Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_F18
         (544 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    25   0.50 
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    24   0.87 
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    23   2.0  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    23   2.7  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    23   2.7  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    23   2.7  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    22   3.5  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   3.5  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   6.1  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 25.0 bits (52), Expect = 0.50
 Identities = 15/60 (25%), Positives = 22/60 (36%)
 Frame = -3

Query: 221 DHCRHYLFPEFRFTLFDCGHNHVPGTGRRQSVQATFDSLGQRSHTDSLRPVLSAQLITAS 42
           D C  Y +    +T  DCG    P   +R   Q   + +   S       V+S   I A+
Sbjct: 471 DQCEEYEYVHDEYTCMDCGPGKWPHEDKRGCYQLAINHIRWNSAFAIAPAVISCLGIVAT 530


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 24.2 bits (50), Expect = 0.87
 Identities = 15/60 (25%), Positives = 22/60 (36%)
 Frame = -3

Query: 221 DHCRHYLFPEFRFTLFDCGHNHVPGTGRRQSVQATFDSLGQRSHTDSLRPVLSAQLITAS 42
           D C  Y +    +T  DCG    P   +R   Q   + +   S       V+S   I A+
Sbjct: 561 DQCEEYEYVYDEYTCMDCGPGKWPHEDKRGCYQLAINHIRWNSAFAIAPAVISCLGIVAT 620


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 93  TYRFFAPCVVGAVDY 49
           T RF+  CVV A DY
Sbjct: 467 TTRFYTACVVEAFDY 481


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +1

Query: 430 SLSFPSTSKSNPKNYNLRNXHLQCKCAKLEY 522
           SLS  +   +N   YN  N +    C KL Y
Sbjct: 84  SLSNKTIHNNNNYKYNYNNNNYNNNCKKLYY 114


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +1

Query: 430 SLSFPSTSKSNPKNYNLRNXHLQCKCAKLEY 522
           SLS  +   +N   YN  N +    C KL Y
Sbjct: 84  SLSNKTIHNNNNYKYNYNNNNYNNNCKKLYY 114


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +1

Query: 430 SLSFPSTSKSNPKNYNLRNXHLQCKCAKLEY 522
           SLS  +   +N   YN  N +    C KL Y
Sbjct: 84  SLSNKTIHNNNNYKYNYNNNNYNNNCKKLYY 114


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +1

Query: 430 SLSFPSTSKSNPKNYNLRNXHLQCKCAKLEY 522
           SLS  +   +N   YN  N +    C KL Y
Sbjct: 84  SLSNRTIHNNNNYKYNYNNNNYNNNCKKLYY 114


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 10/35 (28%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +1

Query: 145 VPGT*LWPQSKRVNLNSGKR--*CRQWSSGSGNRS 243
           +P T LW ++ R+ +++ K+    + WS  S N +
Sbjct: 439 IPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNA 473


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 37  SWEAVINCADNTGRKESVCDRC 102
           S + VI+   +TG K  VC  C
Sbjct: 188 SGQLVIHMRTHTGEKPYVCKAC 209


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,587
Number of Sequences: 438
Number of extensions: 2673
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15459066
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)