Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_F17
(651 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.16
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.16
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.16
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.16
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.16
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.16
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 27 0.16
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 27 0.16
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 26 0.36
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 25 0.48
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 25 0.63
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 24 1.5
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 24 1.5
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 24 1.5
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 2.6
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 21 7.8
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 27.1 bits (57), Expect = 0.16
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -2
Query: 260 PVK*ARPATAERTWTSLPAESSDEHLPRVVGHL 162
P+ RPAT E T SLP E L ++ L
Sbjct: 373 PISTGRPATVEDTSASLPLSGMQEELHTILKEL 405
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 27.1 bits (57), Expect = 0.16
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -2
Query: 260 PVK*ARPATAERTWTSLPAESSDEHLPRVVGHL 162
P+ RPAT E T SLP E L ++ L
Sbjct: 373 PISTGRPATVEDTSASLPLSGMQEELHTILKEL 405
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 27.1 bits (57), Expect = 0.16
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -2
Query: 260 PVK*ARPATAERTWTSLPAESSDEHLPRVVGHL 162
P+ RPAT E T SLP E L ++ L
Sbjct: 373 PISTGRPATVEDTSASLPLSGMQEELHTILKEL 405
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 27.1 bits (57), Expect = 0.16
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -2
Query: 260 PVK*ARPATAERTWTSLPAESSDEHLPRVVGHL 162
P+ RPAT E T SLP E L ++ L
Sbjct: 373 PISTGRPATVEDTSASLPLSGMQEELHTILKEL 405
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 27.1 bits (57), Expect = 0.16
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -2
Query: 260 PVK*ARPATAERTWTSLPAESSDEHLPRVVGHL 162
P+ RPAT E T SLP E L ++ L
Sbjct: 373 PISTGRPATVEDTSASLPLSGMQEELHTILKEL 405
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 27.1 bits (57), Expect = 0.16
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -2
Query: 260 PVK*ARPATAERTWTSLPAESSDEHLPRVVGHL 162
P+ RPAT E T SLP E L ++ L
Sbjct: 373 PISTGRPATVEDTSASLPLSGMQEELHTILKEL 405
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 27.1 bits (57), Expect = 0.16
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -2
Query: 260 PVK*ARPATAERTWTSLPAESSDEHLPRVVGHL 162
P+ RPAT E T SLP E L ++ L
Sbjct: 441 PISTGRPATVEDTSASLPLSGMQEELHTILKEL 473
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 27.1 bits (57), Expect = 0.16
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -2
Query: 260 PVK*ARPATAERTWTSLPAESSDEHLPRVVGHL 162
P+ RPAT E T SLP E L ++ L
Sbjct: 441 PISTGRPATVEDTSASLPLSGMQEELHTILKEL 473
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 25.8 bits (54), Expect = 0.36
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 466 FYRSILMKVTFFNVGKLKYILNLR*KPIFYGYN 564
FY SI+ +T N + Y NL I+Y YN
Sbjct: 26 FYGSIMFSMTQVNKEECDYYQNLNLGEIYYIYN 58
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 25.4 bits (53), Expect = 0.48
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +2
Query: 41 PGAVPAAYRSIVVVVPTGSHRVPAPSPMEDPEPGCGPKPRRGAQRPGE 184
PG P+ ++S P R P+P + P PG GP +Q P +
Sbjct: 21 PGPQPSPHQS-----PQAPQRGSPPNPSQGPPPG-GPPGAPPSQNPSQ 62
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 25.0 bits (52), Expect = 0.63
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -1
Query: 132 GSSMGLGAGTRCEPVGT 82
G ++G AG C+PVGT
Sbjct: 281 GVAIGTAAGMMCQPVGT 297
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 23.8 bits (49), Expect = 1.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 471 VERYPIPLTKFRQRLQVIS*LAKLLPVFTN 382
VE YP + K+ QRL+ I K P F +
Sbjct: 447 VEGYPHAVPKYIQRLKAIRATLKASPFFAS 476
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 23.8 bits (49), Expect = 1.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 471 VERYPIPLTKFRQRLQVIS*LAKLLPVFTN 382
VE YP + K+ QRL+ I K P F +
Sbjct: 362 VEGYPHAVPKYIQRLKAIRATLKASPFFAS 391
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 23.8 bits (49), Expect = 1.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 471 VERYPIPLTKFRQRLQVIS*LAKLLPVFTN 382
VE YP + K+ QRL+ I K P F +
Sbjct: 681 VEGYPHAVPKYIQRLKAIRATLKASPFFAS 710
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.0 bits (47), Expect = 2.6
Identities = 17/59 (28%), Positives = 24/59 (40%)
Frame = -1
Query: 195 RRTSSPGRWAPLRGFGPHPGSGSSMGLGAGTRCEPVGTTTTIERYAAGTAPGXARLHYR 19
R P + + F PHPG+G S GT PVG T ++ + R + R
Sbjct: 1734 REEMDPSKAMQFQTF-PHPGNGHS-----GTMGPPVGHPTNASAHSRSGSQSMPRQNGR 1786
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.4 bits (43), Expect = 7.8
Identities = 8/20 (40%), Positives = 10/20 (50%)
Frame = +3
Query: 525 FEFAVKTDILWI*YRSQMCE 584
F+ K DI W + Q CE
Sbjct: 144 FKSTCKIDITWFPFDDQRCE 163
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,942
Number of Sequences: 438
Number of extensions: 4192
Number of successful extensions: 20
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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