Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_F01
(453 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P55828 Cluster: 40S ribosomal protein S20; n=28; Eukary... 192 2e-48
UniRef50_P60866 Cluster: 40S ribosomal protein S20; n=127; cellu... 182 3e-45
UniRef50_O74893 Cluster: 40S ribosomal protein S20; n=15; Fungi/... 171 8e-42
UniRef50_UPI00015B60B9 Cluster: PREDICTED: similar to ENSANGP000... 139 3e-32
UniRef50_Q86H15 Cluster: 40S rRNA protein-like protein; n=10; Bi... 137 9e-32
UniRef50_UPI0000498481 Cluster: 40S ribosomal protein S20; n=2; ... 126 3e-28
UniRef50_Q22DC6 Cluster: Ribosomal protein S10 containing protei... 124 9e-28
UniRef50_Q4Q8G4 Cluster: Ribosomal protein s20, putative; n=4; T... 122 4e-27
UniRef50_A2EK65 Cluster: Ribosomal protein S10p/S20e, putative; ... 111 5e-24
UniRef50_Q98S21 Cluster: 40S ribosomal protein S20; n=1; Guillar... 108 5e-23
UniRef50_A0BD80 Cluster: Chromosome undetermined scaffold_10, wh... 97 1e-19
UniRef50_Q5M8F0 Cluster: Putative uncharacterized protein; n=2; ... 84 2e-15
UniRef50_A0RUM5 Cluster: Ribosomal protein S10; n=3; Thermoprote... 83 4e-15
UniRef50_O29324 Cluster: 30S ribosomal protein S10P; n=35; Archa... 81 1e-14
UniRef50_A3H8H3 Cluster: Ribosomal protein S10; n=2; Thermoprote... 77 2e-13
UniRef50_UPI00015BAA87 Cluster: SSU ribosomal protein S10P; n=1;... 74 2e-12
UniRef50_P17199 Cluster: 30S ribosomal protein S10P; n=15; Archa... 71 9e-12
UniRef50_Q74MI5 Cluster: 30S ribosomal protein S10P; n=1; Nanoar... 64 2e-09
UniRef50_Q9PLX0 Cluster: 30S ribosomal protein S10; n=15; Campyl... 60 3e-08
UniRef50_Q7R349 Cluster: GLP_554_44441_44061; n=1; Giardia lambl... 58 7e-08
UniRef50_A4RTZ9 Cluster: Plastid ribosomal protein S10 small rib... 55 8e-07
UniRef50_Q6MJ14 Cluster: 30S ribosomal protein S10; n=14; Bacter... 55 8e-07
UniRef50_Q4UMT0 Cluster: 30S ribosomal protein S10; n=23; Bacter... 54 2e-06
UniRef50_Q6MER9 Cluster: 30S ribosomal protein S10; n=7; Bacteri... 53 3e-06
UniRef50_Q7VQE9 Cluster: 30S ribosomal protein S10; n=10; Proteo... 52 8e-06
UniRef50_Q9LK61 Cluster: 30S ribosomal protein S10, chloroplast ... 51 1e-05
UniRef50_Q2GEE0 Cluster: 30S ribosomal protein S10; n=5; Proteob... 50 3e-05
UniRef50_Q6F7R1 Cluster: 30S ribosomal protein S10; n=23; Bacter... 49 4e-05
UniRef50_Q9TLV9 Cluster: Chloroplast 30S ribosomal protein S10; ... 48 7e-05
UniRef50_UPI0000D99BC8 Cluster: PREDICTED: similar to 40S riboso... 48 1e-04
UniRef50_Q88XY7 Cluster: 30S ribosomal protein S10; n=18; Bacter... 46 3e-04
UniRef50_Q8SQX6 Cluster: 40S RIBOSOMAL PROTEIN S20; n=1; Encepha... 46 4e-04
UniRef50_Q7U4D0 Cluster: 30S ribosomal protein S10; n=136; cellu... 45 7e-04
UniRef50_P66331 Cluster: 30S ribosomal protein S10; n=234; Bacte... 44 0.001
UniRef50_O21246 Cluster: Mitochondrial ribosomal protein S10; n=... 42 0.008
UniRef50_Q8EUB2 Cluster: 30S ribosomal protein S10; n=4; Mycopla... 41 0.014
UniRef50_Q73H86 Cluster: 30S ribosomal protein S10; n=2; Wolbach... 40 0.019
UniRef50_Q8A475 Cluster: 30S ribosomal protein S10; n=247; cellu... 38 0.13
UniRef50_Q6YR19 Cluster: 30S ribosomal protein S10; n=5; Bacteri... 36 0.31
UniRef50_A0T0K7 Cluster: Chloroplast 30S ribosomal protein S10; ... 35 0.71
UniRef50_Q5V488 Cluster: Ribosomal protein S10p; n=2; Halobacter... 33 2.2
UniRef50_A0T870 Cluster: Putative uncharacterized protein; n=2; ... 33 2.9
UniRef50_Q9YMJ9 Cluster: LdOrf-128 peptide; n=1; Lymantria dispa... 32 5.0
UniRef50_Q89ES3 Cluster: FliF protein; n=7; Rhizobiales|Rep: Fli... 32 6.6
UniRef50_A2U5E9 Cluster: Transcriptional regulator, MarR family ... 31 8.7
UniRef50_A7QMI1 Cluster: Chromosome chr19 scaffold_126, whole ge... 31 8.7
UniRef50_Q4QJ47 Cluster: Putative uncharacterized protein; n=3; ... 31 8.7
UniRef50_P75581 Cluster: 30S ribosomal protein S10; n=2; Mycopla... 31 8.7
UniRef50_O50185 Cluster: 30S ribosomal protein S10; n=5; Mycopla... 31 8.7
>UniRef50_P55828 Cluster: 40S ribosomal protein S20; n=28;
Eukaryota|Rep: 40S ribosomal protein S20 - Drosophila
melanogaster (Fruit fly)
Length = 120
Score = 192 bits (469), Expect = 2e-48
Identities = 92/109 (84%), Positives = 97/109 (88%), Gaps = 1/109 (0%)
Frame = +2
Query: 128 KDIEKPQA-EVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 304
KDIEKP + + +HRIRITLTSRNVRSLE VC DLINGAK Q LRVKGPVRMPTK LRI
Sbjct: 6 KDIEKPHVGDSASVHRIRITLTSRNVRSLENVCRDLINGAKNQNLRVKGPVRMPTKTLRI 65
Query: 305 TTRKTPCGEGSKTWDRFQMRIHXRVIDLHSPSEIVKQITSINIEPGVXV 451
TTRKTPCGEGSKTWDRFQMRIH R+IDLHSPSEIVK+ITSINIEPGV V
Sbjct: 66 TTRKTPCGEGSKTWDRFQMRIHKRIIDLHSPSEIVKKITSINIEPGVEV 114
>UniRef50_P60866 Cluster: 40S ribosomal protein S20; n=127; cellular
organisms|Rep: 40S ribosomal protein S20 - Homo sapiens
(Human)
Length = 119
Score = 182 bits (443), Expect = 3e-45
Identities = 89/109 (81%), Positives = 95/109 (87%), Gaps = 1/109 (0%)
Frame = +2
Query: 128 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 304
KD K E IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63
Query: 305 TTRKTPCGEGSKTWDRFQMRIHXRVIDLHSPSEIVKQITSINIEPGVXV 451
TTRKTPCGEGSKTWDRFQMRIH R+IDLHSPSEIVKQITSI+IEPGV V
Sbjct: 64 TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEV 112
>UniRef50_O74893 Cluster: 40S ribosomal protein S20; n=15;
Fungi/Metazoa group|Rep: 40S ribosomal protein S20 -
Schizosaccharomyces pombe (Fission yeast)
Length = 118
Score = 171 bits (415), Expect = 8e-42
Identities = 80/105 (76%), Positives = 94/105 (89%)
Frame = +2
Query: 137 EKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRK 316
+K Q S +HRIRITLTSRNVR+LEKVC+DL+N AK ++LRVKGPVR+PTKIL+ITTRK
Sbjct: 8 QKEQQIPSTVHRIRITLTSRNVRNLEKVCSDLVNRAKDKQLRVKGPVRLPTKILKITTRK 67
Query: 317 TPCGEGSKTWDRFQMRIHXRVIDLHSPSEIVKQITSINIEPGVXV 451
TP GEGSKTW+ ++MRIH R+IDLHSPSEIVKQITSI+IEPGV V
Sbjct: 68 TPNGEGSKTWETYEMRIHKRLIDLHSPSEIVKQITSIHIEPGVEV 112
>UniRef50_UPI00015B60B9 Cluster: PREDICTED: similar to
ENSANGP00000022492; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000022492 - Nasonia
vitripennis
Length = 483
Score = 139 bits (336), Expect = 3e-32
Identities = 65/74 (87%), Positives = 69/74 (93%)
Frame = +2
Query: 230 LINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHXRVIDLHSPSEIV 409
LI KKQKL+VKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIH RVIDL+SPSEIV
Sbjct: 403 LIQRGKKQKLKVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLYSPSEIV 462
Query: 410 KQITSINIEPGVXV 451
KQITSI++EPGV V
Sbjct: 463 KQITSISLEPGVEV 476
>UniRef50_Q86H15 Cluster: 40S rRNA protein-like protein; n=10;
Bilateria|Rep: 40S rRNA protein-like protein -
Schistosoma japonicum (Blood fluke)
Length = 121
Score = 137 bits (332), Expect = 9e-32
Identities = 67/112 (59%), Positives = 83/112 (74%)
Frame = +2
Query: 110 AAVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPT 289
AA+++ K + PQ +S +R+TLT+ +++ LEKV LI AK Q LRVKGPVRMPT
Sbjct: 2 AAMIAEKKADVPQ--LSTTKWVRVTLTAASIKPLEKVADGLIKKAKDQNLRVKGPVRMPT 59
Query: 290 KILRITTRKTPCGEGSKTWDRFQMRIHXRVIDLHSPSEIVKQITSINIEPGV 445
K+LR+TTRKTPCGEGSKTWDRFQ+RIH RVIDL S E Q+ I +EPGV
Sbjct: 60 KVLRVTTRKTPCGEGSKTWDRFQLRIHKRVIDLLSTDEATLQLKHIYLEPGV 111
>UniRef50_UPI0000498481 Cluster: 40S ribosomal protein S20; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S20 - Entamoeba histolytica HM-1:IMSS
Length = 118
Score = 126 bits (303), Expect = 3e-28
Identities = 58/106 (54%), Positives = 78/106 (73%)
Frame = +2
Query: 128 KDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRIT 307
KDI+ P I IT+TS V+++E +CA++ KK+ ++VKGPVR+PTK LRIT
Sbjct: 6 KDIKAPVTP-KVYKNITITITSTKVKAVESLCAEVKENGKKKGVQVKGPVRIPTKTLRIT 64
Query: 308 TRKTPCGEGSKTWDRFQMRIHXRVIDLHSPSEIVKQITSINIEPGV 445
TRKTPCGEGSKTWD +QMRI+ RV+ + + E VK+ITS+ +EPGV
Sbjct: 65 TRKTPCGEGSKTWDHYQMRIYKRVLSMKTTPETVKEITSLKVEPGV 110
>UniRef50_Q22DC6 Cluster: Ribosomal protein S10 containing protein;
n=5; Eukaryota|Rep: Ribosomal protein S10 containing
protein - Tetrahymena thermophila SB210
Length = 120
Score = 124 bits (299), Expect = 9e-28
Identities = 59/109 (54%), Positives = 83/109 (76%), Gaps = 1/109 (0%)
Frame = +2
Query: 128 KDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKK-QKLRVKGPVRMPTKILRI 304
K+ +K + EV + R+RITLT +N++S+EK +++++ AKK +++ VKGPVRMPTK L I
Sbjct: 5 KETKKGEEEVKKV-RVRITLTCKNLKSVEKATSEIVSRAKKTEQVEVKGPVRMPTKTLVI 63
Query: 305 TTRKTPCGEGSKTWDRFQMRIHXRVIDLHSPSEIVKQITSINIEPGVXV 451
T RK+PCGEGSKTWDRF+MRI+ R+IDL VK IT+ I+PGV +
Sbjct: 64 TVRKSPCGEGSKTWDRFEMRIYKRIIDLTCNVPDVKTITNFRIDPGVEI 112
>UniRef50_Q4Q8G4 Cluster: Ribosomal protein s20, putative; n=4;
Trypanosomatidae|Rep: Ribosomal protein s20, putative -
Leishmania major
Length = 116
Score = 122 bits (294), Expect = 4e-27
Identities = 52/105 (49%), Positives = 79/105 (75%)
Frame = +2
Query: 137 EKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRK 316
+K QA + +R+T+TSRN +++E V + L+ A+ +K+ + GPVR+PT+ L+ITTRK
Sbjct: 5 KKNQAAPAEGQTVRLTITSRNAKAVESVTSQLLTRARDEKVTIHGPVRLPTRTLKITTRK 64
Query: 317 TPCGEGSKTWDRFQMRIHXRVIDLHSPSEIVKQITSINIEPGVXV 451
TPCG G+ TWD F+++I+ R+IDLH+P+E VK+ITS +E GV V
Sbjct: 65 TPCGNGTNTWDTFELKIYKRIIDLHAPTEQVKKITSFTMESGVDV 109
>UniRef50_A2EK65 Cluster: Ribosomal protein S10p/S20e, putative;
n=3; Trichomonas vaginalis G3|Rep: Ribosomal protein
S10p/S20e, putative - Trichomonas vaginalis G3
Length = 123
Score = 111 bits (268), Expect = 5e-24
Identities = 53/116 (45%), Positives = 77/116 (66%)
Frame = +2
Query: 104 MAAAVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRM 283
MA VV D +K E P+ +IR+T+TS + +L++V +L+ KK L V+GP+ M
Sbjct: 1 MADRVVPTGDEKKEIVEDLPVQKIRLTITSSKLPNLQRVVGNLMGKLKKGNLEVRGPIPM 60
Query: 284 PTKILRITTRKTPCGEGSKTWDRFQMRIHXRVIDLHSPSEIVKQITSINIEPGVXV 451
P + LRITTR+ PCG G++T+D F++RI+ RVID +E VKQ+T I +EP V V
Sbjct: 61 PRRRLRITTRRAPCGNGTETYDHFELRIYKRVIDFQGTAEAVKQVTQIALEPDVHV 116
>UniRef50_Q98S21 Cluster: 40S ribosomal protein S20; n=1; Guillardia
theta|Rep: 40S ribosomal protein S20 - Guillardia theta
(Cryptomonas phi)
Length = 116
Score = 108 bits (260), Expect = 5e-23
Identities = 43/93 (46%), Positives = 66/93 (70%)
Frame = +2
Query: 173 IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDR 352
+RITLTS+++ SLEK C ++I K+ ++GP+R+PTK + + RK+PCGEG+ TWD+
Sbjct: 16 LRITLTSKHLISLEKACKEIIEKNKENNYHIRGPIRIPTKKINLNVRKSPCGEGTNTWDK 75
Query: 353 FQMRIHXRVIDLHSPSEIVKQITSINIEPGVXV 451
F+M+IH R+ID HS IT IN++ G+ +
Sbjct: 76 FEMKIHKRIIDFHSNKSEFNSITPINLDNGIEI 108
>UniRef50_A0BD80 Cluster: Chromosome undetermined scaffold_10, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_10,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 123
Score = 97.5 bits (232), Expect = 1e-19
Identities = 52/111 (46%), Positives = 67/111 (60%), Gaps = 6/111 (5%)
Frame = +2
Query: 137 EKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAK----KQKLRV--KGPVRMPTKIL 298
EK + +IR+ +TSR+ + LE +I + Q +V KGPVRMPTK L
Sbjct: 6 EKKVEDEQQTKKIRMIVTSRSAQDLENFTNQVIEKTRGIQRDQGAQVVFKGPVRMPTKHL 65
Query: 299 RITTRKTPCGEGSKTWDRFQMRIHXRVIDLHSPSEIVKQITSINIEPGVXV 451
++T RK+PCGEGSKTWDRF+MRIH RVID K IT+ I PG+ V
Sbjct: 66 KMTVRKSPCGEGSKTWDRFEMRIHKRVIDFQCTLPTFKDITNFKIGPGINV 116
>UniRef50_Q5M8F0 Cluster: Putative uncharacterized protein; n=2;
Tetrapoda|Rep: Putative uncharacterized protein -
Xenopus tropicalis (Western clawed frog) (Silurana
tropicalis)
Length = 82
Score = 83.8 bits (198), Expect = 2e-15
Identities = 47/82 (57%), Positives = 60/82 (73%), Gaps = 2/82 (2%)
Frame = +2
Query: 128 KDIEK-PQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 304
KD K P + IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK+ ++
Sbjct: 4 KDAGKAPVDQEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKV-QL 62
Query: 305 TTRKTPCGEGSKTWD-RFQMRI 367
+ + C + W+ +FQ RI
Sbjct: 63 ESYISQC--AAVCWESKFQHRI 82
>UniRef50_A0RUM5 Cluster: Ribosomal protein S10; n=3;
Thermoprotei|Rep: Ribosomal protein S10 - Cenarchaeum
symbiosum
Length = 102
Score = 82.6 bits (195), Expect = 4e-15
Identities = 33/90 (36%), Positives = 61/90 (67%)
Frame = +2
Query: 176 RITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRF 355
R+ LTS N+ L+ VC +++ K+ +R+KGP +P K L I TRK+PCG G++T++++
Sbjct: 6 RVKLTSINLLKLDGVCGIIMDIGKRTGVRIKGPTPLPVKKLHIATRKSPCGSGTETYEKW 65
Query: 356 QMRIHXRVIDLHSPSEIVKQITSINIEPGV 445
+MR+H R+ID+ + + ++++ + I V
Sbjct: 66 EMRMHRRIIDISADDKTIRRLIDLKIPDDV 95
>UniRef50_O29324 Cluster: 30S ribosomal protein S10P; n=35;
Archaea|Rep: 30S ribosomal protein S10P - Archaeoglobus
fulgidus
Length = 106
Score = 80.6 bits (190), Expect = 1e-14
Identities = 34/94 (36%), Positives = 58/94 (61%)
Frame = +2
Query: 170 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 349
+ RI L+ N R L+++C+ + A K + + GPV +PT+ + + RK P GEGS+TWD
Sbjct: 7 KARIKLSGLNPRELDRICSQIKEIANKTGVELSGPVPLPTRRMVVPVRKAPDGEGSETWD 66
Query: 350 RFQMRIHXRVIDLHSPSEIVKQITSINIEPGVXV 451
++MR+H R+ID+ + ++QI I + V +
Sbjct: 67 HWEMRVHKRLIDISADERALRQIMRIQVPRDVNI 100
>UniRef50_A3H8H3 Cluster: Ribosomal protein S10; n=2;
Thermoproteales|Rep: Ribosomal protein S10 - Caldivirga
maquilingensis IC-167
Length = 121
Score = 76.6 bits (180), Expect = 2e-13
Identities = 35/98 (35%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Frame = +2
Query: 161 PIHRI-RITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGS 337
P+ RI RI + N S++ + D+ AKK ++V+GP+ +PT+ L +T R+ P G+G
Sbjct: 18 PVPRIVRIRIWGTNTDSVDGLARDITGIAKKLGIKVRGPIPLPTRRLMVTVRRAPSGQGY 77
Query: 338 KTWDRFQMRIHXRVIDLHSPSEIVKQITSINIEPGVXV 451
T+D ++MRIH RV+D+ + ++Q+ + I V V
Sbjct: 78 HTYDHWEMRIHKRVVDMDADERALRQLMRLRIPEDVKV 115
>UniRef50_UPI00015BAA87 Cluster: SSU ribosomal protein S10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S10P - Ignicoccus hospitalis KIN4/I
Length = 106
Score = 73.7 bits (173), Expect = 2e-12
Identities = 34/97 (35%), Positives = 60/97 (61%)
Frame = +2
Query: 161 PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSK 340
P + RI + S +V+S+E+V + A++ + V+GPV +P K L I+T + P GEG+K
Sbjct: 3 PKNMARIKMWSTDVKSIEEVAKQIREIAERSGVEVRGPVPLPVKRLEISTLRLPHGEGTK 62
Query: 341 TWDRFQMRIHXRVIDLHSPSEIVKQITSINIEPGVXV 451
+D ++MRIH R+ID+ ++++ I I + V +
Sbjct: 63 VFDHWEMRIHKRLIDVELNDKVMRNIMRIRVPSNVYI 99
>UniRef50_P17199 Cluster: 30S ribosomal protein S10P; n=15;
Archaea|Rep: 30S ribosomal protein S10P - Sulfolobus
acidocaldarius
Length = 102
Score = 71.3 bits (167), Expect = 9e-12
Identities = 29/94 (30%), Positives = 55/94 (58%)
Frame = +2
Query: 170 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 349
+ RI L S N+ SL V + N A+K ++V GP+ +PT + + + P GEG K W+
Sbjct: 4 KARIRLWSSNIDSLNFVVNQIRNMAQKTGIQVSGPIPLPTTRMEVPVMRLPHGEGKKKWE 63
Query: 350 RFQMRIHXRVIDLHSPSEIVKQITSINIEPGVXV 451
++M++H R+ID+ + +++Q+ + + V +
Sbjct: 64 HWEMKVHKRIIDIAADERVMRQLMRVRVPDDVYI 97
>UniRef50_Q74MI5 Cluster: 30S ribosomal protein S10P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S10P -
Nanoarchaeum equitans
Length = 109
Score = 63.7 bits (148), Expect = 2e-09
Identities = 27/80 (33%), Positives = 48/80 (60%)
Frame = +2
Query: 173 IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDR 352
+RI + S ++ L +V + K+ ++++GP+ +PTKILR+ + G+K WD
Sbjct: 4 LRIKIYSTDLEELNRVVEKIKEIVKQTGVKMRGPIPLPTKILRVPVLRITGHRGTKIWDT 63
Query: 353 FQMRIHXRVIDLHSPSEIVK 412
+QMRIH R+ID+ + +K
Sbjct: 64 YQMRIHRRIIDIATDDRTIK 83
>UniRef50_Q9PLX0 Cluster: 30S ribosomal protein S10; n=15;
Campylobacter|Rep: 30S ribosomal protein S10 -
Campylobacter jejuni
Length = 103
Score = 59.7 bits (138), Expect = 3e-08
Identities = 30/97 (30%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Frame = +2
Query: 164 IHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKT 343
+ RIR+ L + + R L++ A ++ K+ ++GP+ MPTKI R T K+P +
Sbjct: 1 MERIRLKLKAYDHRVLDRTVAAIVEAVKRTGADIRGPIPMPTKIKRYTVLKSP-HINKDS 59
Query: 344 WDRFQMRIHXRVIDLHSPS-EIVKQITSINIEPGVXV 451
++F++RIH R++D+ + + + V +T +++ P V V
Sbjct: 60 REQFEIRIHARMLDIVAATPDTVDSLTKLDLAPEVSV 96
>UniRef50_Q7R349 Cluster: GLP_554_44441_44061; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_554_44441_44061 - Giardia lamblia
ATCC 50803
Length = 126
Score = 58.4 bits (135), Expect = 7e-08
Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Frame = +2
Query: 179 ITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQ 358
I + ++++ +E+ ++ + + GP R P + L ITTRK+PCGEG+ TW RF+
Sbjct: 27 IIVVGKDLKLVERYVKSIVKEGRA--FGISGPCRAPVRRLTITTRKSPCGEGTNTWHRFE 84
Query: 359 MRIHXRVIDLHSPSEIVKQITSINIE-PGVXV 451
+R++ R + + I S + PG+ V
Sbjct: 85 LRMYKRTFWVTCGGNDISTILSKTVVIPGIQV 116
>UniRef50_A4RTZ9 Cluster: Plastid ribosomal protein S10 small
ribosomal subunit; n=1; Ostreococcus lucimarinus
CCE9901|Rep: Plastid ribosomal protein S10 small
ribosomal subunit - Ostreococcus lucimarinus CCE9901
Length = 136
Score = 54.8 bits (126), Expect = 8e-07
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Frame = +2
Query: 146 QAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPC 325
QA +IRI L S ++ C ++ AK + RV GPV +PTK ++P
Sbjct: 31 QAAAVQASKIRIRLRSFETNHMQSACDKILEAAKATEARVSGPVPLPTKRRIFCVLRSP- 89
Query: 326 GEGSKTWDRFQMRIHXRVIDLHSP-SEIVKQITSINIEPGVXV 451
+ + F+ R H R+ID+H P ++ + + ++ + GV V
Sbjct: 90 HVNKDSREHFETRTHHRLIDVHQPTAQTIDALMALELPSGVDV 132
>UniRef50_Q6MJ14 Cluster: 30S ribosomal protein S10; n=14;
Bacteria|Rep: 30S ribosomal protein S10 - Bdellovibrio
bacteriovorus
Length = 105
Score = 54.8 bits (126), Expect = 8e-07
Identities = 27/95 (28%), Positives = 59/95 (62%), Gaps = 1/95 (1%)
Frame = +2
Query: 170 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 349
+IRI L + + + L++ +++ A++ +V GP+ +PT+I R T ++P + K+ +
Sbjct: 5 KIRIRLKAFDHKLLDQSTKEIVETARRTGAKVAGPIPLPTRINRYTVLRSPHVD-KKSRE 63
Query: 350 RFQMRIHXRVIDLHSPS-EIVKQITSINIEPGVXV 451
+F++R H R++D+ P+ + V Q+ +++ GV V
Sbjct: 64 QFEVRTHKRMLDILEPTQQTVDQLMKLDLSAGVDV 98
>UniRef50_Q4UMT0 Cluster: 30S ribosomal protein S10; n=23;
Bacteria|Rep: 30S ribosomal protein S10 - Rickettsia
felis (Rickettsia azadi)
Length = 105
Score = 53.6 bits (123), Expect = 2e-06
Identities = 26/96 (27%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Frame = +2
Query: 167 HRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTW 346
++I+I L S + RSL++ ++++ K+ + GP+ +P KI R T ++P K+
Sbjct: 3 NKIKIRLKSFDHRSLDQATKEIVSAVKRTFANINGPIPLPRKIERFTVNRSP-HVHKKSR 61
Query: 347 DRFQMRIHXRVIDLHSPS-EIVKQITSINIEPGVXV 451
++F++R H R++ + P+ +V ++ +++ GV V
Sbjct: 62 EQFEIRKHKRLLVIDDPNPAVVDALSKVDLAAGVDV 97
>UniRef50_Q6MER9 Cluster: 30S ribosomal protein S10; n=7;
Bacteria|Rep: 30S ribosomal protein S10 - Protochlamydia
amoebophila (strain UWE25)
Length = 111
Score = 52.8 bits (121), Expect = 3e-06
Identities = 26/95 (27%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Frame = +2
Query: 170 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 349
+IRI L + R L++ D++ AK+ + GP+ +PT + T ++P K+ +
Sbjct: 14 KIRIRLKGYDQRLLDRSTGDIVETAKRTGAAIAGPIPLPTSCEKFTVLRSP-NIDRKSRE 72
Query: 350 RFQMRIHXRVIDLHSP-SEIVKQITSINIEPGVXV 451
+F++R H R+ID+ +P S+ + + ++ + GV +
Sbjct: 73 QFEIRTHRRLIDILNPTSKTIDALKTLTLPAGVDI 107
>UniRef50_Q7VQE9 Cluster: 30S ribosomal protein S10; n=10;
Proteobacteria|Rep: 30S ribosomal protein S10 -
Blochmannia floridanus
Length = 103
Score = 51.6 bits (118), Expect = 8e-06
Identities = 29/95 (30%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Frame = +2
Query: 170 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 349
RIRI L + + R +++ D++ AK+ +V GP+ +PTK R T +P D
Sbjct: 5 RIRIRLKAFDHRLIDRSTLDIVETAKRTGAQVHGPIPLPTKKERFTILVSP-HVNKDARD 63
Query: 350 RFQMRIHXRVIDLHSPSE-IVKQITSINIEPGVXV 451
++++R H R+ID+ P++ V + +++ GV V
Sbjct: 64 QYEIRTHKRLIDIVDPTDKTVDALMKLDLAAGVDV 98
>UniRef50_Q9LK61 Cluster: 30S ribosomal protein S10, chloroplast
precursor; n=33; cellular organisms|Rep: 30S ribosomal
protein S10, chloroplast precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 191
Score = 51.2 bits (117), Expect = 1e-05
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 1/116 (0%)
Frame = +2
Query: 107 AAAVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMP 286
A+ V S I +++P +IRI L S V +E C +++ A+ + GPV +P
Sbjct: 73 ASEVPSSSSISVDADKMAPKQKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLP 132
Query: 287 TKILRITTRKTPCGEGSKTWDRFQMRIHXRVID-LHSPSEIVKQITSINIEPGVXV 451
TK K+P + F++R H R+ID L+ ++ + + +++ GV V
Sbjct: 133 TKKRIYCVLKSPHVHKDARF-HFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDV 187
>UniRef50_Q2GEE0 Cluster: 30S ribosomal protein S10; n=5;
Proteobacteria|Rep: 30S ribosomal protein S10 -
Neorickettsia sennetsu (strain Miyayama)
Length = 103
Score = 49.6 bits (113), Expect = 3e-05
Identities = 26/95 (27%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Frame = +2
Query: 170 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 349
+IRI L S + L + +++ AK+ V GP+ +PT++ R T K+P + K+ +
Sbjct: 3 KIRIKLKSFDSGILHRSTKEIVMAAKRNGALVSGPIPLPTRVSRYTVNKSPHVD-KKSRE 61
Query: 350 RFQMRIHXRVIDLHS-PSEIVKQITSINIEPGVXV 451
+FQ+ +H +++L S + ++ T+ + GV +
Sbjct: 62 QFQLAVHKCLLELSSFNAHLLSTFTNFQLPAGVDI 96
>UniRef50_Q6F7R1 Cluster: 30S ribosomal protein S10; n=23;
Bacteria|Rep: 30S ribosomal protein S10 - Acinetobacter
sp. (strain ADP1)
Length = 103
Score = 49.2 bits (112), Expect = 4e-05
Identities = 28/95 (29%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Frame = +2
Query: 170 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 349
RIRI L S + R +++ +++ AK+ +V GP+ MPT+I R +P D
Sbjct: 5 RIRIRLKSFDHRLIDQSSQEIVETAKRTGAQVCGPIPMPTRIERFNVLTSP-HVNKDARD 63
Query: 350 RFQMRIHXRVIDLHSPSE-IVKQITSINIEPGVXV 451
++++R + R+ID+ P++ V + +++ GV V
Sbjct: 64 QYEIRTYKRLIDIVQPTDKTVDALMKLDLAAGVDV 98
>UniRef50_Q9TLV9 Cluster: Chloroplast 30S ribosomal protein S10;
n=1; Cyanidium caldarium|Rep: Chloroplast 30S ribosomal
protein S10 - Cyanidium caldarium
Length = 109
Score = 48.4 bits (110), Expect = 7e-05
Identities = 26/95 (27%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Frame = +2
Query: 170 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 349
++RI L+S + L C +++ K+ VKGPV +PT+ ++P + +
Sbjct: 12 KVRIKLSSYSASLLNLSCNNVLQSIKESNTSVKGPVFLPTRRRVYCVLRSP-HVNKDSRE 70
Query: 350 RFQMRIHXRVIDLHS-PSEIVKQITSINIEPGVXV 451
F++R H R+ID+ S SE ++ + +++ GV +
Sbjct: 71 HFEIRSHFRIIDISSCSSETIEMLMRLDLPTGVNI 105
>UniRef50_UPI0000D99BC8 Cluster: PREDICTED: similar to 40S ribosomal
protein S20; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S20 - Macaca mulatta
Length = 71
Score = 47.6 bits (108), Expect = 1e-04
Identities = 21/30 (70%), Positives = 27/30 (90%)
Frame = +2
Query: 356 QMRIHXRVIDLHSPSEIVKQITSINIEPGV 445
+M+IH ++IDL SPSEIVKQITS++IEP V
Sbjct: 33 KMKIHNQLIDLQSPSEIVKQITSVSIEPEV 62
Score = 31.5 bits (68), Expect = 8.7
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +2
Query: 128 KDIEKPQAEVSPIHRIRITLTSRNVRSLEKV 220
KD + IH+IRITL S NV+SLEK+
Sbjct: 4 KDRKNTHGAGGGIHQIRITLISCNVKSLEKM 34
>UniRef50_Q88XY7 Cluster: 30S ribosomal protein S10; n=18;
Bacteria|Rep: 30S ribosomal protein S10 - Lactobacillus
plantarum
Length = 102
Score = 46.4 bits (105), Expect = 3e-04
Identities = 25/95 (26%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Frame = +2
Query: 170 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 349
+IRI L + R L++ ++ AK+ + GP+ +PT+ T ++P + + +
Sbjct: 5 KIRIRLKAYEHRILDQSADKIVETAKRTGATISGPIPLPTERTIYTVLRSP-HKFKDSRE 63
Query: 350 RFQMRIHXRVIDLHSPS-EIVKQITSINIEPGVXV 451
+F+MR H R+ID+ +P+ + V + +++ GV +
Sbjct: 64 QFEMRTHKRLIDIVNPTPKTVDSLMKLDLPSGVDI 98
>UniRef50_Q8SQX6 Cluster: 40S RIBOSOMAL PROTEIN S20; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S20
- Encephalitozoon cuniculi
Length = 120
Score = 46.0 bits (104), Expect = 4e-04
Identities = 21/83 (25%), Positives = 43/83 (51%)
Frame = +2
Query: 170 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 349
++ I + S + + KVC + K ++ +P K+ ITT + P G+G+K W
Sbjct: 20 KVCIDMASLEEKQINKVCREFYEYGKTFIDDLQRETVLPKKVESITTLRNPSGQGTKKWS 79
Query: 350 RFQMRIHXRVIDLHSPSEIVKQI 418
R++M +H R L + + ++++
Sbjct: 80 RYKMIVHLRNFYLEATHQQLEKV 102
>UniRef50_Q7U4D0 Cluster: 30S ribosomal protein S10; n=136; cellular
organisms|Rep: 30S ribosomal protein S10 - Synechococcus
sp. (strain WH8102)
Length = 106
Score = 45.2 bits (102), Expect = 7e-04
Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Frame = +2
Query: 170 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 349
+IRI L + + R L+ C +I A + GP+ +PTK ++P + + +
Sbjct: 9 KIRIRLKAFDRRMLDLSCDKIIETADQTAATAIGPIPLPTKRKIYCVLRSPHVD-KDSRE 67
Query: 350 RFQMRIHXRVIDLHSPS-EIVKQITSINIEPGVXV 451
F+ R H R+ID++SPS + + + +++ GV +
Sbjct: 68 HFETRTHRRIIDIYSPSAKTIDALMKLDLPSGVDI 102
>UniRef50_P66331 Cluster: 30S ribosomal protein S10; n=234;
Bacteria|Rep: 30S ribosomal protein S10 - Listeria
innocua
Length = 102
Score = 44.4 bits (100), Expect = 0.001
Identities = 26/95 (27%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Frame = +2
Query: 170 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 349
+IRI L + + R L++ ++ AK+ V GP+ +PT+ I T + + +
Sbjct: 5 KIRIRLKAYDHRILDQSAEKIVETAKRSGASVSGPIPLPTE-KSIYTVLRAVHKYKDSRE 63
Query: 350 RFQMRIHXRVIDLHSPS-EIVKQITSINIEPGVXV 451
+F+MR H R+ID+ +P+ + V + +++ GV +
Sbjct: 64 QFEMRTHKRLIDIVNPTPQTVDSLMRLDLPSGVDI 98
>UniRef50_O21246 Cluster: Mitochondrial ribosomal protein S10; n=1;
Reclinomonas americana|Rep: Mitochondrial ribosomal
protein S10 - Reclinomonas americana
Length = 116
Score = 41.5 bits (93), Expect = 0.008
Identities = 23/78 (29%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +2
Query: 164 IHRIRITLTSRNVRSLEKVCADLI-NGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSK 340
I + + L S ++ L+ CA ++ N Q L++ GP+ +PTKI +IT ++P + K
Sbjct: 3 ITKCSLHLKSFDLDVLKDSCALILKNKINLQNLKLTGPINLPTKIKKITVLRSPHID-KK 61
Query: 341 TWDRFQMRIHXRVIDLHS 394
+ ++F++R + + I + S
Sbjct: 62 SREQFEIRTYTKTIQIES 79
>UniRef50_Q8EUB2 Cluster: 30S ribosomal protein S10; n=4;
Mycoplasma|Rep: 30S ribosomal protein S10 - Mycoplasma
penetrans
Length = 102
Score = 40.7 bits (91), Expect = 0.014
Identities = 27/96 (28%), Positives = 52/96 (54%), Gaps = 1/96 (1%)
Frame = +2
Query: 167 HRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTW 346
+ ++I L S + R L++ +I ++ +VKGP+ +PTK T ++P +
Sbjct: 3 NEMKIKLFSYDHRLLDQSVRKIIKSSQDSGAKVKGPIPLPTKKEIFTICRSP-HVNKTSR 61
Query: 347 DRFQMRIHXRVIDLHSPSEIVKQ-ITSINIEPGVXV 451
++F+ R H R+I L + +E K+ + +I I GV +
Sbjct: 62 EQFERRTHQRLIILLNTTEKTKEYLKNIIIPSGVDI 97
>UniRef50_Q73H86 Cluster: 30S ribosomal protein S10; n=2;
Wolbachia|Rep: 30S ribosomal protein S10 - Wolbachia
pipientis wMel
Length = 109
Score = 40.3 bits (90), Expect = 0.019
Identities = 24/94 (25%), Positives = 48/94 (51%), Gaps = 1/94 (1%)
Frame = +2
Query: 173 IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDR 352
I I + + + LE+ I+ K+ ++ GP+ +P K + ++P + K+ ++
Sbjct: 5 IYINIKAFDCSLLEECVRKFIDELKRSSAKLSGPIALPRKDSKFIVNRSPHVD-KKSREQ 63
Query: 353 FQMRIHXRVIDLHSPSEIVKQ-ITSINIEPGVXV 451
F+MR R+I LH + + Q +T ++ GV V
Sbjct: 64 FEMRTSRRLIVLHDLTPTMMQMLTGLSFSAGVEV 97
>UniRef50_Q8A475 Cluster: 30S ribosomal protein S10; n=247; cellular
organisms|Rep: 30S ribosomal protein S10 - Bacteroides
thetaiotaomicron
Length = 101
Score = 37.5 bits (83), Expect = 0.13
Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Frame = +2
Query: 170 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 349
+IRI L S + ++K ++ K V GP+ +PT RI T K+ +
Sbjct: 4 KIRIKLKSYDHNLVDKSAEKIVRTVKATGAIVSGPIPLPTH-KRIFTVNRSTFVNKKSRE 62
Query: 350 RFQMRIHXRVIDLH-SPSEIVKQITSINIEPGVXV 451
+F++ + R+ID++ S ++ V + + + GV V
Sbjct: 63 QFELSSYKRLIDIYSSTAKTVDALMKLELPSGVEV 97
>UniRef50_Q6YR19 Cluster: 30S ribosomal protein S10; n=5;
Bacteria|Rep: 30S ribosomal protein S10 - Onion yellows
phytoplasma
Length = 107
Score = 36.3 bits (80), Expect = 0.31
Identities = 19/94 (20%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Frame = +2
Query: 173 IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDR 352
I+I L + + +++ +I+ K ++GP+ +PT+ T ++P + ++
Sbjct: 9 IKIILRAYDHHLIDQSAKKIIDILTKTGANIEGPIPLPTRKEVFTVLRSPF-VNKDSREQ 67
Query: 353 FQMRIHXRVIDLHSPS-EIVKQITSINIEPGVXV 451
F+ R H R+I + +P+ + ++ + I++ P + +
Sbjct: 68 FERRTHKRLIQIINPNKKTIESLMHISLPPAIDI 101
>UniRef50_A0T0K7 Cluster: Chloroplast 30S ribosomal protein S10;
n=3; Bacillariophyta|Rep: Chloroplast 30S ribosomal
protein S10 - Phaeodactylum tricornutum
Length = 107
Score = 35.1 bits (77), Expect = 0.71
Identities = 22/94 (23%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Frame = +2
Query: 170 RIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWD 349
+IR+ L S N L C ++N + G + +PT+ ++P + + +
Sbjct: 8 KIRVRLESFNHELLNSSCQKIVNILQNTLSNSIGVITLPTRKRIYCVLRSPHVD-KDSRE 66
Query: 350 RFQMRIHXRVIDLHSPSE--IVKQITSINIEPGV 445
F++R H R+++++ SE I ++ ++ PGV
Sbjct: 67 HFEIRTHKRILEIYYNSEVPIFDLLSEADLPPGV 100
>UniRef50_Q5V488 Cluster: Ribosomal protein S10p; n=2;
Halobacteriaceae|Rep: Ribosomal protein S10p -
Haloarcula marismortui (Halobacterium marismortui)
Length = 138
Score = 33.5 bits (73), Expect = 2.2
Identities = 23/95 (24%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Frame = +2
Query: 179 ITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDRFQ 358
+T TS + LE ++ A+++ + +KGP + LRI K+ +G + +D +
Sbjct: 35 LTFTSGDRHRLEDTVTEIKQSAEQKGVELKGPHPKQPQELRIPQSKSLGPDGGR-FDSWT 93
Query: 359 MRIHXRVIDLHSPSEIVKQIT------SINIEPGV 445
++ R I++ E + +T +I++E GV
Sbjct: 94 HTVYTRTIEIVGYEEFARDVTQRTFPNAIHVEAGV 128
>UniRef50_A0T870 Cluster: Putative uncharacterized protein; n=2;
Burkholderia ambifaria|Rep: Putative uncharacterized
protein - Burkholderia ambifaria MC40-6
Length = 325
Score = 33.1 bits (72), Expect = 2.9
Identities = 22/52 (42%), Positives = 29/52 (55%)
Frame = +3
Query: 69 KLFISAGIQQATWQPL*CQAKTSRNPRQRSPLFTASGSLLLLAMCAHSRRSV 224
+ FI+AGI TWQPL T+R P + F+ G+L LLA A R S+
Sbjct: 231 RTFIAAGIHPETWQPL----ATARRPAMIA--FSIIGALGLLAFWAWGRMSL 276
>UniRef50_Q9YMJ9 Cluster: LdOrf-128 peptide; n=1; Lymantria dispar
MNPV|Rep: LdOrf-128 peptide - Lymantria dispar
multicapsid nuclear polyhedrosis virus (LdMNPV)
Length = 226
Score = 32.3 bits (70), Expect = 5.0
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 278 RMPTKILRITTRKTPCGEGSKTWDRFQMRIHXRV 379
R+P ++ + +TPC S W+R ++R+H RV
Sbjct: 8 RLPLRVY-VDEAETPCWRASADWERGELRLHYRV 40
>UniRef50_Q89ES3 Cluster: FliF protein; n=7; Rhizobiales|Rep: FliF
protein - Bradyrhizobium japonicum
Length = 519
Score = 31.9 bits (69), Expect = 6.6
Identities = 20/86 (23%), Positives = 40/86 (46%)
Frame = +2
Query: 137 EKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRK 316
E P+ S + R+R L ++ +R++ + A +NG K Q++ + T +
Sbjct: 142 EAPEPSASIVVRVRGALEAQQIRAIRHLVASAVNGLKPQRVSIVDEAGQLLADGAATDPE 201
Query: 317 TPCGEGSKTWDRFQMRIHXRVIDLHS 394
G+ +T F+ R+ +V D+ S
Sbjct: 202 QALGDERRT--TFEKRMRKQVEDIVS 225
>UniRef50_A2U5E9 Cluster: Transcriptional regulator, MarR family
precursor; n=1; Bacillus coagulans 36D1|Rep:
Transcriptional regulator, MarR family precursor -
Bacillus coagulans 36D1
Length = 176
Score = 31.5 bits (68), Expect = 8.7
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 2/91 (2%)
Frame = +2
Query: 149 AEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCG 328
AEV R+ I L SRN++ + +D++ + L VK P + + I+ G
Sbjct: 41 AEVLTGKRVSIKLLSRNLKMTQSTVSDIVERLTLKGLLVKTPSASDKRSVEISPSSELEG 100
Query: 329 EGSKTWDRFQMRIHXRVIDLHSPSE--IVKQ 415
E S+ R + ++L P+E IV+Q
Sbjct: 101 ELSENISRIINQSFVDALNLLQPNEQDIVEQ 131
>UniRef50_A7QMI1 Cluster: Chromosome chr19 scaffold_126, whole
genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr19 scaffold_126, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 215
Score = 31.5 bits (68), Expect = 8.7
Identities = 23/58 (39%), Positives = 31/58 (53%)
Frame = -1
Query: 276 TGPFTRSFCFLAPLIRSAQTFSSERTLREVRVILMR*IGETSAWGFSMSLPDTTAAAM 103
TG RSF LA RSAQ+F +E T RE+ L+ S+ GF++ + T A M
Sbjct: 107 TGGTPRSFTTLA---RSAQSFGNETTRREIHASLLM---ACSSAGFTLLVTGLTLARM 158
>UniRef50_Q4QJ47 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 1024
Score = 31.5 bits (68), Expect = 8.7
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 97 KQHGSRCSVRQRHRETPGRGLPYSPHQDHSYFSQCALTREGLC 225
++HG R ++R T RG YS H D S + + +T G C
Sbjct: 906 RRHGGRGQAQRRSNPTSDRGTAYSSHLDSSVWEESRVT-YGTC 947
>UniRef50_P75581 Cluster: 30S ribosomal protein S10; n=2;
Mycoplasma|Rep: 30S ribosomal protein S10 - Mycoplasma
pneumoniae
Length = 108
Score = 31.5 bits (68), Expect = 8.7
Identities = 22/94 (23%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = +2
Query: 173 IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDR 352
++I L S + L+ ++ K +++KGP+ +PTK IT ++P + + ++
Sbjct: 12 LKIKLESYDSTLLDLTTKKIVEVVKGVDVKIKGPLPLPTKKEVITIIRSPHVDKASR-EQ 70
Query: 353 FQMRIHXRVIDLHSPSE-IVKQITSINIEPGVXV 451
F+ H R++ L ++ + + I I GV +
Sbjct: 71 FEKNRHKRLMILVDVNQGAIDSLKRIKIPVGVTL 104
>UniRef50_O50185 Cluster: 30S ribosomal protein S10; n=5; Mycoplasma
hyopneumoniae|Rep: 30S ribosomal protein S10 -
Mycoplasma hyopneumoniae (strain 232)
Length = 106
Score = 31.5 bits (68), Expect = 8.7
Identities = 20/72 (27%), Positives = 36/72 (50%)
Frame = +2
Query: 173 IRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEGSKTWDR 352
I+I L S + R ++ +I A++ + +GPV +PT I T K+ ++
Sbjct: 6 IKIKLKSFDHRQIDAAAKKIILLARELNIETRGPVPLPTS-RAIYTILRSVHINKKSREQ 64
Query: 353 FQMRIHXRVIDL 388
F+ R H R++ L
Sbjct: 65 FESRTHKRLVIL 76
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 458,054,867
Number of Sequences: 1657284
Number of extensions: 9274078
Number of successful extensions: 21390
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 20963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21374
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23511729640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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