Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_F13
(593 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17; Eukaryo... 292 5e-78
UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86; Eukaryo... 240 2e-62
UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55; Eukaryo... 221 8e-57
UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40; Eukar... 194 1e-48
UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1; Dictyost... 193 2e-48
UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6; Eukary... 193 2e-48
UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lambl... 173 3e-42
UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2; E... 166 3e-40
UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonch... 158 1e-37
UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1; ... 157 1e-37
UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, wh... 155 7e-37
UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillard... 154 1e-36
UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3; Archaea... 131 1e-29
UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14; Euryar... 130 3e-29
UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1; Encephal... 123 3e-27
UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S riboso... 121 1e-26
UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2; Tr... 118 8e-26
UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S riboso... 114 1e-24
UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2; Methano... 112 5e-24
UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4; Methano... 112 7e-24
UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2; Thermoprotei... 109 4e-23
UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella... 109 6e-23
UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8; Thermop... 106 3e-22
UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus N... 103 2e-21
UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1; Nanoarc... 103 4e-21
UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4; Euryarc... 101 1e-20
UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2; environ... 100 2e-20
UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1; Cenarch... 100 3e-20
UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5; Halobac... 95 1e-18
UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellula... 91 2e-17
UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5; Thermop... 90 4e-17
UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1; Thermop... 88 2e-16
UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A, S... 80 4e-14
UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3; Thermop... 79 8e-14
UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1; ... 65 1e-09
UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S riboso... 56 5e-07
UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal ... 55 1e-06
UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6; Proteoba... 52 1e-05
UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108; Proteo... 51 2e-05
UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3; Thermoto... 50 3e-05
UniRef50_Q661C7 Cluster: 50S ribosomal protein L6; n=9; cellular... 48 2e-04
UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40; Bacteri... 47 3e-04
UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7; Bacilli|... 47 3e-04
UniRef50_Q8R7W9 Cluster: 50S ribosomal protein L6; n=22; Bacteri... 47 4e-04
UniRef50_Q847P4 Cluster: 50S ribosomal protein L6; n=1; Aster ye... 46 7e-04
UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132, w... 44 0.002
UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular... 43 0.005
UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 42 0.011
UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34; Bacteri... 42 0.014
UniRef50_Q2JIL3 Cluster: 50S ribosomal protein L6; n=44; cellula... 40 0.033
UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16; Firmicu... 40 0.044
UniRef50_Q6KI40 Cluster: 50S ribosomal protein l6; n=4; Mycoplas... 38 0.13
UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6; Bacteria... 38 0.13
UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 38 0.18
UniRef50_Q9ZCS0 Cluster: 50S ribosomal protein L6; n=10; Rickett... 38 0.23
UniRef50_Q9A8T8 Cluster: 50S ribosomal protein L6; n=16; Bacteri... 37 0.31
UniRef50_Q9RSL3 Cluster: 50S ribosomal protein L6; n=65; cellula... 37 0.41
UniRef50_Q6E783 Cluster: Ribosomal protein L6; n=5; Oomycetes|Re... 36 0.54
UniRef50_O23049 Cluster: 50S ribosomal protein L6, chloroplast p... 36 0.54
UniRef50_Q7VQD3 Cluster: 50S ribosomal subunit protein L6; n=2; ... 36 0.72
UniRef50_Q8KAI6 Cluster: 50S ribosomal protein L6; n=15; Bacteri... 36 0.72
UniRef50_Q98PZ7 Cluster: 50S ribosomal protein L6; n=29; Bacteri... 36 0.95
UniRef50_A0YJS9 Cluster: 50S ribosomal protein L6; n=2; cellular... 35 1.3
UniRef50_Q4QI55 Cluster: Putative uncharacterized protein; n=3; ... 35 1.3
UniRef50_Q9ZI38 Cluster: 50S ribosomal protein L6; n=2; Aquifex ... 35 1.3
UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3; Planctom... 35 1.7
UniRef50_O67565 Cluster: 50S ribosomal protein L6; n=1; Aquifex ... 35 1.7
UniRef50_Q8XPL8 Cluster: Putative surface-exposed adhesin protei... 33 3.8
UniRef50_Q8DML8 Cluster: 50S ribosomal protein L6; n=4; cellular... 33 3.8
UniRef50_Q11HR7 Cluster: 50S ribosomal protein L6; n=73; Proteob... 33 3.8
UniRef50_Q5FM76 Cluster: 50S ribosomal protein L6; n=10; Firmicu... 33 3.8
UniRef50_A6EPW1 Cluster: Putative uncharacterized protein; n=1; ... 33 5.0
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 33 5.0
UniRef50_UPI000049A156 Cluster: ankyrin; n=9; Entamoeba histolyt... 33 6.7
UniRef50_Q6Q8X3 Cluster: 50S ribosomal protein L6; n=6; Proteoba... 33 6.7
UniRef50_Q4UCX9 Cluster: Glutamate-cysteine ligase, putative; n=... 33 6.7
UniRef50_Q1XDI8 Cluster: Chloroplast 50S ribosomal protein L6; n... 33 6.7
UniRef50_Q1ZBZ7 Cluster: 50S ribosomal protein L6; n=1; Psychrom... 32 8.8
UniRef50_Q112B1 Cluster: Taurine catabolism dioxygenase TauD/Tfd... 32 8.8
>UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17;
Eukaryota|Rep: 60S ribosomal protein L9 - Drosophila
melanogaster (Fruit fly)
Length = 190
Score = 292 bits (716), Expect = 5e-78
Identities = 141/181 (77%), Positives = 156/181 (86%)
Frame = +3
Query: 48 ANQKVKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKEL 227
+NQ VKIP + VK R+VT G RG LKR+FKHLA+D+ M + R LKVEKWFG+KKEL
Sbjct: 6 SNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFGTKKEL 65
Query: 228 AAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXXVK 407
AAVRTVCSH+ENMIKGVT GFQYKMRAVYAHFPINCVT+E N++IEIRNFLGEKYI V+
Sbjct: 66 AAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKYIRRVE 125
Query: 408 MAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSXKTTV 587
MAPGVTVVNS QKDELI+EGN +E VS SAALIQQSTTVKNKDIRKFLDGLYVS KTTV
Sbjct: 126 MAPGVTVVNSTAQKDELIVEGNDIESVSGSAALIQQSTTVKNKDIRKFLDGLYVSEKTTV 185
Query: 588 V 590
V
Sbjct: 186 V 186
>UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86;
Eukaryota|Rep: 60S ribosomal protein L9 - Homo sapiens
(Human)
Length = 192
Score = 240 bits (588), Expect = 2e-62
Identities = 114/183 (62%), Positives = 145/183 (79%), Gaps = 2/183 (1%)
Frame = +3
Query: 45 VANQKVKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRMVNPRL--LKVEKWFGSK 218
++NQ V IP+ + + +K R V KGPRG L+R+F H+ V++ ++ + L+V+KW+G++
Sbjct: 5 LSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLGKKKKRLRVDKWWGNR 64
Query: 219 KELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIX 398
KELA VRT+CSHV+NMIKGVT GF+YKMR+VYAHFPIN V E S++EIRNFLGEKYI
Sbjct: 65 KELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQENGSLVEIRNFLGEKYIR 124
Query: 399 XVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSXK 578
V+M PGV S QKDELI+EGN +E VS+SAALIQQ+TTVKNKDIRKFLDG+YVS K
Sbjct: 125 RVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVKNKDIRKFLDGIYVSEK 184
Query: 579 TTV 587
TV
Sbjct: 185 GTV 187
>UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55;
Eukaryota|Rep: 60S ribosomal protein L9 - Oryza sativa
subsp. japonica (Rice)
Length = 190
Score = 221 bits (541), Expect = 8e-57
Identities = 104/182 (57%), Positives = 139/182 (76%), Gaps = 1/182 (0%)
Frame = +3
Query: 45 VANQKVKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRMVNP-RLLKVEKWFGSKK 221
+A++ ++IP+G+TV V ++VT +GPRG L RNFKHL +D +++ R L+V+ WFG+++
Sbjct: 5 LASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLLEGGRKLQVDAWFGTRR 64
Query: 222 ELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXX 401
+AA+RT SHV+N+I GVTKG++YKMR VYAHFPIN T N+ IEIRNFLGEK +
Sbjct: 65 TMAAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNFLGEKKVRK 124
Query: 402 VKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSXKT 581
V M GVT++ S K KDEL+++GN +E VS SAALI Q VKNKDIRKFLDG+YVS K
Sbjct: 125 VDMLEGVTILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSDKG 184
Query: 582 TV 587
T+
Sbjct: 185 TI 186
>UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 191
Score = 194 bits (474), Expect = 1e-48
Identities = 96/177 (54%), Positives = 127/177 (71%), Gaps = 2/177 (1%)
Frame = +3
Query: 54 QKVKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 233
Q++++P+G+TV +K R+V GPRG L +N KH+ V VN +L+KV G +K +AA
Sbjct: 8 QQIEVPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTFTKVNNQLIKVAVHNGGRKHVAA 67
Query: 234 VRTVCSHVENMIKGVTKGFQYKMRAVYAHFPI--NCVTTEGNSIIEIRNFLGEKYIXXVK 407
+RTV S V+NMI GVTKG++YKMR VYAHFPI N V +G IE+RNFLG+K I V
Sbjct: 68 LRTVKSLVDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIEVRNFLGDKKIRNVP 127
Query: 408 MAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSXK 578
+ GVT+ S KDE+++ GNS+EDVS +AA +QQ V+NKDIRKFLDG+YVS K
Sbjct: 128 VRDGVTIEFSTNVKDEIVLSGNSVEDVSQNAADLQQICRVRNKDIRKFLDGIYVSHK 184
>UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L9 - Dictyostelium discoideum AX4
Length = 206
Score = 193 bits (471), Expect = 2e-48
Identities = 85/170 (50%), Positives = 121/170 (71%)
Frame = +3
Query: 78 LTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHV 257
+TV VK R V GPRG L ++F H +VDI +V + L V+ WFG++K++A ++T+ S +
Sbjct: 34 VTVDVKGRSVKVTGPRGTLSKSFDHASVDINLVGKKELTVDLWFGNRKQIACIKTITSII 93
Query: 258 ENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXXVKMAPGVTVVNS 437
ENMI GVTKG++YKMR VYAHFPIN T+G ++EIRNF GEK + +++ G+T +
Sbjct: 94 ENMITGVTKGYEYKMRFVYAHFPINVAVTDGGRVVEIRNFFGEKIVRRIELLDGITCYRN 153
Query: 438 PKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSXKTTV 587
K KDE+++ GNSLE +S S A IQ + +K KD+RKFLDG+YVS + +
Sbjct: 154 EKAKDEIVLTGNSLELLSQSCATIQLRSAIKYKDVRKFLDGIYVSERNVL 203
>UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 190
Score = 193 bits (471), Expect = 2e-48
Identities = 94/179 (52%), Positives = 126/179 (70%)
Frame = +3
Query: 51 NQKVKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELA 230
++ + IP G+TV +K R VT GPRG LK+N +H+ ++++ +K W GS+K A
Sbjct: 8 DETLTIPKGVTVDIKARNVTVTGPRGTLKQNLRHVDIEMKKQG-NTIKFIVWHGSRKHNA 66
Query: 231 AVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXXVKM 410
+R+V S + NMI GVT+GF+YKMR VYAHFPIN TE +++EIRNFLGE+ +K
Sbjct: 67 CIRSVYSIINNMIIGVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLGERITRVIKC 126
Query: 411 APGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSXKTTV 587
PGVTV S KDE+I+EGNSLE+VS SAA I+Q V+NKDIRKFLDG+YVS + +
Sbjct: 127 LPGVTVSISSAVKDEIILEGNSLENVSQSAANIKQICNVRNKDIRKFLDGIYVSERGNI 185
>UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_108_35846_36403 - Giardia lamblia
ATCC 50803
Length = 185
Score = 173 bits (420), Expect = 3e-42
Identities = 84/177 (47%), Positives = 110/177 (62%)
Frame = +3
Query: 48 ANQKVKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKEL 227
++ +K+P + + R+VT KG +G L R+F H +DI N + V WF K
Sbjct: 5 SSMTIKVPTDVECTINKRVVTVKGKKGTLVRDFSHAPLDITHANDTI-SVAVWFPRGKRN 63
Query: 228 AAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXXVK 407
A RT+CSH+ENM KGVT GF+YKMR YAHFPI + N IEIRNF+ + ++
Sbjct: 64 ALPRTICSHIENMFKGVTYGFEYKMRLAYAHFPIAATVVDNNKAIEIRNFMHQIKTRRIE 123
Query: 408 MAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSXK 578
PGVT+ S KDELI+ G S+EDVS +AA I +S V NKD+RKFLDG YVS +
Sbjct: 124 CLPGVTIAMSTNVKDELILRGISIEDVSHTAARIHESLKVPNKDLRKFLDGCYVSSR 180
>UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L9 - Entamoeba histolytica HM-1:IMSS
Length = 197
Score = 166 bits (404), Expect = 3e-40
Identities = 82/187 (43%), Positives = 120/187 (64%), Gaps = 9/187 (4%)
Frame = +3
Query: 54 QKVKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDI-------RMVNPR--LLKVEKW 206
+ V IP+G+ + + + + GPRG L R F+H VDI + P+ ++ ++ W
Sbjct: 9 EHVVIPEGVNIEINRKNIKVTGPRGSLTREFQHPKVDIYASKLVVKKEGPKENVVVIDMW 68
Query: 207 FGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGE 386
+G++++ A VRT+ SH++NMI GVTKG+QYKMR VYAHFP+ V + I+++NFLGE
Sbjct: 69 YGNRRDSAVVRTIASHIKNMITGVTKGYQYKMRVVYAHFPVTLVIADDGKSIQVQNFLGE 128
Query: 387 KYIXXVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLY 566
K ++M GV V KDE+ +EGN +E VS SAA I + V+NKDIR+FLDG+Y
Sbjct: 129 KRTRHIEMYDGVVV--KKLGKDEICLEGNDVEKVSQSAANIHAANLVRNKDIRQFLDGVY 186
Query: 567 VSXKTTV 587
VS K +
Sbjct: 187 VSEKCLI 193
>UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonchus
contortus|Rep: 60S ribosomal protein L9 - Haemonchus
contortus (Barber pole worm)
Length = 141
Score = 158 bits (383), Expect = 1e-37
Identities = 70/121 (57%), Positives = 90/121 (74%)
Frame = +3
Query: 48 ANQKVKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKEL 227
+N V PDG+T VK R+V GPRG LKR+F+HL +++ V L+V KWFG +KE+
Sbjct: 6 SNDTVDFPDGVTFTVKNRVVHVTGPRGTLKRDFRHLHMEMERVGKNQLRVRKWFGVRKEI 65
Query: 228 AAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXXVK 407
AA+RTVCSH++NMIKGVTKGF+YKMR+VYAHFPIN +G +EIRNFLGEK + V
Sbjct: 66 AAIRTVCSHIQNMIKGVTKGFRYKMRSVYAHFPINVTLQDGGRTVEIRNFLGEKIVRPVP 125
Query: 408 M 410
+
Sbjct: 126 L 126
>UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 252
Score = 157 bits (382), Expect = 1e-37
Identities = 77/157 (49%), Positives = 104/157 (66%), Gaps = 3/157 (1%)
Frame = +3
Query: 129 VLKRNFKHLAVDIRMVNP---RLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYK 299
V +++ KH+ +D R++ + +K W +K A +RT + V NMIKGVT GFQYK
Sbjct: 92 VSQQSLKHMNLDARIIKSPAGQKIKFVVWHAGRKHAACLRTAQACVANMIKGVTVGFQYK 151
Query: 300 MRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXXVKMAPGVTVVNSPKQKDELIIEGNSL 479
MRAVYAHFPIN + EIRNFLGEK + + M GVT+ QKD++++EGN +
Sbjct: 152 MRAVYAHFPINIIIAGDKKSAEIRNFLGEKRVRNIAMLEGVTIQEDKAQKDQVLVEGNDI 211
Query: 480 EDVSSSAALIQQSTTVKNKDIRKFLDGLYVSXKTTVV 590
+ VS SAAL+ +T V+NKDIRKFLDG+Y + K TVV
Sbjct: 212 DLVSQSAALLHGATLVRNKDIRKFLDGIYCTGKDTVV 248
>UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=6; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_51, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 196
Score = 155 bits (376), Expect = 7e-37
Identities = 81/188 (43%), Positives = 117/188 (62%), Gaps = 10/188 (5%)
Frame = +3
Query: 45 VANQKVKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRM---VNPR------LLKV 197
+ + V IP+ + + K ++V KGPRG L +NF+H A+DI++ VN + + V
Sbjct: 5 LTEEHVPIPEKIEITQKSKVVKVKGPRGELTKNFRHSALDIQVQKKVNKKNNVAKSRVSV 64
Query: 198 EKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNF 377
W +K+ V +V S + NMI+GVT G+++KM YAHFPI +EI+NF
Sbjct: 65 RMWQSYRKQRCQVNSVASQIRNMIRGVTTGYKFKMVLAYAHFPIIINLIGNGQGVEIKNF 124
Query: 378 LGEKYIXXVKMAPGVTVV-NSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFL 554
LGEK I +K PGVT+ N ++K+ L ++GN L +VS + ALI Q+ VKNKDIR+FL
Sbjct: 125 LGEKIIRTIKCLPGVTITRNEAEEKNVLTLQGNDLNNVSLTCALIHQACAVKNKDIRQFL 184
Query: 555 DGLYVSXK 578
DG+YVS K
Sbjct: 185 DGIYVSEK 192
>UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillardia
theta|Rep: 60S ribosomal protein L9 - Guillardia theta
(Cryptomonas phi)
Length = 188
Score = 154 bits (374), Expect = 1e-36
Identities = 75/176 (42%), Positives = 110/176 (62%), Gaps = 1/176 (0%)
Frame = +3
Query: 54 QKVKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRMVNPRL-LKVEKWFGSKKELA 230
+K+KIP + + K R ++ G G + R+F+ + IR + + + W KK+LA
Sbjct: 8 RKIKIPKNVKIKTKARKISATGSLGSIIRSFEKTQISIRYFEKKKEIILLLWMAGKKQLA 67
Query: 231 AVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXXVKM 410
+ T+ SH+ NMI GV+ GF+Y ++ +YAHFPIN T+ S +EIRNFLGEK I + M
Sbjct: 68 KLNTIASHITNMIVGVSLGFEYILQPIYAHFPINLSITDDGSCLEIRNFLGEKRIRKIYM 127
Query: 411 APGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSXK 578
GV + + +KDE+ + G+ L VS +AA IQQS KNKD+RKFLDG+Y+ K
Sbjct: 128 GQGVKIKKNEAKKDEISVFGSDLNLVSLNAASIQQSCQAKNKDLRKFLDGIYIIMK 183
>UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3;
Archaea|Rep: 50S ribosomal protein L6P - Pyrococcus
kodakaraensis (Thermococcus kodakaraensis)
Length = 184
Score = 131 bits (317), Expect = 1e-29
Identities = 71/175 (40%), Positives = 111/175 (63%)
Frame = +3
Query: 54 QKVKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 233
++++IP+G+ V V+ V KGP+G L+R K+ V I + +++ + K F KK++A
Sbjct: 9 EEIEIPEGVEVTVEGNTVKVKGPKGELQRELKYPGVQIFTEDGKVV-IYKEFPRKKDVAI 67
Query: 234 VRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXXVKMA 413
VRT +H+ NMIKGVT+GF+Y+++ VY+HFP+ V +G+ ++ I NFLGEK K+
Sbjct: 68 VRTFKAHINNMIKGVTEGFKYRLKVVYSHFPMT-VKVQGDEVV-IENFLGEKNPRRAKIL 125
Query: 414 PGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSXK 578
PGVTV + E+ +EG E V +AA I+Q+T + D R F DG+Y+ K
Sbjct: 126 PGVTV---KVKGSEIEVEGIDKEAVGQTAANIEQATRITKWDRRVFQDGIYIVEK 177
>UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Pyrococcus furiosus
Length = 184
Score = 130 bits (313), Expect = 3e-29
Identities = 73/175 (41%), Positives = 109/175 (62%)
Frame = +3
Query: 54 QKVKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 233
++V+IP+G+ V V+ V KGP+G L+R F + I + ++ + K F +K++A
Sbjct: 9 EEVEIPEGVEVTVEGYKVKVKGPKGELEREFFWPGIQIFTEDGNVV-IYKDFPRRKDVAI 67
Query: 234 VRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXXVKMA 413
RT +H+ NMIKGVT+GF YK++ VY+HFPI+ V +G+ +I I NFLGEK K+
Sbjct: 68 ARTFAAHIRNMIKGVTEGFTYKLKVVYSHFPIS-VKVQGDEVI-IENFLGEKAPRKAKIL 125
Query: 414 PGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSXK 578
PGVTV + E+I+EG E V +AA I+Q+T + D R F DG+Y+ K
Sbjct: 126 PGVTV---KVRGQEIIVEGIDKEAVGQTAANIEQATRITKWDRRIFQDGIYIVEK 177
>UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L9 -
Encephalitozoon cuniculi
Length = 204
Score = 123 bits (297), Expect = 3e-27
Identities = 69/182 (37%), Positives = 104/182 (57%), Gaps = 2/182 (1%)
Frame = +3
Query: 39 KFVANQKVKIPDGLTVHVKXRLVTDKGPRG-VLKRNFKH-LAVDIRMVNPRLLKVEKWFG 212
+ + + VK+P+ T + ++ T +GP+G +++ +H L DI N +++ W G
Sbjct: 23 RILVTRIVKVPEDCTATQEGKIFTFQGPKGSIVEDCTRHPLTFDIHEGN---IRIRLWNG 79
Query: 213 SKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKY 392
+K +A TV S + N IK VT GF Y M+AVY HF IN E I+ ++NFLGEK
Sbjct: 80 KRKAMALAITVESLLRNAIKAVTVGFAYTMKAVYNHFSINMEIKEDGKILLVKNFLGEKN 139
Query: 393 IXXVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVS 572
+ +M G V ++KD ++IEG SL DVS SA I KN+D R FLDG++V+
Sbjct: 140 VKRFRMR-GAARVRLDERKDTIVIEGPSLSDVSQSAGTITNECKAKNRDSRVFLDGIFVT 198
Query: 573 XK 578
+
Sbjct: 199 ER 200
>UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=3; Euarchontoglires|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 145
Score = 121 bits (292), Expect = 1e-26
Identities = 67/123 (54%), Positives = 84/123 (68%)
Frame = +3
Query: 219 KELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIX 398
KELA VRT+CSHV+NMIKGV+ GF+YK+R+VYAHFP+N V
Sbjct: 30 KELATVRTICSHVQNMIKGVSLGFRYKVRSVYAHFPLNVV-------------------- 69
Query: 399 XVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSXK 578
+M GV S QKDELI+EGN E VS+SAALIQ++T V+N+DIRKF+DG+YVS K
Sbjct: 70 --QMRTGVACSVSQAQKDELILEGNDTELVSNSAALIQKATAVENQDIRKFVDGIYVSEK 127
Query: 579 TTV 587
T+
Sbjct: 128 GTM 130
>UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 197
Score = 118 bits (285), Expect = 8e-26
Identities = 70/177 (39%), Positives = 97/177 (54%), Gaps = 8/177 (4%)
Frame = +3
Query: 63 KIPDGLTVHVKXRLVT--DKGPR----GVLKRNFKHLAVDIRM-VNPRLLKVEKWFGSKK 221
KIP+ + VK +VT + P+ L ++ HL +D N + WFG++K
Sbjct: 12 KIPENIKCTVKSGVVTIEHQDPKDKKTSKLVKDLSHLKLDFEYDENDHQIVARCWFGNRK 71
Query: 222 ELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXX 401
LA + T+ V+NMI GVT G++YKM VY+HFPI +E + F+G K
Sbjct: 72 LLARIGTLFGIVKNMITGVTLGWRYKMHFVYSHFPIKHTCSEDGRTFDFNGFMGHKEHKI 131
Query: 402 VKMAPGVTV-VNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYV 569
V GV + N KDE+ IEG +LEDVS I Q T +K+KD+RKFLDG+YV
Sbjct: 132 VTAPEGVRIWSNESVAKDEINIEGANLEDVSLVCGQIHQLTKIKDKDLRKFLDGIYV 188
>UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S ribosomal
protein L9, partial; n=1; Macaca mulatta|Rep: PREDICTED:
similar to 60S ribosomal protein L9, partial - Macaca
mulatta
Length = 179
Score = 114 bits (275), Expect = 1e-24
Identities = 59/111 (53%), Positives = 74/111 (66%), Gaps = 4/111 (3%)
Frame = +3
Query: 60 VKIP-DGLTVHV--KXRLVTDKGPRGVLKRNFKHLAVDIRMVNP-RLLKVEKWFGSKKEL 227
++IP DG TV V K R + G G L+R F+H+ VD+++V R + VE WFG K
Sbjct: 69 IQIPEDGSTVKVTLKSRHIVVSGKYGKLERTFRHIPVDMKLVEDGRKITVEMWFGLTKNK 128
Query: 228 AAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFL 380
A +RTVCSH+ENMI GV + +QYK+R VYAHFPIN T S IEIRNFL
Sbjct: 129 ACIRTVCSHIENMITGVRQRYQYKLRFVYAHFPINSNITNDGSTIEIRNFL 179
>UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2;
Methanomicrobiales|Rep: 50S ribosomal protein L6P -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 174
Score = 112 bits (270), Expect = 5e-24
Identities = 65/175 (37%), Positives = 103/175 (58%)
Frame = +3
Query: 54 QKVKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAA 233
++V+IP G+ V + ++T GP+G L R+ + +D+ MV + V K+ LA
Sbjct: 5 RQVEIPPGVDVTLDGGVLTVSGPKGTLVRDMRFPQIDL-MVEGGEVVVSTASEKKRILAM 63
Query: 234 VRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXXVKMA 413
T+ +H +NMI+GV G++Y+M+ VY+HFPI + +GN +EI NFLGEK K+
Sbjct: 64 TGTLEAHAKNMIRGVADGYEYRMKVVYSHFPIQ-LKQQGNR-LEITNFLGEKQPRIAKII 121
Query: 414 PGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSXK 578
GVTV DE+ I G E V ++AA I+ +T + +D R F DG+Y++ +
Sbjct: 122 EGVTVKIG---NDEVTITGIDKEKVGNTAANIEHATRITKRDPRVFQDGIYITER 173
>UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4;
Methanomicrobia|Rep: 50S ribosomal protein L6P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 176
Score = 112 bits (269), Expect = 7e-24
Identities = 65/173 (37%), Positives = 104/173 (60%)
Frame = +3
Query: 60 VKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 239
++IP+G++V + + T KGP+G ++R F + + I + ++ V+ K++ A V
Sbjct: 9 IEIPEGVSVSLSQDVFTAKGPKGTVERTFWYPGIKIEVREGEVV-VDAESSRKEQKAMVG 67
Query: 240 TVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXXVKMAPG 419
T SH++N+I GV++GF+ KM VYAHFP+ V EG +++ I NFLGEK K+ G
Sbjct: 68 TFASHLKNLIIGVSEGFECKMNIVYAHFPMQ-VKVEGKTLV-IGNFLGEKKPRIAKIL-G 124
Query: 420 VTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSXK 578
T V +E+++ G + EDV +AA I+Q T +K D R F DG+Y+ K
Sbjct: 125 ETKVK--VSGNEIVVSGINKEDVGQTAANIEQKTKIKRFDPRIFQDGIYIVQK 175
>UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2;
Thermoprotei|Rep: Ribosomal protein L6 - Thermofilum
pendens (strain Hrk 5)
Length = 191
Score = 109 bits (263), Expect = 4e-23
Identities = 64/162 (39%), Positives = 100/162 (61%), Gaps = 1/162 (0%)
Frame = +3
Query: 54 QKVKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLA-VDIRMVNPRLLKVEKWFGSKKELA 230
+ V IP+G+ VHV + V +GP G ++++F H + IR V + VE + +KK+ A
Sbjct: 8 ESVPIPEGVKVHVNGKRVEVEGPLGKVEKDFSHARRISIR-VEGNSVVVETFHATKKDYA 66
Query: 231 AVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXXVKM 410
V T+ S + NMI GVTKG++YK++ VYAHFP++ + E + II I NFLGE+ +
Sbjct: 67 LVGTIASIINNMIIGVTKGYRYKLKIVYAHFPMS-LKVEKDKII-IENFLGERGKRIAGI 124
Query: 411 APGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNK 536
PG V +KD++I+EG L+ V+ +AA I +T ++ K
Sbjct: 125 MPGAKV---KIEKDDVIVEGIDLDAVAQTAANIHLATHLRGK 163
>UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella
natans|Rep: Ribosomal protein L9 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 190
Score = 109 bits (261), Expect = 6e-23
Identities = 56/175 (32%), Positives = 95/175 (54%), Gaps = 2/175 (1%)
Frame = +3
Query: 60 VKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDI--RMVNPRLLKVEKWFGSKKELAA 233
+ +P + + +K + + KG G L + F + V+I + + L V ++ +K A
Sbjct: 10 INVPKDVKIRIKEKTIYTKGINGELSKKFNNKNVNIIYKKNDSNSLIVRCYYNNKSSSAI 69
Query: 234 VRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXXVKMA 413
VRT+ S + NMI GV+KGF Y ++ VY+HFPI+ + + +EI N G K I +
Sbjct: 70 VRTITSIIYNMIIGVSKGFTYLLKIVYSHFPISVKYIQNENTLEITNLFGLKRIDSFFIP 129
Query: 414 PGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSXK 578
V V + K E+I+ +E + ++LIQ ++ NKD R F+DG+Y++ K
Sbjct: 130 SSVQVCTNNLNKKEIILLSKDIETLGILSSLIQNKCSINNKDCRVFIDGIYLASK 184
>UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8;
Thermoprotei|Rep: 50S ribosomal protein L6P - Sulfolobus
acidocaldarius
Length = 189
Score = 106 bits (255), Expect = 3e-22
Identities = 55/181 (30%), Positives = 110/181 (60%), Gaps = 1/181 (0%)
Frame = +3
Query: 54 QKVKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRM-VNPRLLKVEKWFGSKKELA 230
++++IPD + V ++ ++ KGP+G + ++F + A IR+ +N + +E F +++ A
Sbjct: 11 EEIQIPDKVKVSLENNVLKVKGPKGEVIKDFSY-AKGIRIQLNEGKIILETTFADRRKKA 69
Query: 231 AVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXXVKM 410
+ ++ +H++NMI G G++Y ++ + HFPI+ V G+ +++ N +GEK I K+
Sbjct: 70 LLYSIIAHIKNMITGTINGYRYYLKVISTHFPIS-VKVSGDE-VQVSNLIGEKNIRRAKI 127
Query: 411 APGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSXKTTVV 590
PGV V + +++++EG+ + +V+ +AA I+ ST + D R F DG+Y+ K +
Sbjct: 128 LPGVKVT---VKGEDIVVEGSDIYNVAQTAANIESSTKIVGYDRRIFSDGIYIYKKEVIG 184
Query: 591 L 593
L
Sbjct: 185 L 185
>UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L6
- Candidatus Nitrosopumilus maritimus SCM1
Length = 185
Score = 103 bits (248), Expect = 2e-21
Identities = 60/174 (34%), Positives = 102/174 (58%)
Frame = +3
Query: 57 KVKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 236
+V+IP+G+TV ++ +GP G +NF+++ V I + + ++ ++ K++ A +
Sbjct: 12 QVEIPEGVTVTQNKNMLLFEGPLGKTHKNFRNIPVKIEIADGKV-NLKTIGERKRDYAIL 70
Query: 237 RTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXXVKMAP 416
T S + N+ +G+ +G+ KM+ V+AHFPI V EG I+ I NF GE+ +
Sbjct: 71 HTARSIIRNICEGLVEGYTIKMKVVFAHFPIT-VKVEGKKIL-IENFQGERAPRSTHIMG 128
Query: 417 GVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSXK 578
V+ PK +D +++ G D++ +AA I+ +T VKNKD R FLDG+YV K
Sbjct: 129 NTKVI--PKGED-VLLTGEVWTDITQTAANIELTTKVKNKDHRVFLDGIYVYEK 179
>UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L6P -
Nanoarchaeum equitans
Length = 192
Score = 103 bits (246), Expect = 4e-21
Identities = 58/183 (31%), Positives = 101/183 (55%), Gaps = 5/183 (2%)
Frame = +3
Query: 45 VANQKVKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 224
+ ++ IP+ + V + ++ GP+G ++R F H + + VN + +E +F +++E
Sbjct: 5 IIKYEIPIPENVKVSYENNILKVSGPKGEVERKFYHPLIKLS-VNDNKIILETYFATRRE 63
Query: 225 LAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK--YIX 398
+ T SH++NM++GV F Y+++ Y HFP+ V EGN +I + NFLGEK I
Sbjct: 64 KRLINTWRSHIKNMLEGVQNPFVYRLKVCYTHFPMR-VKLEGNKLI-VENFLGEKAPIIK 121
Query: 399 XVKMAPGVTV-VNSPKQKDELIIEGNSLEDVSSSAALIQQSTTV--KNKDIRKFLDGLYV 569
+ V V + K + E+++E E A++I+QST K KD R+F DG+++
Sbjct: 122 ELPYLDKVKVKIEQNKDETEIVVESPDKEKAGIVASMIEQSTRFLHKRKDRRRFTDGIWL 181
Query: 570 SXK 578
K
Sbjct: 182 YYK 184
>UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Archaeoglobus fulgidus
Length = 196
Score = 101 bits (242), Expect = 1e-20
Identities = 58/154 (37%), Positives = 88/154 (57%)
Frame = +3
Query: 117 GPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQY 296
GP+G R K+ V I + + ++ +V KK A V T H+EN+I GV +GF+Y
Sbjct: 48 GPKGENTRYLKYRGVFIEVGDGKV-RVYTTSPKKKHKAMVGTFAGHIENLITGVKEGFEY 106
Query: 297 KMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXXVKMAPGVTVVNSPKQKDELIIEGNS 476
++ VYAHFPI V EGN +I I NF+GEK+ K+ V S + ++ + G
Sbjct: 107 HLKVVYAHFPIK-VRVEGNEVI-IENFIGEKHPRRAKIVGRAQVEISGQ---DIYVRGID 161
Query: 477 LEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSXK 578
+E+ +AA ++Q+T +K KD R F DG+Y+ K
Sbjct: 162 IEECGQTAANLEQATKIKRKDPRVFQDGIYIVKK 195
>UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2;
environmental samples|Rep: 50S ribosomal protein L6P -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 188
Score = 100 bits (240), Expect = 2e-20
Identities = 59/176 (33%), Positives = 94/176 (53%), Gaps = 2/176 (1%)
Frame = +3
Query: 57 KVKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 236
K+ +P+G+T V VT L R F+H +++R + L +V KKE A
Sbjct: 10 KISLPEGVTAAVNGNDVTVAKDGNSLTREFRHPRIEVRDSSGEL-EVFVNLPRKKEKALA 68
Query: 237 RTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKY--IXXVKM 410
T +H+ NM +GV GF+YK++AVY+HFP+ + GN + + N GEK + +
Sbjct: 69 GTWAAHLTNMARGVDSGFEYKLKAVYSHFPMT-IRVNGNQ-MTVTNLFGEKVPRVAALPW 126
Query: 411 APGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSXK 578
+P V + K ++ + G E V +AA I++S +KN+D R F DG+Y+ K
Sbjct: 127 SPAEVEV-KVQNKTDVTVSGADREKVGQTAANIERSCRIKNRDRRVFQDGIYIVSK 181
>UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein L6P/L9E -
Cenarchaeum symbiosum
Length = 165
Score = 100 bits (239), Expect = 3e-20
Identities = 62/161 (38%), Positives = 95/161 (59%), Gaps = 1/161 (0%)
Frame = +3
Query: 99 RLVTDKGPRGVLKRNFKHLAVDIRMVNPRL-LKVEKWFGSKKELAAVRTVCSHVENMIKG 275
R++ KG G ++F+ + V IR+ + LK E K++LA + T S V N+ +G
Sbjct: 8 RMLHVKGKLGSAHKSFRKIPVGIRIDGSSVVLKAEGT--RKRDLAILNTARSIVRNLCEG 65
Query: 276 VTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXXVKMAPGVTVVNSPKQKDE 455
V G+ K++ VYAHFPI + +G I+ + NF GE+ K+ G VV+ + ++
Sbjct: 66 VGVGYTIKLKVVYAHFPIT-IKQDGAMIL-VENFQGERSARKAKIVGGTKVVS---KGED 120
Query: 456 LIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSXK 578
+I+ G+ L DVS +AA ++Q T VKNKD R FLDG+YV K
Sbjct: 121 VIVTGHVLTDVSQTAANLEQGTKVKNKDHRVFLDGVYVYEK 161
>UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L6P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 178
Score = 95.1 bits (226), Expect = 1e-18
Identities = 57/174 (32%), Positives = 96/174 (55%)
Frame = +3
Query: 57 KVKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 236
+++IP+ + +T +G G + R + +D+ V+ + +E + K ++ +
Sbjct: 5 ELEIPEDVDAEQDHLDITVEGDNGSVTRRLWYPDIDVS-VDGDTVVIESDEDNAKTMSTI 63
Query: 237 RTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXXVKMAP 416
T SH+ENM GVT+G++Y M Y+HFP+ V EG+ ++ I NFLGEK +
Sbjct: 64 GTFQSHIENMFHGVTEGWEYGMEVFYSHFPMQ-VNVEGDEVV-IENFLGEKAPRRTTI-H 120
Query: 417 GVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSXK 578
G T V +EL + G +E V +AA I+Q T + +KD+R F DG+Y++ K
Sbjct: 121 GDTDVEI--DGEELTVSGPDIEAVGQTAADIEQLTRINDKDVRVFQDGVYITRK 172
>UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellular
organisms|Rep: 50S ribosomal protein L6P - Methanopyrus
kandleri
Length = 204
Score = 91.1 bits (216), Expect = 2e-17
Identities = 55/184 (29%), Positives = 101/184 (54%), Gaps = 6/184 (3%)
Frame = +3
Query: 45 VANQKVKIPDGLTVHVKXRL-----VTDKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWF 209
V ++VKI D + + + R VT KGP+G + + F + V + + + ++ +
Sbjct: 18 VMEERVKIKDDVEIEISQREDRRYEVTVKGPKGEVTKEFYYPDVYLWVEDDEVV-IAATR 76
Query: 210 GSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEK 389
++++ A + + +++ENM KGVT+G +YK++ VY+HFP + + I NF+GE
Sbjct: 77 SNRRQKAILGMIKAYIENMQKGVTEGHEYKLKLVYSHFPPEVKVDQKEGKVYIENFMGEN 136
Query: 390 YIXXVKMA-PGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLY 566
++ P T V Q ++I+ G E V +AA ++Q+T +K++D R F DG+Y
Sbjct: 137 VPRVAEIVDPENTEV--IVQGQDIIVRGIDKEAVGQTAANLEQATYIKDRDPRVFQDGIY 194
Query: 567 VSXK 578
+ K
Sbjct: 195 IVEK 198
>UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L6P -
Pyrobaculum aerophilum
Length = 196
Score = 89.8 bits (213), Expect = 4e-17
Identities = 54/161 (33%), Positives = 96/161 (59%), Gaps = 5/161 (3%)
Frame = +3
Query: 54 QKVKIPDGLTVHVKXR-----LVTDKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSK 218
++V+IP G++V ++ +V KGP G + + FK+ V + + + +++ +E + K
Sbjct: 8 EEVEIPKGVSVSIERTGPFDYIVKVKGPLGEVTKEFKNTPVVMSLQDGKIV-MEVFKARK 66
Query: 219 KELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIX 398
+E A + T ++NM GVT+G++YK++ +Y HFP+ V +GN ++ I NFLG K
Sbjct: 67 REYAILGTYKGILKNMFLGVTRGWRYKLKVIYTHFPM-LVKVQGNQLV-IENFLGRKSKI 124
Query: 399 XVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQST 521
+ + GV V K K++++IEG E VS+ AA +Q +T
Sbjct: 125 TLNIPKGVKV--EVKGKEDIVIEGIDRELVSTFAAAVQAAT 163
>UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1;
Thermoplasma volcanium|Rep: 50S ribosomal protein L6P -
Thermoplasma volcanium
Length = 178
Score = 87.8 bits (208), Expect = 2e-16
Identities = 54/173 (31%), Positives = 96/173 (55%)
Frame = +3
Query: 60 VKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 239
++IP + V + +++ L++ F V + +V +K+ K + +E V
Sbjct: 10 IEIPKDVKVGLSGTMLSMTFGNKKLEKKFADNYVRL-LVEDNKIKIVKSKNNSRERGIVG 68
Query: 240 TVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXXVKMAPG 419
T S + NM+KG+ +GFQY+M+ Y+HFP+ V+ +G +++ I NF GE+ ++ G
Sbjct: 69 TWASEISNMVKGLKEGFQYEMKIDYSHFPMR-VSVKGKTVV-IENFFGERSPRTAEIV-G 125
Query: 420 VTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSXK 578
T V+ + D L + G S +DV +AA I+++T +K D R F DG+Y+ K
Sbjct: 126 ETQVS--VKGDRLFLNGPSKKDVGETAANIERATIIKGFDPRVFQDGIYLISK 176
>UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A,
Solution Structure Of The N-Terminal Domain Of Human
Ribosomal Protein L9; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to Chain A, Solution Structure Of The
N-Terminal Domain Of Human Ribosomal Protein L9 -
Ornithorhynchus anatinus
Length = 143
Score = 79.8 bits (188), Expect = 4e-14
Identities = 38/83 (45%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Frame = +3
Query: 45 VANQKVKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRMVNPRLLK--VEKWFGSK 218
++NQ V IP + + +K R V KGP+G L R+F H+ V++ ++ +L K V+KW+G++
Sbjct: 5 LSNQTVDIPANIGIILKGRTVIVKGPQGSLHRDFNHINVELSLLGKKLKKFHVDKWWGNR 64
Query: 219 KELAAVRTVCSHVENMIKGVTKG 287
KELA V T+CS V+N IK VT G
Sbjct: 65 KELATVHTICSPVQNTIKWVTLG 87
>UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3;
Thermoplasmatales|Rep: 50S ribosomal protein L6P -
Picrophilus torridus
Length = 180
Score = 79.0 bits (186), Expect = 8e-14
Identities = 51/177 (28%), Positives = 89/177 (50%)
Frame = +3
Query: 39 KFVANQKVKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSK 218
K+ ++K+PD + ++ + KG G R F+ V + +K+ +K
Sbjct: 3 KWTEQAEIKLPDDVQATMENNELKIKGKLGEASRIFRDNYVKA-YIEGSSVKIATSKNNK 61
Query: 219 KELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIX 398
V T S + +I+GVTKGF+Y M+ + HFP+ V+ G+ +I + NFLGEK
Sbjct: 62 YTKGIVGTWYSETKLLIEGVTKGFEYHMKIDFTHFPMR-VSVRGDKLI-VENFLGEKSPR 119
Query: 399 XVKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRKFLDGLYV 569
K+ G V + D + I G + +AA I+++T +++ D R F DG+++
Sbjct: 120 SAKIVDGCKV---SVKGDRITINGIDKRKIGETAANIERATYIRHFDARVFQDGIFL 173
>UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 140
Score = 64.9 bits (151), Expect = 1e-09
Identities = 43/112 (38%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Frame = -1
Query: 590 HNSCFXRYIKTIQELSDILILDCSRLLDESSRARDIFQGVAFND*FILLFGRVNDGHTRC 411
+N R I TIQE +DIL+ D + LL+ SS R+ FQGV N+ FILL R G T
Sbjct: 21 NNGTSFRNINTIQEFTDILVSDTTDLLNISSILRNSFQGVTRNNQFILLSRRNFHGDTFM 80
Query: 410 HLYXXDVFLPQEVTYLNN*ITL--SGDTVNGEVSIHSTHLVLEAFSYSFNHV 261
+ F QE++ N +T+ + VN E+ I+ +HLV FS + + V
Sbjct: 81 DFNFSNSFFTQEISNFNVILTIFFNNVNVNWEMRINKSHLVFVTFSDTSDQV 132
>UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 92
Score = 56.4 bits (130), Expect = 5e-07
Identities = 27/71 (38%), Positives = 43/71 (60%)
Frame = +3
Query: 249 SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXXVKMAPGVTV 428
+H+++ + GF Y+MR+VYA FP N + E S+IE + +G+KYI V++ V
Sbjct: 21 NHLQSCSEHDQGGFHYRMRSVYAGFPTNVIIQENGSVIEHWSAMGKKYIHRVQIRTSVAF 80
Query: 429 VNSPKQKDELI 461
S QK+EL+
Sbjct: 81 YASQAQKNELM 91
>UniRef50_UPI000021E22B Cluster: PREDICTED: similar to ribosomal
protein L9; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L9 - Rattus norvegicus
Length = 77
Score = 55.2 bits (127), Expect = 1e-06
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Frame = +3
Query: 51 NQKVKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRMVNPRL--LKVEKWFGSKKE 224
NQ VKIP+ +V K RG L+R+F H+ +++R++ R L+V+KW + K
Sbjct: 7 NQAVKIPEN------AHIVIVKDTRGTLQRDFNHINIELRLLAKRKKQLQVDKWLKTMK- 59
Query: 225 LAAVRTVCSHVENMIKGV 278
LA T+ SHV+NMIK V
Sbjct: 60 LATAHTIYSHVQNMIKRV 77
>UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Pseudomonas syringae pv. phaseolicola (strain 1448A /
Race 6)
Length = 179
Score = 51.6 bits (118), Expect = 1e-05
Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 1/157 (0%)
Frame = +3
Query: 45 VANQKVKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRMVNPR-LLKVEKWFGSKK 221
VA VK+P G+ V + +L++ KGP+G L+ H +V++ +V L+ G ++
Sbjct: 4 VAKNPVKLPSGVEVKLVGQLLSVKGPKGTLEL-IIHSSVEVEIVEEAGELRFAARNGDQQ 62
Query: 222 ELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXX 401
A T + V NM++GV++GF+ K++ V + T N LG +
Sbjct: 63 TRAMAGTTRALVNNMVQGVSQGFERKLQLVGVGYKAQAKGTVLNLA------LGFSHPVD 116
Query: 402 VKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQ 512
++ G+T +P Q D ++I G + V AA I+
Sbjct: 117 YELPNGIT-AETPSQTD-ILIRGIDKQLVGQVAAEIR 151
>UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108;
Proteobacteria|Rep: 50S ribosomal protein L6 - Coxiella
burnetii
Length = 178
Score = 50.8 bits (116), Expect = 2e-05
Identities = 47/157 (29%), Positives = 75/157 (47%)
Frame = +3
Query: 45 VANQKVKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 224
VA +KIP G+ V+V + +T KG G L R H AV + + L + S
Sbjct: 5 VAKNPIKIPTGVEVNVAGQQITVKGKLGTLTRVI-HRAVKVTKTDAELQTICA-NDSPGS 62
Query: 225 LAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXXV 404
A T + + NM++GV GFQ K+ V + EG ++ +G + +
Sbjct: 63 NALAGTARAVLANMVQGVHTGFQRKLVMVGVGYR---AKAEGK---KLNLTVGLSHPVNI 116
Query: 405 KMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQ 515
+M G+T V +P Q E+I++G + VS AA I++
Sbjct: 117 EMPEGIT-VETPSQ-TEIIVKGADKQRVSQVAANIRE 151
>UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3;
Thermotogaceae|Rep: 50S ribosomal protein L6 - Petrotoga
mobilis SJ95
Length = 186
Score = 50.4 bits (115), Expect = 3e-05
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 6/92 (6%)
Frame = +3
Query: 45 VANQKVKIPDGLTVHVKXRLVTDKGPRGVLKRNF-KHLAVDIRMVNPRLLK----VEKWF 209
+A++ IPDG+ + V + + KG G L N ++L VD R N ++K V K
Sbjct: 6 IADKPTIIPDGVELSVDGQTIKIKGKNGELSLNLPEYLEVD-RDNNELMIKTKEGVVKRS 64
Query: 210 GSKKELAAVR-TVCSHVENMIKGVTKGFQYKM 302
+K L A+R T SHV NMIKGVT+G++ ++
Sbjct: 65 SDEKRLKALRGTFTSHVRNMIKGVTEGYKKEL 96
>UniRef50_Q661C7 Cluster: 50S ribosomal protein L6; n=9; cellular
organisms|Rep: 50S ribosomal protein L6 - Borrelia
garinii
Length = 180
Score = 48.0 bits (109), Expect = 2e-04
Identities = 28/77 (36%), Positives = 46/77 (59%)
Frame = +3
Query: 60 VKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 239
+KIPD + + VK LV +G RG L ++ K ++++++ N ++ V + F KK A
Sbjct: 9 IKIPDTVKIDVKGNLVIVEGTRGKLVQDIKD-SINVKVENGSVI-VNRAFNDKKTKAYHG 66
Query: 240 TVCSHVENMIKGVTKGF 290
S + NM+KGVT+GF
Sbjct: 67 LYRSLIFNMVKGVTEGF 83
>UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40;
Bacteria|Rep: 50S ribosomal protein L6 - Oceanobacillus
iheyensis
Length = 178
Score = 47.2 bits (107), Expect = 3e-04
Identities = 29/89 (32%), Positives = 47/89 (52%)
Frame = +3
Query: 45 VANQKVKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 224
V + V+IP+G+ + + VT KGP+G L R H + I + +L VE+ K+
Sbjct: 4 VGLKPVEIPEGVELKLDNNTVTVKGPKGELSREL-HPDMKIN-IEDNVLTVERPSDHKEH 61
Query: 225 LAAVRTVCSHVENMIKGVTKGFQYKMRAV 311
A T S + NM+ GV+KGF+ + +
Sbjct: 62 RALHGTTRSLINNMVIGVSKGFEKSLEII 90
>UniRef50_P46898 Cluster: 50S ribosomal protein L6; n=7;
Bacilli|Rep: 50S ribosomal protein L6 - Bacillus
subtilis
Length = 179
Score = 47.2 bits (107), Expect = 3e-04
Identities = 42/157 (26%), Positives = 75/157 (47%), Gaps = 1/157 (0%)
Frame = +3
Query: 45 VANQKVKIPDGLTVHVKXR-LVTDKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKK 221
V + ++IP +TV + V KGP+G L R F H ++I+ V +L V + K+
Sbjct: 4 VGKKLLEIPSDVTVTLNDNNTVAVKGPKGELTRTF-HPDMEIK-VEDNVLTVARPSDQKE 61
Query: 222 ELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXX 401
A T S + NM++GV+KGF+ + V + + GN ++ L Y
Sbjct: 62 HRALHGTTRSLLGNMVEGVSKGFERGLELVGVGYR---ASKSGNKLV-----LNVGYSHP 113
Query: 402 VKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQ 512
V++ P + + +++++G E V + AA I+
Sbjct: 114 VEIVPEEGIEIEVPSQTKVVVKGTDKERVGAIAANIR 150
>UniRef50_Q8R7W9 Cluster: 50S ribosomal protein L6; n=22;
Bacteria|Rep: 50S ribosomal protein L6 -
Thermoanaerobacter tengcongensis
Length = 180
Score = 46.8 bits (106), Expect = 4e-04
Identities = 41/153 (26%), Positives = 76/153 (49%), Gaps = 1/153 (0%)
Frame = +3
Query: 60 VKIPDGLTVHVK-XRLVTDKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAV 236
+ IP G+ V V +VT KG +G L++ F + V+I + + ++ K K+E A
Sbjct: 9 IPIPKGVEVKVSPDNVVTVKGAKGTLEKKFPPI-VNIEVRDGEVVVTRKG-DDKEERAMH 66
Query: 237 RTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXXVKMAP 416
T + + NM+KGVT+GF+ + V + +G + I N +G + ++ P
Sbjct: 67 GTTRAIIANMVKGVTEGFEKALEIVGVGYR---AAKQGKKL--ILN-VGYSHPVEIEEEP 120
Query: 417 GVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQ 515
G+ ++ + + +I+ G E V AA I++
Sbjct: 121 GIEII--VEGNNRIIVRGADKERVGQVAANIRR 151
>UniRef50_Q847P4 Cluster: 50S ribosomal protein L6; n=1; Aster
yellows phytoplasma|Rep: 50S ribosomal protein L6 -
Aster yellows phytoplasma
Length = 175
Score = 46.0 bits (104), Expect = 7e-04
Identities = 37/157 (23%), Positives = 72/157 (45%), Gaps = 1/157 (0%)
Frame = +3
Query: 45 VANQKVKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRMV-NPRLLKVEKWFGSKK 221
+ N V IP+ + V + ++ KGP G L + + DI ++ N + V++ KK
Sbjct: 12 IGNIPVLIPNNVFVKKQDNIIYIKGPLGKLNQE---IIGDINIIINHNNIIVKRKHNDKK 68
Query: 222 ELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXX 401
A + NMIKGV+ GF+ K+ + F N + N I+ + +G +
Sbjct: 69 NRALHGLYRMLIYNMIKGVSNGFKKKLELIGVGFRAN-INNNNNQILNLN--IGYSHNIM 125
Query: 402 VKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQ 512
+K+ +T+ + ++I++ + + AA I+
Sbjct: 126 IKLPQSITLEVKMDKNPQIILKSYDKQLLGIVAAKIR 162
>UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 167
Score = 44.4 bits (100), Expect = 0.002
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 1/150 (0%)
Frame = +3
Query: 99 RLVTDKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGV 278
+L+ GPRG+L RNFKH ++DI +V+K KE+ + + +++++
Sbjct: 53 KLIMIIGPRGILNRNFKHASLDI--------QVQKEI---KEIKQIGLIKIEYQDVVQYS 101
Query: 279 TKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXXVKMAPGVTVVNSP-KQKDE 455
+ FQ K A +I+N + + GV + ++K+
Sbjct: 102 KQRFQVKSIAA-----------------QIKNMIRG-------ITSGVVITRKEAEEKNV 137
Query: 456 LIIEGNSLEDVSSSAALIQQSTTVKNKDIR 545
LI+ N L +VS + ALI Q+ VKNKDIR
Sbjct: 138 LILSANDLNNVSLTCALIHQACAVKNKDIR 167
>UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular
organisms|Rep: 50S ribosomal protein L6 - Thermotoga
maritima
Length = 184
Score = 43.2 bits (97), Expect = 0.005
Identities = 25/94 (26%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Frame = +3
Query: 45 VANQKVKIPDGLTVHVKXRLVTDKGPRGVLKRNF-KHLAVDIR----MVNPRLLKVEKWF 209
+A + + +P G+TV +K +V KGP+G L + F ++ +++ V P ++ +
Sbjct: 4 LAKKPIVLPQGVTVEIKDNVVKVKGPKGELSQEFLPYVKIEVEGNEVWVRPNEEQIIRKS 63
Query: 210 GSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAV 311
+K T S + NM+ GVT+G++ ++ V
Sbjct: 64 DWRKVKMFQGTYWSLIRNMVVGVTEGYKKELEIV 97
>UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain WH7803)
Length = 179
Score = 41.9 bits (94), Expect = 0.011
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = +3
Query: 45 VANQKVKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 224
+ + IPD ++V + VT KGP+G LKR V + V+ ++ K++
Sbjct: 4 IGKSPIPIPDKVSVSLDGLAVTVKGPKGELKRTLPD-GVTVNQVDNTIVVAPT--SEKRQ 60
Query: 225 LAAVRTVC-SHVENMIKGVTKGFQYKMRAV 311
+C + V NMI+GV+KG+ K+ V
Sbjct: 61 SRERHGLCRTLVANMIEGVSKGYSKKLEIV 90
>UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34;
Bacteria|Rep: 50S ribosomal protein L6 - Bacteroides
thetaiotaomicron
Length = 189
Score = 41.5 bits (93), Expect = 0.014
Identities = 39/140 (27%), Positives = 74/140 (52%), Gaps = 5/140 (3%)
Frame = +3
Query: 60 VKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRMVNPRLLKVE---KWFGSKKELA 230
+ IP G+TV +K +VT KGP+G L + + + A+++ + + + E + + K+
Sbjct: 9 ISIPAGVTVTLKDDVVTVKGPKGELSQ-YVNPAINVAIEDGHVTLTENEKEMIDNPKQKH 67
Query: 231 AVRTVC-SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXXVK 407
A + S V NM+ GV++G++ ++ V + + +GN IIE+ LG + ++
Sbjct: 68 AFHGLYRSLVHNMVVGVSEGYKKELELVGVGYR---ASNQGN-IIELA--LGYTHNIFIQ 121
Query: 408 MAPGVTV-VNSPKQKDELII 464
+ V V S + K+ LII
Sbjct: 122 LPAEVKVETKSERNKNPLII 141
>UniRef50_Q2JIL3 Cluster: 50S ribosomal protein L6; n=44; cellular
organisms|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain JA-2-3B'a(2-13)) (Cyanobacteria
bacteriumYellowstone B-Prime)
Length = 181
Score = 40.3 bits (90), Expect = 0.033
Identities = 32/157 (20%), Positives = 77/157 (49%), Gaps = 1/157 (0%)
Frame = +3
Query: 45 VANQKVKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 224
+ + + +P + + + + + KGP+G L R+ L + ++ N ++L V + +
Sbjct: 4 IGRRPIALPAKVEIQIDGQHIAVKGPKGQLSRSLPPL-ITVQQ-NAQMLTVSR-LNDSRP 60
Query: 225 LAAVRTVC-SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXX 401
+ +C + V NM+ GV+KGF+ ++ V + +G+ + + N +G +
Sbjct: 61 ARQLHGLCRTLVANMVDGVSKGFERRLELVGVGYR---AAIQGSKL--VLN-VGYSHPVE 114
Query: 402 VKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQ 512
+ PG+ + + + + +++ G E V ++AA I+
Sbjct: 115 IPFPPGIQI--AVEGNNIIVVSGTDKELVGNTAARIR 149
>UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16;
Firmicutes|Rep: 50S ribosomal protein L6 - Onion yellows
phytoplasma
Length = 184
Score = 39.9 bits (89), Expect = 0.044
Identities = 24/91 (26%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Frame = +3
Query: 45 VANQKVKIPDGLTVHVKXR-LVTDKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKK 221
V N+ +++P+ + V +K R ++ +GP+G L+ F H + + N + K +
Sbjct: 4 VGNKAIEVPNAVKVDIKDRNFISVEGPKGKLEYQFNHR---LTITNENKVITVKRPNDEI 60
Query: 222 ELAAVR-TVCSHVENMIKGVTKGFQYKMRAV 311
+ + T + + NM++GV+KGFQ ++ V
Sbjct: 61 FMKKIHGTTRALLSNMVEGVSKGFQKTLKIV 91
>UniRef50_Q6KI40 Cluster: 50S ribosomal protein l6; n=4;
Mycoplasma|Rep: 50S ribosomal protein l6 - Mycoplasma
mobile
Length = 179
Score = 38.3 bits (85), Expect = 0.13
Identities = 41/161 (25%), Positives = 75/161 (46%), Gaps = 1/161 (0%)
Frame = +3
Query: 45 VANQKVKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHL-AVDIRMVNPRLLKVEKWFGSKK 221
V + + +P + +++K LV KG GVL N L A+++ + ++ + +K+
Sbjct: 4 VGRRVLTLPKDVELNIKNNLVEIKGKLGVLTFNVNPLIAIEVENHEVKTIRANEEKHTKQ 63
Query: 222 ELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXX 401
++ +ENMI GV+KGF+ ++ + + S IEI G ++
Sbjct: 64 LHGTTNSI---IENMIIGVSKGFKKELEIK----GVGYKSALKGSQIEIA--AGYSHLVY 114
Query: 402 VKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTT 524
V + P V PK ++II G + V AA+I++ T
Sbjct: 115 VNV-PKELKVEIPK-PTQIIISGIDNQKVGELAAVIRKVRT 153
>UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain CC9311)
Length = 179
Score = 38.3 bits (85), Expect = 0.13
Identities = 35/157 (22%), Positives = 68/157 (43%), Gaps = 1/157 (0%)
Frame = +3
Query: 45 VANQKVKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 224
+ + IPD + V + VT KGP+G LKR V + V+ ++ +K+
Sbjct: 4 IGKNPIPIPDKVNVTLSGLAVTVKGPKGELKRTLPS-GVSVNQVDNSIVVAPT--STKRS 60
Query: 225 LAAVRTVC-SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXX 401
+C + V NM+ GV++G+ K+ V + +G +++ + Y
Sbjct: 61 SRERHGLCRTLVANMVIGVSQGYSKKLEIVGVG---SRAQVKGKTLV-----VSAGYSHP 112
Query: 402 VKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQ 512
V++ P + + + + + G E V + AA I+
Sbjct: 113 VEVVPPEGITFTVENNTNVTVSGTDKELVGNEAAKIR 149
>UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Dehalococcoides
sp. (strain CBDB1)
Length = 182
Score = 37.9 bits (84), Expect = 0.18
Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 1/157 (0%)
Frame = +3
Query: 45 VANQKVKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 224
+ +K+P G+ V + VT KGP+G L R+F+ V I L+ G+ K
Sbjct: 4 IGKMPIKVPPGIKVDINGNDVTVKGPKGTLSRSFRP-EVTINREGDYLVVAP--VGTDKA 60
Query: 225 LAAVRTVC-SHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXX 401
+ + + ++NMI GV GF + V + +G+ ++ +
Sbjct: 61 TRSFFGLSRTLLDNMIVGVKDGFDKNLEIVGVGMRAD---KDGDKVV-----FKVGFSHS 112
Query: 402 VKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQ 512
V +AP + S ++ + G + EDV AA I+
Sbjct: 113 VTVAPPAGITLSVDGTTKVKVSGINKEDVGQMAAEIR 149
>UniRef50_Q9ZCS0 Cluster: 50S ribosomal protein L6; n=10;
Rickettsieae|Rep: 50S ribosomal protein L6 - Rickettsia
prowazekii
Length = 177
Score = 37.5 bits (83), Expect = 0.23
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +3
Query: 45 VANQKVKIPDGLTVHVKXRLVTDKGPRGVLKRNFK-HLAVDIRMVNPRLLKVEKWFGSKK 221
V + IP+G+ V + V GP+G L + FK ++A+ ++ L V+ +K
Sbjct: 4 VGKLPITIPEGVKVGLNDLEVKISGPKGELSKTFKGNIAI---IMEENKLVVKPLAVNKN 60
Query: 222 ELAAVRTVCSHVENMIKGVTKGFQYKM 302
A T S + NMI GV +GF+ K+
Sbjct: 61 ARAMWGTARSIICNMITGVKEGFKLKL 87
>UniRef50_Q9A8T8 Cluster: 50S ribosomal protein L6; n=16;
Bacteria|Rep: 50S ribosomal protein L6 - Caulobacter
crescentus (Caulobacter vibrioides)
Length = 177
Score = 37.1 bits (82), Expect = 0.31
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 2/169 (1%)
Frame = +3
Query: 45 VANQKVKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 224
+ + V IP G+ V + + VT KGP+G L V+++ LL + +K+
Sbjct: 4 IGKKAVAIPSGVQVTLAGQTVTVKGPKGQLSWTIAD-EVEVKQEGAELLLAPR-VDTKRA 61
Query: 225 LAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXXV 404
+ V NM+ GVT GF+ + V + +G + + ++ LG + V
Sbjct: 62 KGMWGLSRTLVANMVHGVTVGFEESLELVGVGYR---AAMKGTA-LSLQ--LGFSHDVDV 115
Query: 405 KMAPGVTVVNSPKQKDELI--IEGNSLEDVSSSAALIQQSTTVKNKDIR 545
GVT PKQ + I I+ ++ ++++ I+ K K +R
Sbjct: 116 AAPAGVTFA-VPKQTEIKIAGIDKQAVGEIAAKIRRIRPPEPYKGKGVR 163
>UniRef50_Q9RSL3 Cluster: 50S ribosomal protein L6; n=65; cellular
organisms|Rep: 50S ribosomal protein L6 - Deinococcus
radiodurans
Length = 185
Score = 36.7 bits (81), Expect = 0.41
Identities = 23/82 (28%), Positives = 43/82 (52%)
Frame = +3
Query: 45 VANQKVKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 224
+ Q + +P G+TV+ + + KGP+G L + + + +R +LL VE+ ++K
Sbjct: 4 IGKQPIAVPSGVTVNAQDGVFKVKGPKGELTVPY-NTELTVRQDGDQLL-VERPSDAQKH 61
Query: 225 LAAVRTVCSHVENMIKGVTKGF 290
A + V N +KGV+ G+
Sbjct: 62 RALHGLTRTLVANAVKGVSDGY 83
>UniRef50_Q6E783 Cluster: Ribosomal protein L6; n=5; Oomycetes|Rep:
Ribosomal protein L6 - Saprolegnia ferax
Length = 204
Score = 36.3 bits (80), Expect = 0.54
Identities = 31/144 (21%), Positives = 61/144 (42%)
Frame = +3
Query: 42 FVANQKVKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKK 221
F ++K++IP + + +K + +GP G + N H N LL +K
Sbjct: 27 FNIHEKIRIPKNINIVLKKNQLILQGPLGSIDLNIMHSLNYFIKNNNILLSFNSLHLKRK 86
Query: 222 ELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXX 401
+ + + S ++ IKG+ +GF K+ E N I++ LG +
Sbjct: 87 KKSFLNLYKSLIKLKIKGILQGF--KLNLFLKGLGFKAFIEEKNLILK----LGYSHSIT 140
Query: 402 VKMAPGVTVVNSPKQKDELIIEGN 473
+++ + ++N Q ++LI N
Sbjct: 141 IEIPENIKIIN---QTNKLIFSSN 161
>UniRef50_O23049 Cluster: 50S ribosomal protein L6, chloroplast
precursor; n=8; Magnoliophyta|Rep: 50S ribosomal protein
L6, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 223
Score = 36.3 bits (80), Expect = 0.54
Identities = 20/86 (23%), Positives = 43/86 (50%)
Frame = +3
Query: 45 VANQKVKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 224
+ Q + +P +T+ ++ + + KGP G L + V++ L+V+K +++
Sbjct: 46 IGKQPIAVPSNVTIALEGQDLKVKGPLGELALTYPR-EVELTKEESGFLRVKKTVETRRA 104
Query: 225 LAAVRTVCSHVENMIKGVTKGFQYKM 302
+ +NM+ GV+KGF+ K+
Sbjct: 105 NQMHGLFRTLTDNMVVGVSKGFEKKL 130
>UniRef50_Q7VQD3 Cluster: 50S ribosomal subunit protein L6; n=2;
Candidatus Blochmannia|Rep: 50S ribosomal subunit
protein L6 - Blochmannia floridanus
Length = 181
Score = 35.9 bits (79), Expect = 0.72
Identities = 22/82 (26%), Positives = 41/82 (50%)
Frame = +3
Query: 66 IPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTV 245
IP+ + + ++ + G G L F H + ++ N + L V + + A + T
Sbjct: 13 IPNEIQITIQDCCILVVGVLGNLSYKF-HNFIGVQFSNVKNLIVYSRYRNHVNRALLGTT 71
Query: 246 CSHVENMIKGVTKGFQYKMRAV 311
CS + +MI GVT+GF K++ +
Sbjct: 72 CSLINSMIVGVTEGFVKKLQLI 93
>UniRef50_Q8KAI6 Cluster: 50S ribosomal protein L6; n=15;
Bacteria|Rep: 50S ribosomal protein L6 - Chlorobium
tepidum
Length = 179
Score = 35.9 bits (79), Expect = 0.72
Identities = 24/86 (27%), Positives = 39/86 (45%)
Frame = +3
Query: 45 VANQKVKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 224
+ +++ D V VK ++ GP+G L + I V + V++ SK+
Sbjct: 4 IGKMPIRLADQAQVEVKENMINVTGPKGALSQALVDEV--IVSVADGAVTVQRKDDSKRA 61
Query: 225 LAAVRTVCSHVENMIKGVTKGFQYKM 302
A V NM++GVTKGF K+
Sbjct: 62 RAMHGLYRMLVSNMVEGVTKGFTRKL 87
>UniRef50_Q98PZ7 Cluster: 50S ribosomal protein L6; n=29;
Bacteria|Rep: 50S ribosomal protein L6 - Mycoplasma
pulmonis
Length = 179
Score = 35.5 bits (78), Expect = 0.95
Identities = 25/87 (28%), Positives = 43/87 (49%)
Frame = +3
Query: 45 VANQKVKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 224
V + ++IP G V + KG G L R F V+I+ N ++ VE+ K
Sbjct: 4 VGKRIIQIPSGTEVKIDGSFFEVKGKLGSLSRLFSPF-VNIKHENNQI-SVERLNELKPT 61
Query: 225 LAAVRTVCSHVENMIKGVTKGFQYKMR 305
T + + NM+KGV++GF+ +++
Sbjct: 62 KQLHGTTNALIANMVKGVSEGFKKELK 88
>UniRef50_A0YJS9 Cluster: 50S ribosomal protein L6; n=2; cellular
organisms|Rep: 50S ribosomal protein L6 - Lyngbya sp.
PCC 8106
Length = 181
Score = 35.1 bits (77), Expect = 1.3
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 1/157 (0%)
Frame = +3
Query: 45 VANQKVKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 224
+ + + IP +T ++ + + KGP+G L R + + + L+K ++
Sbjct: 4 IGKRPIPIPPKVTFTIEGQHIIVKGPKGELSRVLPEKVILEQDGDTLLVKRRDESRVARQ 63
Query: 225 LAAV-RTVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXX 401
L + RT+ V NM+ GV+KGF+ ++ + +G ++I L Y
Sbjct: 64 LHGLSRTL---VANMVDGVSKGFEKRLEIQGVGYR---AQVQGKNLI-----LNVGYSKP 112
Query: 402 VKMAPGVTVVNSPKQKDELIIEGNSLEDVSSSAALIQ 512
V+M P + + + +II G E V + AA I+
Sbjct: 113 VEMNPPQGITVAVENNTNVIISGIDKEVVGNIAAQIR 149
>UniRef50_Q4QI55 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 946
Score = 35.1 bits (77), Expect = 1.3
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -2
Query: 271 LIMFSTCEQTVLTAASSFLDPNHFSTFRRRGFTMRMSTA--KCLKFLLRTPRGPLSVTKR 98
L +F+ C ++V+ A+S L P+H + R GF + TA + FL R PL + R
Sbjct: 22 LELFAACRESVVHVAASHLLPDHVAVTTRNGFVELIDTATGEFRLFLTYLDRIPLDASLR 81
Query: 97 XFT 89
F+
Sbjct: 82 CFS 84
>UniRef50_Q9ZI38 Cluster: 50S ribosomal protein L6; n=2; Aquifex
pyrophilus|Rep: 50S ribosomal protein L6 - Aquifex
pyrophilus
Length = 187
Score = 35.1 bits (77), Expect = 1.3
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +3
Query: 93 KXRLVTDKGPRGVLKRNFKHLAVDIRM-VNPRLLKVEKWFGSKKELAAVRTVCSHVENMI 269
K VT +GP+G L+ N H + + + R +K+++ A T+ + ++NMI
Sbjct: 22 KEHKVTVEGPKGKLELNI-HPDIKVTLNQQERWIKLDRPSDRSFHKAIHGTMAALIKNMI 80
Query: 270 KGVTKGF 290
KGVT+GF
Sbjct: 81 KGVTEGF 87
>UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3;
Planctomycetaceae|Rep: 50S ribosomal protein L6 -
Rhodopirellula baltica
Length = 181
Score = 34.7 bits (76), Expect = 1.7
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Frame = +3
Query: 45 VANQKVKIPDGLTVHVKXRLVTDKGPRGVLKRNFKH-----LAVDIRMVNPRLLKVEKWF 209
+ N+ V IP G+TV + R + +GP+G K +FKH +AVD N ++ +
Sbjct: 4 IGNKPVAIPSGVTVSIADRNIDVEGPKG--KLSFKHRPEVKVAVD-SDTNQVIVSRDGDD 60
Query: 210 GSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAV 311
+E + V NM+ GV G++ K+ V
Sbjct: 61 RPSREFHGLTRAI--VANMLVGVKDGYEKKLEIV 92
>UniRef50_O67565 Cluster: 50S ribosomal protein L6; n=1; Aquifex
aeolicus|Rep: 50S ribosomal protein L6 - Aquifex
aeolicus
Length = 183
Score = 34.7 bits (76), Expect = 1.7
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Frame = +3
Query: 45 VANQKVKIPDGLTVHV--KXRLVTDKGPRGVLKRNFKHLAVDIRM-VNPRLLKVEKWFGS 215
+A + + P+ + V+ K + +GP+G L+ N H + + + R +K+++
Sbjct: 4 LAKKPIPYPENVKVNYVEKEHKIVVEGPKGKLELNV-HPDIKVTVNQQERWIKLDRPTDR 62
Query: 216 KKELAAVRTVCSHVENMIKGVTKGF 290
A T+ + V+NMIKGVT+GF
Sbjct: 63 SFHKAIHGTMAALVKNMIKGVTEGF 87
>UniRef50_Q8XPL8 Cluster: Putative surface-exposed adhesin protein;
n=1; Ralstonia solanacearum|Rep: Putative
surface-exposed adhesin protein - Ralstonia solanacearum
(Pseudomonas solanacearum)
Length = 1309
Score = 33.5 bits (73), Expect = 3.8
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +3
Query: 471 NSLEDVSSSAALIQQSTTVKNKDIRKFLDG 560
NS++ +SSSA+L+QQS K+ + K LDG
Sbjct: 150 NSIKSISSSASLVQQSAAGKDITVAKDLDG 179
>UniRef50_Q8DML8 Cluster: 50S ribosomal protein L6; n=4; cellular
organisms|Rep: 50S ribosomal protein L6 - Synechococcus
elongatus (Thermosynechococcus elongatus)
Length = 187
Score = 33.5 bits (73), Expect = 3.8
Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +3
Query: 45 VANQKVKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 224
+ + + +P +T+ + + VT KGP+G L R F ++ +V V K +
Sbjct: 4 IGKRPIPLPKNVTLTLDGQQVTVKGPKGQLSRVFPP---EVNVVQEGEAIVVKRRDDSRP 60
Query: 225 LAAVRTVC-SHVENMIKGVTKGFQYKM 302
+C + + NM++GV++GF K+
Sbjct: 61 AKERHGLCRTLLANMVEGVSQGFTKKL 87
>UniRef50_Q11HR7 Cluster: 50S ribosomal protein L6; n=73;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Mesorhizobium sp. (strain BNC1)
Length = 177
Score = 33.5 bits (73), Expect = 3.8
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 45 VANQKVKIPDGLTVHVKXRLVTDKGPRGVLK 137
+ + V +P G+T +V ++VT KGP+G LK
Sbjct: 4 IGKKPVPVPQGVTANVDGQVVTAKGPKGELK 34
>UniRef50_Q5FM76 Cluster: 50S ribosomal protein L6; n=10;
Firmicutes|Rep: 50S ribosomal protein L6 - Lactobacillus
acidophilus
Length = 176
Score = 33.5 bits (73), Expect = 3.8
Identities = 36/151 (23%), Positives = 70/151 (46%)
Frame = +3
Query: 60 VKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVR 239
+++PD +TV + +T KGP+G L R F + N + + S+ + A
Sbjct: 9 IEVPDSVTVTKEGDNITVKGPKGELTRYFDPKITFEQ--NDGEINFSR--SSESDKALHG 64
Query: 240 TVCSHVENMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSIIEIRNFLGEKYIXXVKMAPG 419
T +++ +MI+GV G++ ++ + + +GN +I +G + + G
Sbjct: 65 TERANLASMIEGVLNGYKKTLKLIGVGYR---AQAQGN---KITLNVGYSHPVVLTAPEG 118
Query: 420 VTVVNSPKQKDELIIEGNSLEDVSSSAALIQ 512
V+V ++ +EG S +DV AA I+
Sbjct: 119 VSV--KATSATDVEVEGVSKQDVGQFAAEIR 147
>UniRef50_A6EPW1 Cluster: Putative uncharacterized protein; n=1;
unidentified eubacterium SCB49|Rep: Putative
uncharacterized protein - unidentified eubacterium SCB49
Length = 378
Score = 33.1 bits (72), Expect = 5.0
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = -2
Query: 505 RAAELETSSKELPSMINSSFCLGELTTVTPGAIFTXXMYFSPKKLRISIIELPSVVTQL 329
RAAEL T+ +++ + N F GEL T T + PKKL I I + + Q+
Sbjct: 35 RAAELATAKRQVEILSNGIFANGELPTFAKKIKETNQLPLRPKKLEILQINVGYMCNQV 93
>UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3;
Platyhelminthes|Rep: DEAD box polypeptide 19 protein -
Dugesia japonica (Planarian)
Length = 434
Score = 33.1 bits (72), Expect = 5.0
Identities = 24/94 (25%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
Frame = -2
Query: 472 LPSMINSSFCLGELTTVTPGAIFTXXMYFSPKKLRISIIELPSVVTQLMGK*AYTARILY 293
L INS +G T+ +YF+PKKL++ +++ ++ + RI
Sbjct: 162 LEGQINSQIIIGTPGTLKFWTTDNSSLYFNPKKLKVFVLDEADILIETPEFLNIAKRIKS 221
Query: 292 WKPLVTPLIMFS-TCEQTVLTAASSFL-DPNHFS 197
+++FS T ++ V+ A F+ PN FS
Sbjct: 222 KVTNNCQILLFSATYDERVMDFAHDFVPQPNEFS 255
>UniRef50_UPI000049A156 Cluster: ankyrin; n=9; Entamoeba histolytica
HM-1:IMSS|Rep: ankyrin - Entamoeba histolytica HM-1:IMSS
Length = 866
Score = 32.7 bits (71), Expect = 6.7
Identities = 20/75 (26%), Positives = 35/75 (46%)
Frame = +3
Query: 141 NFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVENMIKGVTKGFQYKMRAVYAH 320
+F LAVD ++N +L+K + ++K + T+ HV +K + G Y Y
Sbjct: 683 DFPELAVDDEILNKKLIKYNNEWNAQKRMEIFSTIVGHVGEHVKMI--GPFYCNFGRYIS 740
Query: 321 FPINCVTTEGNSIIE 365
NC+ +I+E
Sbjct: 741 IGDNCIINFNCTILE 755
>UniRef50_Q6Q8X3 Cluster: 50S ribosomal protein L6; n=6;
Proteobacteria|Rep: 50S ribosomal protein L6 -
uncultured marine gamma proteobacterium EBAC20E09
Length = 182
Score = 32.7 bits (71), Expect = 6.7
Identities = 20/90 (22%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Frame = +3
Query: 45 VANQKVKIPDGLTVHVKXRLVTDKGPRGVLKRNFKH-LAVDIRMVNPRLLKVEKWFGSKK 221
VA + IP+ + + + +V KG +G L +++D+ +++ ++ +++
Sbjct: 4 VAKNPITIPENVDLSINENVVIVKGSKGELDFVLPDTISLDVA---DKVITIKYDEENQQ 60
Query: 222 ELAAVRTVCSHVENMIKGVTKGFQYKMRAV 311
+A T S + NM+ GV++GF+ K+ +
Sbjct: 61 SVALAGTSRSLINNMVIGVSEGFEKKLELI 90
>UniRef50_Q4UCX9 Cluster: Glutamate-cysteine ligase, putative; n=1;
Theileria annulata|Rep: Glutamate-cysteine ligase,
putative - Theileria annulata
Length = 795
Score = 32.7 bits (71), Expect = 6.7
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 423 TVVNSPKQKDELIIEGNSLEDVSSSAALIQQSTTVKNKDIRK 548
TVV P + ++ G+S+ED + + +++TT KDI K
Sbjct: 76 TVVTGPTTTNSTVVPGSSMEDSTVPNTVTEENTTTTTKDIIK 117
>UniRef50_Q1XDI8 Cluster: Chloroplast 50S ribosomal protein L6; n=4;
cellular organisms|Rep: Chloroplast 50S ribosomal
protein L6 - Porphyra yezoensis
Length = 180
Score = 32.7 bits (71), Expect = 6.7
Identities = 20/88 (22%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +3
Query: 45 VANQKVKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 224
+ + + +P L+ + +T GP+G L R +++ ++N + K G K
Sbjct: 4 IGKKIILLPTNLSTQFDGQTITVTGPKGTLSRTLP-AGINLEILNDTI--AVKTSGQTKM 60
Query: 225 LAAVRTVC-SHVENMIKGVTKGFQYKMR 305
+ + + + + NMI+GV+ GF K++
Sbjct: 61 ASQLHGLSRTLISNMIEGVSNGFFKKLQ 88
>UniRef50_Q1ZBZ7 Cluster: 50S ribosomal protein L6; n=1;
Psychromonas sp. CNPT3|Rep: 50S ribosomal protein L6 -
Psychromonas sp. CNPT3
Length = 128
Score = 32.3 bits (70), Expect = 8.8
Identities = 24/83 (28%), Positives = 41/83 (49%)
Frame = +3
Query: 45 VANQKVKIPDGLTVHVKXRLVTDKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKE 224
+A + + G+ V V + +T KG +G L R AV +++ + ++ G K
Sbjct: 4 IAKAPITVLAGVEVKVNGQEITLKGGKGELVRTLND-AVVVKLEDG-VITFAPVEGIKDA 61
Query: 225 LAAVRTVCSHVENMIKGVTKGFQ 293
A T ++V NM+ GVT GF+
Sbjct: 62 WAQAGTARANVNNMMIGVTTGFK 84
>UniRef50_Q112B1 Cluster: Taurine catabolism dioxygenase TauD/TfdA;
n=1; Trichodesmium erythraeum IMS101|Rep: Taurine
catabolism dioxygenase TauD/TfdA - Trichodesmium
erythraeum (strain IMS101)
Length = 371
Score = 32.3 bits (70), Expect = 8.8
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Frame = -1
Query: 212 SEPFLNLQE----TRVYHANVNSQVFKVPFENSAGPFICHQTRFHMDRKPVWDFDF 57
++P L L E TR+ AN +S +K+PF+ + + T F + PV+++ F
Sbjct: 264 TQPILELDEYGKVTRINFANSHSYTWKLPFDQMEEFYAAYITFFQYVKNPVYEYCF 319
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 583,758,485
Number of Sequences: 1657284
Number of extensions: 11404257
Number of successful extensions: 27087
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 26338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27035
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41488046300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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