Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_F09
(617 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 25 0.45
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 25 0.45
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 25 0.45
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 23 3.2
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 22 5.5
X91509-1|CAA62809.1| 103|Apis mellifera histone H4 protein. 21 7.3
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 21 7.3
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 21 7.3
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 21 7.3
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 9.6
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 21 9.6
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 21 9.6
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 25.4 bits (53), Expect = 0.45
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 4 FYGLPVGHARRMPQAAKMGAYRY 72
F+GLPVG +P + YRY
Sbjct: 262 FFGLPVGVTAAIPTSENPADYRY 284
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 25.4 bits (53), Expect = 0.45
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 4 FYGLPVGHARRMPQAAKMGAYRY 72
F+GLPVG +P + YRY
Sbjct: 262 FFGLPVGVTAAIPTSENPADYRY 284
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 25.4 bits (53), Expect = 0.45
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 4 FYGLPVGHARRMPQAAKMGAYRY 72
F+GLPVG +P + YRY
Sbjct: 262 FFGLPVGVTAAIPTSENPADYRY 284
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 22.6 bits (46), Expect = 3.2
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +2
Query: 8 TVYLWDTRDVCHRLLRW 58
T+Y +D RD C +W
Sbjct: 402 TIYKYDVRDGCRTPFQW 418
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.8 bits (44), Expect = 5.5
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +2
Query: 35 VCHRLLRWVPTDI 73
VCH + W+PT +
Sbjct: 807 VCHNGMNWMPTHL 819
>X91509-1|CAA62809.1| 103|Apis mellifera histone H4 protein.
Length = 103
Score = 21.4 bits (43), Expect = 7.3
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +1
Query: 544 LTSAGRSSRGLGKG 585
+T G+ +GLGKG
Sbjct: 1 MTGRGKGGKGLGKG 14
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 21.4 bits (43), Expect = 7.3
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +1
Query: 547 TSAGRSSRGLGKGHXYSQTKGR 612
T + RG G+GH ++GR
Sbjct: 73 TDIEETGRGKGRGHGKGGSRGR 94
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 21.4 bits (43), Expect = 7.3
Identities = 7/20 (35%), Positives = 10/20 (50%)
Frame = -2
Query: 205 VFGLCPALWAWERGAYESTD 146
+ +C LW W R Y T+
Sbjct: 51 ILPVCNGLWRWIRLTYGQTN 70
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 21.4 bits (43), Expect = 7.3
Identities = 7/20 (35%), Positives = 10/20 (50%)
Frame = -2
Query: 205 VFGLCPALWAWERGAYESTD 146
+ +C LW W R Y T+
Sbjct: 89 ILPVCNGLWRWIRLTYGQTN 108
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/34 (23%), Positives = 13/34 (38%)
Frame = +3
Query: 108 YAFFVACEGMAVPSVDSYAPRSQAHKAGQSPKTR 209
Y + + P+ P H+A + KTR
Sbjct: 1213 YTVYTKADNAEEPTSQKVPPNQLTHEASELDKTR 1246
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 21.0 bits (42), Expect = 9.6
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = -2
Query: 199 GLCPALWAWERGAY 158
GLCP++ ++RG +
Sbjct: 357 GLCPSMANYDRGVF 370
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 21.0 bits (42), Expect = 9.6
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = -2
Query: 199 GLCPALWAWERGAY 158
GLCP++ ++RG +
Sbjct: 447 GLCPSMANYDRGVF 460
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,583
Number of Sequences: 438
Number of extensions: 3724
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -