Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_F17
(651 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY122226-1|AAM52738.1| 369|Drosophila melanogaster RE25373p pro... 55 7e-08
AE014296-2876|AAF49366.3| 369|Drosophila melanogaster CG32169-P... 55 7e-08
X79340-1|CAA55898.2| 213|Drosophila melanogaster musashi protein. 35 0.11
X79339-1|CAA55897.1| 606|Drosophila melanogaster musashi protein. 35 0.11
AY119171-1|AAM51031.1| 634|Drosophila melanogaster RH49436p pro... 35 0.11
AY051802-1|AAK93226.1| 606|Drosophila melanogaster LD31631p pro... 35 0.11
AE014297-3816|AAF56478.2| 606|Drosophila melanogaster CG5099-PA... 35 0.11
AE014297-3812|AAN14056.2| 634|Drosophila melanogaster CG5099-PB... 35 0.11
S51715-1|AAB24627.1| 44|Drosophila melanogaster RNA recognitio... 30 2.4
AY122186-1|AAM52698.1| 1038|Drosophila melanogaster LD43109p pro... 30 2.4
AE013599-2800|AAF57614.1| 1038|Drosophila melanogaster CG15104-P... 30 2.4
X62639-1|CAA44505.1| 385|Drosophila melanogaster hrp48.1 protein. 30 3.1
DQ062784-1|AAY56657.1| 421|Drosophila melanogaster heterogeneou... 30 3.1
AY128430-1|AAM75023.1| 421|Drosophila melanogaster GH26816p pro... 30 3.1
AY069699-1|AAL39844.1| 421|Drosophila melanogaster LD46853p pro... 30 3.1
AE014297-4290|ABI31212.1| 1704|Drosophila melanogaster CG33553-P... 30 3.1
AE014297-4289|AAO41610.1| 2063|Drosophila melanogaster CG33553-P... 30 3.1
AE014296-2961|AAF49305.2| 1526|Drosophila melanogaster CG32186-P... 30 3.1
AE014134-1193|AAN10605.1| 421|Drosophila melanogaster CG10377-P... 30 3.1
AE014134-1192|AAF52457.1| 421|Drosophila melanogaster CG10377-P... 30 3.1
AE014134-1191|AAF52456.1| 421|Drosophila melanogaster CG10377-P... 30 3.1
BT022484-1|AAY54900.1| 489|Drosophila melanogaster IP11785p pro... 29 4.1
BT016106-1|AAV36991.1| 840|Drosophila melanogaster LD20133p pro... 29 4.1
AE014298-2877|AAF48974.1| 348|Drosophila melanogaster CG14218-P... 29 4.1
AE014298-1168|AAF46366.1| 926|Drosophila melanogaster CG10555-P... 29 4.1
AE014134-1157|AAF52432.1| 992|Drosophila melanogaster CG11323-P... 29 4.1
M63711-1|AAA28542.1| 1043|Drosophila melanogaster FTZ-F1 protein. 29 7.2
AE014296-3055|AAF49231.2| 1027|Drosophila melanogaster CG4059-PB... 29 7.2
AE014296-2923|AAF49329.1| 680|Drosophila melanogaster CG6311-PB... 29 7.2
X62638-1|CAA44504.1| 345|Drosophila melanogaster hrp40.2 protein. 28 9.6
X62637-1|CAA44503.1| 321|Drosophila melanogaster hrp40.1 protein. 28 9.6
S62100-1|AAB26989.1| 308|Drosophila melanogaster SqdB protein. 28 9.6
S61875-1|AAB26988.1| 321|Drosophila melanogaster SqdA protein. 28 9.6
BT023832-1|AAZ86753.1| 308|Drosophila melanogaster LD29474p pro... 28 9.6
AY118501-1|AAM49870.1| 321|Drosophila melanogaster LD09691p pro... 28 9.6
AE014297-1708|AAF54964.2| 321|Drosophila melanogaster CG16901-P... 28 9.6
AE014297-1706|AAF54963.2| 344|Drosophila melanogaster CG16901-P... 28 9.6
AE014297-1705|AAN13570.1| 308|Drosophila melanogaster CG16901-P... 28 9.6
AE014134-980|AAF52296.1| 116|Drosophila melanogaster CG9029-PA ... 28 9.6
>AY122226-1|AAM52738.1| 369|Drosophila melanogaster RE25373p
protein.
Length = 369
Score = 55.2 bits (127), Expect = 7e-08
Identities = 22/26 (84%), Positives = 25/26 (96%)
Frame = +3
Query: 153 SPAEVPNDPGKMFVGGLSWQTSPGTL 230
SP+EVPNDPGKMF+GGLSWQTSP +L
Sbjct: 20 SPSEVPNDPGKMFIGGLSWQTSPESL 45
>AE014296-2876|AAF49366.3| 369|Drosophila melanogaster CG32169-PA
protein.
Length = 369
Score = 55.2 bits (127), Expect = 7e-08
Identities = 22/26 (84%), Positives = 25/26 (96%)
Frame = +3
Query: 153 SPAEVPNDPGKMFVGGLSWQTSPGTL 230
SP+EVPNDPGKMF+GGLSWQTSP +L
Sbjct: 20 SPSEVPNDPGKMFIGGLSWQTSPESL 45
>X79340-1|CAA55898.2| 213|Drosophila melanogaster musashi protein.
Length = 213
Score = 34.7 bits (76), Expect = 0.11
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +3
Query: 177 PGKMFVGGLSWQTSPGTL 230
PGK+FVGGLSWQTS L
Sbjct: 174 PGKLFVGGLSWQTSSDKL 191
>X79339-1|CAA55897.1| 606|Drosophila melanogaster musashi protein.
Length = 606
Score = 34.7 bits (76), Expect = 0.11
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +3
Query: 177 PGKMFVGGLSWQTSPGTL 230
PGK+FVGGLSWQTS L
Sbjct: 174 PGKLFVGGLSWQTSSDKL 191
>AY119171-1|AAM51031.1| 634|Drosophila melanogaster RH49436p
protein.
Length = 634
Score = 34.7 bits (76), Expect = 0.11
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +3
Query: 177 PGKMFVGGLSWQTSPGTL 230
PGK+FVGGLSWQTS L
Sbjct: 202 PGKLFVGGLSWQTSSDKL 219
>AY051802-1|AAK93226.1| 606|Drosophila melanogaster LD31631p
protein.
Length = 606
Score = 34.7 bits (76), Expect = 0.11
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +3
Query: 177 PGKMFVGGLSWQTSPGTL 230
PGK+FVGGLSWQTS L
Sbjct: 174 PGKLFVGGLSWQTSSDKL 191
>AE014297-3816|AAF56478.2| 606|Drosophila melanogaster CG5099-PA,
isoform A protein.
Length = 606
Score = 34.7 bits (76), Expect = 0.11
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +3
Query: 177 PGKMFVGGLSWQTSPGTL 230
PGK+FVGGLSWQTS L
Sbjct: 174 PGKLFVGGLSWQTSSDKL 191
>AE014297-3812|AAN14056.2| 634|Drosophila melanogaster CG5099-PB,
isoform B protein.
Length = 634
Score = 34.7 bits (76), Expect = 0.11
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +3
Query: 177 PGKMFVGGLSWQTSPGTL 230
PGK+FVGGLSWQTS L
Sbjct: 202 PGKLFVGGLSWQTSSDKL 219
>S51715-1|AAB24627.1| 44|Drosophila melanogaster RNA recognition
motif-type RNA-binding protein protein.
Length = 44
Score = 30.3 bits (65), Expect = 2.4
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3
Query: 189 FVGGLSWQTSPGTL 230
FVGGLSWQTSP +L
Sbjct: 1 FVGGLSWQTSPESL 14
>AY122186-1|AAM52698.1| 1038|Drosophila melanogaster LD43109p
protein.
Length = 1038
Score = 30.3 bits (65), Expect = 2.4
Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = +2
Query: 98 HRVPAPSPMEDPEPGC-GPKPRRGAQRPGE 184
H PSP ED EPGC PK RR +
Sbjct: 816 HSRMTPSPREDNEPGCSAPKRRRSCSHSNQ 845
>AE013599-2800|AAF57614.1| 1038|Drosophila melanogaster CG15104-PA
protein.
Length = 1038
Score = 30.3 bits (65), Expect = 2.4
Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = +2
Query: 98 HRVPAPSPMEDPEPGC-GPKPRRGAQRPGE 184
H PSP ED EPGC PK RR +
Sbjct: 816 HSRMTPSPREDNEPGCSAPKRRRSCSHSNQ 845
>X62639-1|CAA44505.1| 385|Drosophila melanogaster hrp48.1 protein.
Length = 385
Score = 29.9 bits (64), Expect = 3.1
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3
Query: 171 NDPGKMFVGGLSWQTSPGTL 230
++ GK+FVGGLSW+T+ L
Sbjct: 4 DERGKLFVGGLSWETTQENL 23
>DQ062784-1|AAY56657.1| 421|Drosophila melanogaster heterogeneous
nuclear ribonucleoproteinprotein.
Length = 421
Score = 29.9 bits (64), Expect = 3.1
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3
Query: 171 NDPGKMFVGGLSWQTSPGTL 230
++ GK+FVGGLSW+T+ L
Sbjct: 4 DERGKLFVGGLSWETTQENL 23
>AY128430-1|AAM75023.1| 421|Drosophila melanogaster GH26816p
protein.
Length = 421
Score = 29.9 bits (64), Expect = 3.1
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3
Query: 171 NDPGKMFVGGLSWQTSPGTL 230
++ GK+FVGGLSW+T+ L
Sbjct: 4 DERGKLFVGGLSWETTQENL 23
>AY069699-1|AAL39844.1| 421|Drosophila melanogaster LD46853p
protein.
Length = 421
Score = 29.9 bits (64), Expect = 3.1
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3
Query: 171 NDPGKMFVGGLSWQTSPGTL 230
++ GK+FVGGLSW+T+ L
Sbjct: 4 DERGKLFVGGLSWETTQENL 23
>AE014297-4290|ABI31212.1| 1704|Drosophila melanogaster CG33553-PH,
isoform H protein.
Length = 1704
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +2
Query: 107 PAPSPMEDPEPGCGPKPRRGAQRPGEDVRRRTQLAD 214
P PSP+ PEP P Q E+ RRR ++ D
Sbjct: 310 PGPSPLVAPEPSLHTNPDPRVQEQIEEDRRRRRMDD 345
>AE014297-4289|AAO41610.1| 2063|Drosophila melanogaster CG33553-PD,
isoform D protein.
Length = 2063
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +2
Query: 107 PAPSPMEDPEPGCGPKPRRGAQRPGEDVRRRTQLAD 214
P PSP+ PEP P Q E+ RRR ++ D
Sbjct: 310 PGPSPLVAPEPSLHTNPDPRVQEQIEEDRRRRRMDD 345
>AE014296-2961|AAF49305.2| 1526|Drosophila melanogaster CG32186-PA
protein.
Length = 1526
Score = 29.9 bits (64), Expect = 3.1
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = -1
Query: 186 SSPGRWAPLRGFGPHPGSGSSMGLGAGTRCEPVGTTTTIERYAAGTAPGXARLHYR 19
+S G A G G G+G+ G G GT T+TT+ T A +H+R
Sbjct: 1448 ASSGDTATKTGTGTGTGTGTGTGTGTGT----ATTSTTVAPTTTSTTTAEATVHHR 1499
>AE014134-1193|AAN10605.1| 421|Drosophila melanogaster CG10377-PC,
isoform C protein.
Length = 421
Score = 29.9 bits (64), Expect = 3.1
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3
Query: 171 NDPGKMFVGGLSWQTSPGTL 230
++ GK+FVGGLSW+T+ L
Sbjct: 4 DERGKLFVGGLSWETTQENL 23
>AE014134-1192|AAF52457.1| 421|Drosophila melanogaster CG10377-PB,
isoform B protein.
Length = 421
Score = 29.9 bits (64), Expect = 3.1
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3
Query: 171 NDPGKMFVGGLSWQTSPGTL 230
++ GK+FVGGLSW+T+ L
Sbjct: 4 DERGKLFVGGLSWETTQENL 23
>AE014134-1191|AAF52456.1| 421|Drosophila melanogaster CG10377-PA,
isoform A protein.
Length = 421
Score = 29.9 bits (64), Expect = 3.1
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3
Query: 171 NDPGKMFVGGLSWQTSPGTL 230
++ GK+FVGGLSW+T+ L
Sbjct: 4 DERGKLFVGGLSWETTQENL 23
>BT022484-1|AAY54900.1| 489|Drosophila melanogaster IP11785p
protein.
Length = 489
Score = 29.5 bits (63), Expect = 4.1
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = -1
Query: 165 PLRGFGPHPGS--GSSMGLGAGTRCEPVGTTTTIERYAAG 52
PL+ H G G S GLGAG R V + I RY +G
Sbjct: 446 PLQHGNAHGGGAGGGSSGLGAGGRTAAVSEKSFINRYESG 485
>BT016106-1|AAV36991.1| 840|Drosophila melanogaster LD20133p
protein.
Length = 840
Score = 29.5 bits (63), Expect = 4.1
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 86 PTGSHRVPAPSPMEDPEPGCGPKPRRGAQRP 178
PTG H + P + +PG GP P + Q P
Sbjct: 222 PTGPHGMLGGPPQQQQQPGQGPVPGQPGQGP 252
>AE014298-2877|AAF48974.1| 348|Drosophila melanogaster CG14218-PA
protein.
Length = 348
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +2
Query: 107 PAPSPMEDPEPGCGPKPRRGAQRPGEDVRRRTQLAD 214
P P P P P P+PR Q+P RR QL D
Sbjct: 176 PPPPPTAPPRPR--PRPRPRPQQPDPQQRRPAQLGD 209
>AE014298-1168|AAF46366.1| 926|Drosophila melanogaster CG10555-PA
protein.
Length = 926
Score = 29.5 bits (63), Expect = 4.1
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 86 PTGSHRVPAPSPMEDPEPGCGPKPRRGAQRP 178
PTG H + P + +PG GP P + Q P
Sbjct: 222 PTGPHGMLGGPPQQQQQPGQGPVPGQPGQGP 252
>AE014134-1157|AAF52432.1| 992|Drosophila melanogaster CG11323-PA
protein.
Length = 992
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -2
Query: 260 PVK*ARPATAERTWTSLPAESSDEHLP 180
PVK ARPAT + T S+P S+ E+ P
Sbjct: 72 PVKLARPATPKETAISVPDHSNKENQP 98
>M63711-1|AAA28542.1| 1043|Drosophila melanogaster FTZ-F1 protein.
Length = 1043
Score = 28.7 bits (61), Expect = 7.2
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = -1
Query: 156 GFGPHPGSGSSMGLGAGTRCEPVGTTT-TIERYAAGTA-PGXARLH 25
G G GSGS G G+G+ +GT T T + TA P + LH
Sbjct: 286 GSGSASGSGSGSGSGSGSIASTIGTATPTTTTSMSNTANPTRSSLH 331
>AE014296-3055|AAF49231.2| 1027|Drosophila melanogaster CG4059-PB,
isoform B protein.
Length = 1027
Score = 28.7 bits (61), Expect = 7.2
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = -1
Query: 156 GFGPHPGSGSSMGLGAGTRCEPVGTTT-TIERYAAGTA-PGXARLH 25
G G GSGS G G+G+ +GT T T + TA P + LH
Sbjct: 284 GSGSASGSGSGSGSGSGSIARTIGTATPTTTTSMSNTANPTRSSLH 329
>AE014296-2923|AAF49329.1| 680|Drosophila melanogaster CG6311-PB
protein.
Length = 680
Score = 28.7 bits (61), Expect = 7.2
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +3
Query: 132 QNQDVARSPAEVPNDPGKMFVGGLSWQTSP-GTLGGGRSRSFHRRKCI 272
+ QD+ +P ND G++ GG S + P G S H+ K I
Sbjct: 130 REQDLPSTPRSRANDNGRVAAGGASSSSGPRGNFNSALSDKMHQLKLI 177
>X62638-1|CAA44504.1| 345|Drosophila melanogaster hrp40.2 protein.
Length = 345
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +3
Query: 171 NDPGKMFVGGLSWQTS 218
+D K+FVGGLSW+T+
Sbjct: 53 DDDRKLFVGGLSWETT 68
>X62637-1|CAA44503.1| 321|Drosophila melanogaster hrp40.1 protein.
Length = 321
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +3
Query: 171 NDPGKMFVGGLSWQTS 218
+D K+FVGGLSW+T+
Sbjct: 53 DDDRKLFVGGLSWETT 68
>S62100-1|AAB26989.1| 308|Drosophila melanogaster SqdB protein.
Length = 308
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +3
Query: 171 NDPGKMFVGGLSWQTS 218
+D K+FVGGLSW+T+
Sbjct: 53 DDDRKLFVGGLSWETT 68
>S61875-1|AAB26988.1| 321|Drosophila melanogaster SqdA protein.
Length = 321
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +3
Query: 171 NDPGKMFVGGLSWQTS 218
+D K+FVGGLSW+T+
Sbjct: 53 DDDRKLFVGGLSWETT 68
>BT023832-1|AAZ86753.1| 308|Drosophila melanogaster LD29474p
protein.
Length = 308
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +3
Query: 171 NDPGKMFVGGLSWQTS 218
+D K+FVGGLSW+T+
Sbjct: 53 DDDRKLFVGGLSWETT 68
>AY118501-1|AAM49870.1| 321|Drosophila melanogaster LD09691p
protein.
Length = 321
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +3
Query: 171 NDPGKMFVGGLSWQTS 218
+D K+FVGGLSW+T+
Sbjct: 53 DDDRKLFVGGLSWETT 68
>AE014297-1708|AAF54964.2| 321|Drosophila melanogaster CG16901-PA,
isoform A protein.
Length = 321
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +3
Query: 171 NDPGKMFVGGLSWQTS 218
+D K+FVGGLSW+T+
Sbjct: 53 DDDRKLFVGGLSWETT 68
>AE014297-1706|AAF54963.2| 344|Drosophila melanogaster CG16901-PB,
isoform B protein.
Length = 344
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +3
Query: 171 NDPGKMFVGGLSWQTS 218
+D K+FVGGLSW+T+
Sbjct: 53 DDDRKLFVGGLSWETT 68
>AE014297-1705|AAN13570.1| 308|Drosophila melanogaster CG16901-PC,
isoform C protein.
Length = 308
Score = 28.3 bits (60), Expect = 9.6
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +3
Query: 171 NDPGKMFVGGLSWQTS 218
+D K+FVGGLSW+T+
Sbjct: 53 DDDRKLFVGGLSWETT 68
>AE014134-980|AAF52296.1| 116|Drosophila melanogaster CG9029-PA
protein.
Length = 116
Score = 28.3 bits (60), Expect = 9.6
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +2
Query: 104 VPAPSPMEDPEPGCGPKP 157
+P PSP+ DP P P P
Sbjct: 30 IPDPSPVADPSPAANPSP 47
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,883,368
Number of Sequences: 53049
Number of extensions: 661172
Number of successful extensions: 3624
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 2705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3445
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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