Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_F18
         (544 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    25   1.6  
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    24   2.8  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    24   2.8  
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    24   2.8  

>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = -3

Query: 152 PGTGRRQSVQATFDSLGQ-RSHTDSLRPVLSAQLITASQLGDPG 24
           PGTG R S+Q   D + Q RS +    PV   Q    S +   G
Sbjct: 24  PGTGDRASIQRLEDEMVQERSFSQRALPVPRTQNRNGSPINHQG 67


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 11/46 (23%), Positives = 24/46 (52%)
 Frame = +3

Query: 228 QRKPFXRRDGXFIYFEDNAGVIXNNKGEMKGSAITGPVAKECADLW 365
           +R+   RR+      +++  V+  +KG ++G  +  P  K+  D+W
Sbjct: 147 RRRGLTRRESNSDANDNDPLVVNTDKGRIRGITVDAPSGKK-VDVW 191


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 11/46 (23%), Positives = 24/46 (52%)
 Frame = +3

Query: 228 QRKPFXRRDGXFIYFEDNAGVIXNNKGEMKGSAITGPVAKECADLW 365
           +R+   RR+      +++  V+  +KG ++G  +  P  K+  D+W
Sbjct: 147 RRRGLTRRESNSDANDNDPLVVNTDKGRIRGITVDAPSGKK-VDVW 191


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 24.2 bits (50), Expect = 2.8
 Identities = 11/46 (23%), Positives = 24/46 (52%)
 Frame = +3

Query: 228 QRKPFXRRDGXFIYFEDNAGVIXNNKGEMKGSAITGPVAKECADLW 365
           +R+   RR+      +++  V+  +KG ++G  +  P  K+  D+W
Sbjct: 33  RRRGLTRRESNSDANDNDPLVVNTDKGRIRGITVDAPSGKK-VDVW 77


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 543,151
Number of Sequences: 2352
Number of extensions: 10907
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50040333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)