Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_F18
(544 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE013599-3487|AAF46914.1| 140|Drosophila melanogaster CG3661-PA... 173 1e-43
M85295-1|AAA28867.1| 140|Drosophila melanogaster ribosomal prot... 159 3e-39
AY058367-1|AAL13596.1| 378|Drosophila melanogaster GH13802p pro... 30 1.8
AE014298-3055|AAF50879.1| 378|Drosophila melanogaster CG1314-PA... 30 1.8
U43733-1|AAA86639.1| 904|Drosophila melanogaster Abrupt protein. 29 5.4
BT003807-1|AAO41490.1| 369|Drosophila melanogaster AT11330p pro... 29 5.4
BT001583-1|AAN71338.1| 894|Drosophila melanogaster RE25924p pro... 29 5.4
AE014134-2051|AAN10774.1| 894|Drosophila melanogaster CG4807-PB... 29 5.4
AE014134-2050|AAF53087.2| 904|Drosophila melanogaster CG4807-PA... 29 5.4
>AE013599-3487|AAF46914.1| 140|Drosophila melanogaster CG3661-PA
protein.
Length = 140
Score = 173 bits (421), Expect = 1e-43
Identities = 81/87 (93%), Positives = 82/87 (94%)
Frame = +3
Query: 111 IKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFXRRDGXFIYFEDNAGV 290
I+GRLNRLPAAG GDM VATVKKGKPELRKKVMPAVVIRQRKPF RRDG FIYFEDNAGV
Sbjct: 45 IRGRLNRLPAAGVGDMFVATVKKGKPELRKKVMPAVVIRQRKPFRRRDGVFIYFEDNAGV 104
Query: 291 IXNNKGEMKGSAITGPVAKECADLWPR 371
I NNKGEMKGSAITGPVAKECADLWPR
Sbjct: 105 IVNNKGEMKGSAITGPVAKECADLWPR 131
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/33 (66%), Positives = 24/33 (72%)
Frame = +2
Query: 11 QFRISLGLPAGKQ*STAPTTQGAKNLYVIAVQG 109
+FRISLGLP G + A T GAKNLYVIAV G
Sbjct: 13 KFRISLGLPVGAVMNCADNT-GAKNLYVIAVHG 44
>M85295-1|AAA28867.1| 140|Drosophila melanogaster ribosomal protein
L17A protein.
Length = 140
Score = 159 bits (385), Expect = 3e-39
Identities = 75/87 (86%), Positives = 76/87 (87%)
Frame = +3
Query: 111 IKGRLNRLPAAGSGDMIVATVKKGKPELRKKVMPAVVIRQRKPFXRRDGXFIYFEDNAGV 290
I+GRLNRLPAAG GDM VATVKKGKPELRKKV RQRKPF RRDG FIYFEDNAGV
Sbjct: 45 IRGRLNRLPAAGVGDMFVATVKKGKPELRKKVSVVPSARQRKPFRRRDGVFIYFEDNAGV 104
Query: 291 IXNNKGEMKGSAITGPVAKECADLWPR 371
I NNKGEMKGSAITGPVAKECADLWPR
Sbjct: 105 IVNNKGEMKGSAITGPVAKECADLWPR 131
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/33 (66%), Positives = 24/33 (72%)
Frame = +2
Query: 11 QFRISLGLPAGKQ*STAPTTQGAKNLYVIAVQG 109
+FRISLGLP G + A T GAKNLYVIAV G
Sbjct: 13 KFRISLGLPVGAVMNCADNT-GAKNLYVIAVHG 44
>AY058367-1|AAL13596.1| 378|Drosophila melanogaster GH13802p
protein.
Length = 378
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +1
Query: 343 PKNVLICGRVLPQTRAL*LEYTFKISNCVSLSFPSTSKSNPKNYNLRNXHLQCKC 507
PK + +CG+ LP+ R SNCV L + + +N NL N + +C
Sbjct: 178 PKVLKLCGKSLPEDRGK--------SNCVGLMIYESGNNATRNLNLPNIYKDWEC 224
>AE014298-3055|AAF50879.1| 378|Drosophila melanogaster CG1314-PA
protein.
Length = 378
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +1
Query: 343 PKNVLICGRVLPQTRAL*LEYTFKISNCVSLSFPSTSKSNPKNYNLRNXHLQCKC 507
PK + +CG+ LP+ R SNCV L + + +N NL N + +C
Sbjct: 178 PKVLKLCGKSLPEDRGK--------SNCVGLMIYESGNNATRNLNLPNIYKDWEC 224
>U43733-1|AAA86639.1| 904|Drosophila melanogaster Abrupt protein.
Length = 904
Score = 28.7 bits (61), Expect = 5.4
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = -1
Query: 256 PSRLXNGFRCLMTTAGITFFRSSGLPFLTVATIMSPEPAAGSLFRRPLIALDS 98
P L F AG F SG P LT+ IM E AAG+L +AL+S
Sbjct: 795 PGLLPGQFDLSKLAAGNPAFGQSG-PGLTIEPIMRHEQAAGNLSPNRPLALNS 846
>BT003807-1|AAO41490.1| 369|Drosophila melanogaster AT11330p
protein.
Length = 369
Score = 28.7 bits (61), Expect = 5.4
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = -1
Query: 256 PSRLXNGFRCLMTTAGITFFRSSGLPFLTVATIMSPEPAAGSLFRRPLIALDS 98
P L F AG F SG P LT+ IM E AAG+L +AL+S
Sbjct: 260 PGLLPGQFDLSKLAAGNPAFGQSG-PGLTIEPIMRHEQAAGNLSPNRPLALNS 311
>BT001583-1|AAN71338.1| 894|Drosophila melanogaster RE25924p
protein.
Length = 894
Score = 28.7 bits (61), Expect = 5.4
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = -1
Query: 256 PSRLXNGFRCLMTTAGITFFRSSGLPFLTVATIMSPEPAAGSLFRRPLIALDS 98
P L F AG F SG P LT+ IM E AAG+L +AL+S
Sbjct: 785 PGLLPGQFDLSKLAAGNPAFGQSG-PGLTIEPIMRHEQAAGNLSPNRPLALNS 836
>AE014134-2051|AAN10774.1| 894|Drosophila melanogaster CG4807-PB,
isoform B protein.
Length = 894
Score = 28.7 bits (61), Expect = 5.4
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = -1
Query: 256 PSRLXNGFRCLMTTAGITFFRSSGLPFLTVATIMSPEPAAGSLFRRPLIALDS 98
P L F AG F SG P LT+ IM E AAG+L +AL+S
Sbjct: 785 PGLLPGQFDLSKLAAGNPAFGQSG-PGLTIEPIMRHEQAAGNLSPNRPLALNS 836
>AE014134-2050|AAF53087.2| 904|Drosophila melanogaster CG4807-PA,
isoform A protein.
Length = 904
Score = 28.7 bits (61), Expect = 5.4
Identities = 21/53 (39%), Positives = 25/53 (47%)
Frame = -1
Query: 256 PSRLXNGFRCLMTTAGITFFRSSGLPFLTVATIMSPEPAAGSLFRRPLIALDS 98
P L F AG F SG P LT+ IM E AAG+L +AL+S
Sbjct: 795 PGLLPGQFDLSKLAAGNPAFGQSG-PGLTIEPIMRHEQAAGNLSPNRPLALNS 846
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,519,622
Number of Sequences: 53049
Number of extensions: 477225
Number of successful extensions: 1170
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1168
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2074444800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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