Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_F17
         (651 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    26   0.90 
AF283265-1|AAG15372.1|   67|Anopheles gambiae beta-hexosaminidas...    26   0.90 
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   1.6  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   3.6  
DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           24   4.8  
AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    24   4.8  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    24   4.8  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            23   6.3  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 26.2 bits (55), Expect = 0.90
 Identities = 13/38 (34%), Positives = 17/38 (44%)
 Frame = +2

Query: 47  AVPAAYRSIVVVVPTGSHRVPAPSPMEDPEPGCGPKPR 160
           A PA   S+  VVP+     P   P + P     P+PR
Sbjct: 82  ASPAPQPSLAPVVPSSVVTAPPARPSQPPTTRFAPEPR 119



 Score = 26.2 bits (55), Expect = 0.90
 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 5/49 (10%)
 Frame = +2

Query: 41  PGAVPAAYRSIVVVVPT--GSHRVPA---PSPMEDPEPGCGPKPRRGAQ 172
           PGAVP     +    P+  G  R P    P P+  P P  GP+P+   Q
Sbjct: 234 PGAVPGMQPGMQPRPPSAQGMQRPPMMGQPPPIRPPNPMGGPRPQISPQ 282


>AF283265-1|AAG15372.1|   67|Anopheles gambiae beta-hexosaminidase,
           beta chain protein.
          Length = 67

 Score = 26.2 bits (55), Expect = 0.90
 Identities = 12/46 (26%), Positives = 20/46 (43%)
 Frame = -2

Query: 296 WASPAXARDALPPVK*ARPATAERTWTSLPAESSDEHLPRVVGHLC 159
           W+      + LP +     ATAE+ W+     ++DE   R+    C
Sbjct: 3   WSEVVNGHNILPRIFPRVXATAEKLWSPASVNNADEAARRLEEQTC 48


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = -1

Query: 144 HPGSGSSMGLGAGTRCE-PVGTTTTIERYAAGTAP 43
           HP  G SMGLG     + P G++  +   +AG  P
Sbjct: 584 HPSLGLSMGLGLPQVPQPPAGSSLNLSHPSAGMVP 618



 Score = 23.0 bits (47), Expect = 8.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 68  SIVVVVPTGSHRVPAPSP 121
           ++V   PTG H + +PSP
Sbjct: 702 AVVSSSPTGGHHLASPSP 719


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -1

Query: 177 GRWAPLRGFGPHPGSGSSMGLGAG 106
           G   PLRG     G GSS G G+G
Sbjct: 843 GAGGPLRGSSGGAGGGSSGGGGSG 866


>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = +1

Query: 112 PEPHGRPRTRMWPEAPQRCPTTRGRCSSEDSAG 210
           P+P    R R  P A +R P TR     + SAG
Sbjct: 163 PQPARPYRVRRAPRAERRHPYTRRSGGQQRSAG 195


>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 8/21 (38%), Positives = 16/21 (76%)
 Frame = -1

Query: 510 SNVKKRNFHQY*PVERYPIPL 448
           +NV+K ++ +  P++RY IP+
Sbjct: 187 TNVRKSSYTKPTPIQRYAIPI 207


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +2

Query: 89  TGSHRVPAPSPMEDPEPGCGPKPRRGAQ 172
           T ++ +P PS  +  +P   P PR  +Q
Sbjct: 623 TANNVIPPPSAYQQQQPPVVPPPRTNSQ 650


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -3

Query: 238 PPPSVPGLVCQLSPPTNIFPGSLGTSAGLR 149
           PPP+ P       PP+ +  G LG  AG R
Sbjct: 581 PPPAPPPPPPMGPPPSPLAGGPLGGPAGSR 610


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 676,402
Number of Sequences: 2352
Number of extensions: 14689
Number of successful extensions: 45
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)