDCDGXVA 518
               +PDQ++ FKTNMNK MKD LGRFKELQFFTGESMDCDG VA
Sbjct: 101 LEEKSPDQVDIFKTNMNKAMKDILGRFKELQFFTGESMDCDGMVA 145



 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 22/27 (81%), Positives = 25/27 (92%)
 Frame = +2

Query: 113 DEMFSDTYKMKLVDEVIYEVTGXLVTR 193
           DEMF+DTYKMKLVD+VIYEV G L+TR
Sbjct: 11  DEMFADTYKMKLVDDVIYEVYGKLITR 37


>AY058482-1|AAZ67515.1|  172|Drosophila melanogaster GM13045p
           protein.
          Length = 172

 Score =  159 bits (386), Expect = 2e-39
 Identities = 75/105 (71%), Positives = 81/105 (77%)
 Frame = +3

Query: 204 DIXIEGFNPSAEEADEGTDSAVESGVDIVLNHRLVETYAFGDXKSYTLYLKDYMXXXXXX 383
           DI +EG N SAEEADEGTD   ESGVD+VLNHRL E +AFGD KSYTLYL DYM      
Sbjct: 41  DIKLEGANASAEEADEGTDITSESGVDVVLNHRLTECFAFGDKKSYTLYLNDYMKKVLAK 100

Query: 384 XXXXAPDQLEXFKTNMNKXMKDXLGRFKELQFFTGESMDCDGXVA 518
               +PDQ++ FKTNMNK MKD LGRFKELQFFTGESMDCDG VA
Sbjct: 101 LEEKSPDQVDIFKTNMNKAMKDILGRFKELQFFTGESMDCDGMVA 145



 Score = 50.8 bits (116), Expect = 1e-06
 Identities = 22/27 (81%), Positives = 25/27 (92%)
 Frame = +2

Query: 113 DEMFSDTYKMKLVDEVIYEVTGXLVTR 193
           DEMF+DTYKMKLVD+VIYEV G L+TR
Sbjct: 11  DEMFADTYKMKLVDDVIYEVYGKLITR 37


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,182,624
Number of Sequences: 53049
Number of extensions: 287534
Number of successful extensions: 362
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 362
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1908489216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)