Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_F05
         (432 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    23   0.94 
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    23   1.6  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    22   2.9  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   5.0  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   5.0  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   6.6  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    20   8.8  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    20   8.8  

>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 23.4 bits (48), Expect = 0.94
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 103 TNCARCVPKDKAIKKFVIRNI 165
           T+CA+C  K K   K VI+++
Sbjct: 72  TSCAKCTDKQKQGAKTVIQHL 92


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +1

Query: 103 TNCARCVPKDKAIKKFVIRNIV 168
           T+C++C  K K    F++R ++
Sbjct: 75  TDCSKCSEKQKEGSDFIMRYLI 96


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = +1

Query: 37  LAKRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIV 168
           L K R     K  +  +     T+CA+C  K KA  + V+ +++
Sbjct: 46  LDKGRCTPEGKKLKSTIPEALSTDCAKCNEKVKANVRKVLHHLI 89


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +1

Query: 133 KAIKKFVIRNIVXAAAVRDINDASVYPMFQLPKLYAKLHY 252
           K++  FVI  +  A  VR++ +  V    Q  +  + LHY
Sbjct: 226 KSVDLFVIFPLTKAEKVRNLKEDEVTFSVQKIQELSHLHY 265


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 5.0
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +1

Query: 133 KAIKKFVIRNIVXAAAVRDINDASVYPMFQLPKLYAKLHY 252
           K++  FVI  +  A  VR++ +  V    Q  +  + LHY
Sbjct: 182 KSVDLFVIFPLTKAEKVRNLKEDEVTFSVQKIQELSHLHY 221


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +1

Query: 103 TNCARCVPKDK 135
           TNCA+C  K +
Sbjct: 70  TNCAKCTEKQR 80


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 109 CARCVPKDKAIKKFVIRNIV 168
           CA+C  K K   + VIR+++
Sbjct: 71  CAKCNEKHKEGVRKVIRHLI 90


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 20.2 bits (40), Expect = 8.8
 Identities = 6/22 (27%), Positives = 14/22 (63%)
 Frame = +1

Query: 103 TNCARCVPKDKAIKKFVIRNIV 168
           T+C++C  + K   + +IR ++
Sbjct: 71  TSCSKCSQRQKDGSRTIIRYLI 92


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,692
Number of Sequences: 336
Number of extensions: 1419
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9565283
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)