BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_F05
(432 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69654-1|CAA49345.1| 115|Homo sapiens ribosomal protein S26 pro... 167 2e-41
U41448-1|AAC26987.1| 115|Homo sapiens ribosomal protein S26 pro... 167 2e-41
BC105798-1|AAI05799.1| 115|Homo sapiens ribosomal protein S26 p... 167 2e-41
BC105276-1|AAI05277.1| 115|Homo sapiens ribosomal protein S26 p... 167 2e-41
BC070220-1|AAH70220.1| 115|Homo sapiens ribosomal protein S26 p... 167 2e-41
BC015832-1|AAH15832.1| 115|Homo sapiens ribosomal protein S26 p... 167 2e-41
BC002604-1|AAH02604.1| 115|Homo sapiens ribosomal protein S26 p... 167 2e-41
X77770-1|CAA54808.1| 115|Homo sapiens ribosomal protein S26 pro... 165 6e-41
AL136526-7|CAI39559.1| 115|Homo sapiens protein ( for propionyl... 165 8e-41
AC073072-2|AAS07540.1| 115|Homo sapiens unknown protein. 156 3e-38
AL929401-1|CAI40435.1| 115|Homo sapiens ribosomal protein S26-l... 153 2e-37
AB007161-1|BAA25824.1| 45|Homo sapiens ribosomal protein S26 p... 67 2e-11
AB007160-1|BAA25823.1| 23|Homo sapiens ribosomal protein S26 p... 39 0.008
X79236-1|CAA55818.1| 20|Homo sapiens ribosomal protein S26 pro... 32 0.73
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 1.7
U12767-1|AAB02581.1| 587|Homo sapiens mitogen induced nuclear o... 31 1.7
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 1.7
D85242-1|BAA31221.1| 143|Homo sapiens NOR-1 3'-variant protein. 31 1.7
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 1.7
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 1.7
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 1.7
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 1.7
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 1.7
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 1.7
BC067905-1|AAH67905.1| 246|Homo sapiens monocyte to macrophage ... 31 2.2
BC037881-1|AAH37881.2| 270|Homo sapiens MMD2 protein protein. 31 2.2
AY424288-1|AAR08376.1| 246|Homo sapiens progestin and adipoQ re... 31 2.2
BC040275-1|AAH40275.1| 1181|Homo sapiens RASGRF1 protein protein. 29 5.1
L26584-1|AAA58417.1| 1275|Homo sapiens CDC25 protein. 29 6.8
BC126112-1|AAI26113.1| 1237|Homo sapiens Ras protein-specific gu... 29 9.0
AF181250-1|AAD55268.1| 1237|Homo sapiens Ras guanine nucleotide ... 29 9.0
AF023130-1|AAB80953.1| 1237|Homo sapiens Ras-GRF2 protein. 29 9.0
>X69654-1|CAA49345.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 167 bits (405), Expect = 2e-41
Identities = 76/95 (80%), Positives = 84/95 (88%)
Frame = +1
Query: 43 KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQ 222
KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIV AAAVRDI++ASV+ +
Sbjct: 4 KRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYV 63
Query: 223 LPKLYAKLHYCVSCAIHSKVVRNRSXKDRRIRTPP 327
LPKLY KLHYCVSCAIHSKVVRNRS + R+ RTPP
Sbjct: 64 LPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP 98
>U41448-1|AAC26987.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 167 bits (405), Expect = 2e-41
Identities = 76/95 (80%), Positives = 84/95 (88%)
Frame = +1
Query: 43 KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQ 222
KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIV AAAVRDI++ASV+ +
Sbjct: 4 KRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYV 63
Query: 223 LPKLYAKLHYCVSCAIHSKVVRNRSXKDRRIRTPP 327
LPKLY KLHYCVSCAIHSKVVRNRS + R+ RTPP
Sbjct: 64 LPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP 98
>BC105798-1|AAI05799.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 167 bits (405), Expect = 2e-41
Identities = 76/95 (80%), Positives = 84/95 (88%)
Frame = +1
Query: 43 KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQ 222
KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIV AAAVRDI++ASV+ +
Sbjct: 4 KRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYV 63
Query: 223 LPKLYAKLHYCVSCAIHSKVVRNRSXKDRRIRTPP 327
LPKLY KLHYCVSCAIHSKVVRNRS + R+ RTPP
Sbjct: 64 LPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP 98
>BC105276-1|AAI05277.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 167 bits (405), Expect = 2e-41
Identities = 76/95 (80%), Positives = 84/95 (88%)
Frame = +1
Query: 43 KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQ 222
KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIV AAAVRDI++ASV+ +
Sbjct: 4 KRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYV 63
Query: 223 LPKLYAKLHYCVSCAIHSKVVRNRSXKDRRIRTPP 327
LPKLY KLHYCVSCAIHSKVVRNRS + R+ RTPP
Sbjct: 64 LPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP 98
>BC070220-1|AAH70220.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 167 bits (405), Expect = 2e-41
Identities = 76/95 (80%), Positives = 84/95 (88%)
Frame = +1
Query: 43 KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQ 222
KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIV AAAVRDI++ASV+ +
Sbjct: 4 KRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYV 63
Query: 223 LPKLYAKLHYCVSCAIHSKVVRNRSXKDRRIRTPP 327
LPKLY KLHYCVSCAIHSKVVRNRS + R+ RTPP
Sbjct: 64 LPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP 98
>BC015832-1|AAH15832.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 167 bits (405), Expect = 2e-41
Identities = 76/95 (80%), Positives = 84/95 (88%)
Frame = +1
Query: 43 KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQ 222
KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIV AAAVRDI++ASV+ +
Sbjct: 4 KRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYV 63
Query: 223 LPKLYAKLHYCVSCAIHSKVVRNRSXKDRRIRTPP 327
LPKLY KLHYCVSCAIHSKVVRNRS + R+ RTPP
Sbjct: 64 LPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP 98
>BC002604-1|AAH02604.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 167 bits (405), Expect = 2e-41
Identities = 76/95 (80%), Positives = 84/95 (88%)
Frame = +1
Query: 43 KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQ 222
KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIV AAAVRDI++ASV+ +
Sbjct: 4 KRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYV 63
Query: 223 LPKLYAKLHYCVSCAIHSKVVRNRSXKDRRIRTPP 327
LPKLY KLHYCVSCAIHSKVVRNRS + R+ RTPP
Sbjct: 64 LPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP 98
>X77770-1|CAA54808.1| 115|Homo sapiens ribosomal protein S26
protein.
Length = 115
Score = 165 bits (401), Expect = 6e-41
Identities = 75/95 (78%), Positives = 83/95 (87%)
Frame = +1
Query: 43 KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQ 222
KRRN GRAK GRGHV+ +RCTNCARCVPKDKAIKKFVIRNIV AAAVRDI++ASV+ +
Sbjct: 4 KRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFDAYV 63
Query: 223 LPKLYAKLHYCVSCAIHSKVVRNRSXKDRRIRTPP 327
LPKLY KLHYCVSC IHSKVVRNRS + R+ RTPP
Sbjct: 64 LPKLYVKLHYCVSCVIHSKVVRNRSREARKDRTPP 98
>AL136526-7|CAI39559.1| 115|Homo sapiens protein ( for propionyl
Coenzyme A ).).
Length = 115
Score = 165 bits (400), Expect = 8e-41
Identities = 75/95 (78%), Positives = 83/95 (87%)
Frame = +1
Query: 43 KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQ 222
KRRN GRAK GRGHV+ +RCTNCARCVPKD AIKKFVIRNIV AAAVRDI++ASV+ +
Sbjct: 4 KRRNNGRAKKGRGHVQPIRCTNCARCVPKDNAIKKFVIRNIVEAAAVRDISEASVFDAYV 63
Query: 223 LPKLYAKLHYCVSCAIHSKVVRNRSXKDRRIRTPP 327
LPKLY KLHYCVSCAIHSKVVRNRS + R+ RTPP
Sbjct: 64 LPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP 98
>AC073072-2|AAS07540.1| 115|Homo sapiens unknown protein.
Length = 115
Score = 156 bits (378), Expect = 3e-38
Identities = 72/95 (75%), Positives = 80/95 (84%)
Frame = +1
Query: 43 KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQ 222
KRRN RAK GRGHV+ +RCTNCARCVPKD AIKKFVIRNIV AAAVRDI++ASV+ +
Sbjct: 4 KRRNNVRAKKGRGHVQPIRCTNCARCVPKDNAIKKFVIRNIVEAAAVRDISEASVFDAYV 63
Query: 223 LPKLYAKLHYCVSCAIHSKVVRNRSXKDRRIRTPP 327
LPKL KLHYCVSC IHSKVVRNRS + R+ RTPP
Sbjct: 64 LPKLCVKLHYCVSCVIHSKVVRNRSREARKDRTPP 98
>AL929401-1|CAI40435.1| 115|Homo sapiens ribosomal protein S26-like
1 protein.
Length = 115
Score = 153 bits (372), Expect = 2e-37
Identities = 70/95 (73%), Positives = 78/95 (82%)
Frame = +1
Query: 43 KRRNGGRAKHGRGHVKAVRCTNCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQ 222
KRRN AK GRGHV+ +RCTNC RCVP DKAIKKFVIRNIV AAAVRDI++ SV+ +
Sbjct: 4 KRRNNSHAKKGRGHVQPIRCTNCVRCVPTDKAIKKFVIRNIVEAAAVRDISEVSVFDAYV 63
Query: 223 LPKLYAKLHYCVSCAIHSKVVRNRSXKDRRIRTPP 327
LPKLY KLHYCVSCAIHSKVVRNRS + + RTPP
Sbjct: 64 LPKLYVKLHYCVSCAIHSKVVRNRSREACKDRTPP 98
>AB007161-1|BAA25824.1| 45|Homo sapiens ribosomal protein S26
protein.
Length = 45
Score = 67.3 bits (157), Expect = 2e-11
Identities = 29/37 (78%), Positives = 32/37 (86%)
Frame = +1
Query: 217 FQLPKLYAKLHYCVSCAIHSKVVRNRSXKDRRIRTPP 327
+ LPKLY KLHYCVSCAIHSKVVRNRS + R+ RTPP
Sbjct: 1 YVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPP 37
>AB007160-1|BAA25823.1| 23|Homo sapiens ribosomal protein S26
protein.
Length = 23
Score = 38.7 bits (86), Expect = 0.008
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = +1
Query: 145 KFVIRNIVXAAAVRDINDASVY 210
KFVIRNIV AAAVRDI++ASV+
Sbjct: 1 KFVIRNIVEAAAVRDISEASVF 22
>X79236-1|CAA55818.1| 20|Homo sapiens ribosomal protein S26
protein.
Length = 20
Score = 32.3 bits (70), Expect = 0.73
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +1
Query: 43 KRRNGGRAKHGRGHVK 90
KRRN GRAK GRGHV+
Sbjct: 4 KRRNNGRAKKGRGHVQ 19
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 31.1 bits (67), Expect = 1.7
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 235 YAKLHYCVSCAIHSKVVRNRSXKDRRIRTP--PKSNFPRDMSRP 360
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389
>U12767-1|AAB02581.1| 587|Homo sapiens mitogen induced nuclear
orphan receptor protein.
Length = 587
Score = 31.1 bits (67), Expect = 1.7
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 235 YAKLHYCVSCAIHSKVVRNRSXKDRRIRTP--PKSNFPRDMSRP 360
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 307 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 350
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 31.1 bits (67), Expect = 1.7
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 235 YAKLHYCVSCAIHSKVVRNRSXKDRRIRTP--PKSNFPRDMSRP 360
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 404 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 447
>D85242-1|BAA31221.1| 143|Homo sapiens NOR-1 3'-variant protein.
Length = 143
Score = 31.1 bits (67), Expect = 1.7
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 235 YAKLHYCVSCAIHSKVVRNRSXKDRRIRTP--PKSNFPRDMSRP 360
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 46 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 89
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 31.1 bits (67), Expect = 1.7
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 235 YAKLHYCVSCAIHSKVVRNRSXKDRRIRTP--PKSNFPRDMSRP 360
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 31.1 bits (67), Expect = 1.7
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 235 YAKLHYCVSCAIHSKVVRNRSXKDRRIRTP--PKSNFPRDMSRP 360
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.1 bits (67), Expect = 1.7
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 235 YAKLHYCVSCAIHSKVVRNRSXKDRRIRTP--PKSNFPRDMSRP 360
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.1 bits (67), Expect = 1.7
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 235 YAKLHYCVSCAIHSKVVRNRSXKDRRIRTP--PKSNFPRDMSRP 360
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 357 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 400
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.1 bits (67), Expect = 1.7
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 235 YAKLHYCVSCAIHSKVVRNRSXKDRRIRTP--PKSNFPRDMSRP 360
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.1 bits (67), Expect = 1.7
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 235 YAKLHYCVSCAIHSKVVRNRSXKDRRIRTP--PKSNFPRDMSRP 360
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 357 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 400
>BC067905-1|AAH67905.1| 246|Homo sapiens monocyte to macrophage
differentiation-associated 2 protein.
Length = 246
Score = 30.7 bits (66), Expect = 2.2
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = -1
Query: 162 VPNHELFDSLVLWHAPRAVCASHSFNVTTSMLGASSITALSE 37
VP H+ + HA A CA+H+F + S+LG+S++ LS+
Sbjct: 22 VPAHKRYQPTEYEHA--ANCATHAFWIIPSILGSSNLYFLSD 61
>BC037881-1|AAH37881.2| 270|Homo sapiens MMD2 protein protein.
Length = 270
Score = 30.7 bits (66), Expect = 2.2
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = -1
Query: 162 VPNHELFDSLVLWHAPRAVCASHSFNVTTSMLGASSITALSE 37
VP H+ + HA A CA+H+F + S+LG+S++ LS+
Sbjct: 22 VPAHKRYQPTEYEHA--ANCATHAFWIIPSILGSSNLYFLSD 61
>AY424288-1|AAR08376.1| 246|Homo sapiens progestin and adipoQ
receptor family member X protein.
Length = 246
Score = 30.7 bits (66), Expect = 2.2
Identities = 16/42 (38%), Positives = 26/42 (61%)
Frame = -1
Query: 162 VPNHELFDSLVLWHAPRAVCASHSFNVTTSMLGASSITALSE 37
VP H+ + HA A CA+H+F + S+LG+S++ LS+
Sbjct: 22 VPAHKRYQPTEYEHA--ANCATHAFWIIPSILGSSNLYFLSD 61
>BC040275-1|AAH40275.1| 1181|Homo sapiens RASGRF1 protein protein.
Length = 1181
Score = 29.5 bits (63), Expect = 5.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 184 RDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRN 291
R + YPMFQ+P+ LH ++ H V RN
Sbjct: 372 RTLETFLTYPMFQIPRYILTLHELLAHTPHEHVERN 407
>L26584-1|AAA58417.1| 1275|Homo sapiens CDC25 protein.
Length = 1275
Score = 29.1 bits (62), Expect = 6.8
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 184 RDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRN 291
R + YPMFQ+P+ LH ++ H V RN
Sbjct: 372 RTLETFLTYPMFQIPRYILTLHDVLAHTPHEHVERN 407
>BC126112-1|AAI26113.1| 1237|Homo sapiens Ras protein-specific
guanine nucleotide-releasing factor 2 protein.
Length = 1237
Score = 28.7 bits (61), Expect = 9.0
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +1
Query: 106 NCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVV 285
NC + DK +K++ A R + YPMFQ+P+ LH ++ H V
Sbjct: 352 NCKQNRDFDKLLKQYEANP---ACEGRMLETFLTYPMFQIPRYIITLHELLAHTPHEHVE 408
Query: 286 R 288
R
Sbjct: 409 R 409
>AF181250-1|AAD55268.1| 1237|Homo sapiens Ras guanine nucleotide
exchange factor 2 protein.
Length = 1237
Score = 28.7 bits (61), Expect = 9.0
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +1
Query: 106 NCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVV 285
NC + DK +K++ A R + YPMFQ+P+ LH ++ H V
Sbjct: 352 NCKQNRDFDKLLKQYEANP---ACEGRMLETFLTYPMFQIPRYIITLHELLAHTPHEHVE 408
Query: 286 R 288
R
Sbjct: 409 R 409
>AF023130-1|AAB80953.1| 1237|Homo sapiens Ras-GRF2 protein.
Length = 1237
Score = 28.7 bits (61), Expect = 9.0
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +1
Query: 106 NCARCVPKDKAIKKFVIRNIVXAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVV 285
NC + DK +K++ A R + YPMFQ+P+ LH ++ H V
Sbjct: 352 NCKQNRDFDKLLKQYEANP---ACEGRMLETFLTYPMFQIPRYIITLHELLAHTPHEHVE 408
Query: 286 R 288
R
Sbjct: 409 R 409
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,559,118
Number of Sequences: 237096
Number of extensions: 921432
Number of successful extensions: 1865
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1865
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3430805640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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