Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_F13
(593 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 25 0.74
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 3.9
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 22 5.2
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 21 6.9
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 21 9.1
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 9.1
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 9.1
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 9.1
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 9.1
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 9.1
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 9.1
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 9.1
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 9.1
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 9.1
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 9.1
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 24.6 bits (51), Expect = 0.74
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 242 CPHGGKLLFGSEPFLN 195
CP +LF S PFLN
Sbjct: 383 CPESDSILFVSSPFLN 398
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 22.2 bits (45), Expect = 3.9
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +2
Query: 14 VKQSPNMKQICSKSESQNPRRAYGPCE 94
+ S + KS S +PR GPC+
Sbjct: 868 IADSQQPLNLSKKSPSPSPRPLVGPCK 894
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 21.8 bits (44), Expect = 5.2
Identities = 7/19 (36%), Positives = 10/19 (52%)
Frame = +3
Query: 264 MIKGVTKGFQYKMRAVYAH 320
M++G+ G QY Y H
Sbjct: 740 MLRGIASGMQYLAEMNYVH 758
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 21.4 bits (43), Expect = 6.9
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +3
Query: 237 RTVCSHVENMIKGV 278
R VC +EN I+G+
Sbjct: 477 RAVCGRIENTIQGL 490
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 21.0 bits (42), Expect = 9.1
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +1
Query: 343 LRVIQLLRYVTSW 381
LR+ +L+RYV+ W
Sbjct: 220 LRLSRLVRYVSQW 232
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.0 bits (42), Expect = 9.1
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +1
Query: 343 LRVIQLLRYVTSW 381
LR+ +L+RYV+ W
Sbjct: 220 LRLSRLVRYVSQW 232
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 9.1
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 31 HEANL*QIRKSKSQTGLRS 87
H+ Q R S+TGLRS
Sbjct: 11 HDERFRQSRSEDSETGLRS 29
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 9.1
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 31 HEANL*QIRKSKSQTGLRS 87
H+ Q R S+TGLRS
Sbjct: 11 HDERFRQSRSEDSETGLRS 29
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 9.1
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 31 HEANL*QIRKSKSQTGLRS 87
H+ Q R S+TGLRS
Sbjct: 11 HDERFRQSRSEDSETGLRS 29
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 9.1
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 31 HEANL*QIRKSKSQTGLRS 87
H+ Q R S+TGLRS
Sbjct: 11 HDERFRQSRSEDSETGLRS 29
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 9.1
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 31 HEANL*QIRKSKSQTGLRS 87
H+ Q R S+TGLRS
Sbjct: 11 HDERFRQSRSEDSETGLRS 29
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 9.1
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 31 HEANL*QIRKSKSQTGLRS 87
H+ Q R S+TGLRS
Sbjct: 11 HDERFRQSRSEDSETGLRS 29
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.0 bits (42), Expect = 9.1
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 31 HEANL*QIRKSKSQTGLRS 87
H+ Q R S+TGLRS
Sbjct: 11 HDERFRQSRSEDSETGLRS 29
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.0 bits (42), Expect = 9.1
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 31 HEANL*QIRKSKSQTGLRS 87
H+ Q R S+TGLRS
Sbjct: 11 HDERFRQSRSEDSETGLRS 29
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.0 bits (42), Expect = 9.1
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +1
Query: 343 LRVIQLLRYVTSW 381
LR+ +L+RYV+ W
Sbjct: 220 LRLSRLVRYVSQW 232
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,719
Number of Sequences: 438
Number of extensions: 2910
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17359926
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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