Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_F01
(453 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L06498-1|AAA60286.1| 119|Homo sapiens ribosomal protein S20 pro... 182 5e-46
BC087850-1|AAH87850.1| 119|Homo sapiens ribosomal protein S20 p... 182 5e-46
BC007507-1|AAH07507.1| 119|Homo sapiens ribosomal protein S20 p... 182 5e-46
AB061842-1|BAB79480.1| 119|Homo sapiens ribosomal protein S20 p... 182 5e-46
AB007156-1|BAA25820.1| 60|Homo sapiens ribosomal protein S20 p... 123 2e-28
D25538-1|BAA05021.2| 1088|Homo sapiens KIAA0037 protein. 30 4.3
BC126271-1|AAI26272.1| 1080|Homo sapiens adenylate cyclase 7 pro... 30 4.3
AB029009-1|BAA83038.1| 902|Homo sapiens KIAA1086 protein protein. 29 9.8
>L06498-1|AAA60286.1| 119|Homo sapiens ribosomal protein S20
protein.
Length = 119
Score = 182 bits (443), Expect = 5e-46
Identities = 89/109 (81%), Positives = 95/109 (87%), Gaps = 1/109 (0%)
Frame = +2
Query: 128 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 304
KD K E IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63
Query: 305 TTRKTPCGEGSKTWDRFQMRIHXRVIDLHSPSEIVKQITSINIEPGVXV 451
TTRKTPCGEGSKTWDRFQMRIH R+IDLHSPSEIVKQITSI+IEPGV V
Sbjct: 64 TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEV 112
>BC087850-1|AAH87850.1| 119|Homo sapiens ribosomal protein S20
protein.
Length = 119
Score = 182 bits (443), Expect = 5e-46
Identities = 89/109 (81%), Positives = 95/109 (87%), Gaps = 1/109 (0%)
Frame = +2
Query: 128 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 304
KD K E IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63
Query: 305 TTRKTPCGEGSKTWDRFQMRIHXRVIDLHSPSEIVKQITSINIEPGVXV 451
TTRKTPCGEGSKTWDRFQMRIH R+IDLHSPSEIVKQITSI+IEPGV V
Sbjct: 64 TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEV 112
>BC007507-1|AAH07507.1| 119|Homo sapiens ribosomal protein S20
protein.
Length = 119
Score = 182 bits (443), Expect = 5e-46
Identities = 89/109 (81%), Positives = 95/109 (87%), Gaps = 1/109 (0%)
Frame = +2
Query: 128 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 304
KD K E IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63
Query: 305 TTRKTPCGEGSKTWDRFQMRIHXRVIDLHSPSEIVKQITSINIEPGVXV 451
TTRKTPCGEGSKTWDRFQMRIH R+IDLHSPSEIVKQITSI+IEPGV V
Sbjct: 64 TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEV 112
>AB061842-1|BAB79480.1| 119|Homo sapiens ribosomal protein S20
protein.
Length = 119
Score = 182 bits (443), Expect = 5e-46
Identities = 89/109 (81%), Positives = 95/109 (87%), Gaps = 1/109 (0%)
Frame = +2
Query: 128 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 304
KD K E IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63
Query: 305 TTRKTPCGEGSKTWDRFQMRIHXRVIDLHSPSEIVKQITSINIEPGVXV 451
TTRKTPCGEGSKTWDRFQMRIH R+IDLHSPSEIVKQITSI+IEPGV V
Sbjct: 64 TTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEV 112
>AB007156-1|BAA25820.1| 60|Homo sapiens ribosomal protein S20
protein.
Length = 60
Score = 123 bits (297), Expect = 2e-28
Identities = 56/60 (93%), Positives = 58/60 (96%)
Frame = +2
Query: 266 KGPVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHXRVIDLHSPSEIVKQITSINIEPGV 445
KGPVRMPTK LRITTRKTPCGEGSKTWDRFQMRIH R+IDLHSPSEIVKQITSI+IEPGV
Sbjct: 1 KGPVRMPTKTLRITTRKTPCGEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGV 60
>D25538-1|BAA05021.2| 1088|Homo sapiens KIAA0037 protein.
Length = 1088
Score = 29.9 bits (64), Expect = 4.3
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +1
Query: 67 KSCLSRPEFNKQHGSRC-SVRQRHRETPGRGL-PYSPHQDHSYFSQCALTREGL 222
+ +S E + +G R SV QRHR TP R + P +D SY + EGL
Sbjct: 511 RESVSSGETHVPNGRRPKSVPQRHRRTPDRSMSPKGRSEDDSYDDEMLSAIEGL 564
>BC126271-1|AAI26272.1| 1080|Homo sapiens adenylate cyclase 7
protein.
Length = 1080
Score = 29.9 bits (64), Expect = 4.3
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +1
Query: 67 KSCLSRPEFNKQHGSRC-SVRQRHRETPGRGL-PYSPHQDHSYFSQCALTREGL 222
+ +S E + +G R SV QRHR TP R + P +D SY + EGL
Sbjct: 503 RESVSSGETHVPNGRRPKSVPQRHRRTPDRSMSPKGRSEDDSYDDEMLSAIEGL 556
>AB029009-1|BAA83038.1| 902|Homo sapiens KIAA1086 protein protein.
Length = 902
Score = 28.7 bits (61), Expect = 9.8
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = +1
Query: 148 GRGLPYSPHQDHSYFSQCALTREGLC*PNQWSQETEAACKGPSPHANQDPA 300
G+ ++D YF AL + + T+ AC PSPH + A
Sbjct: 57 GQSAAARSYEDRPYFQSAALQSGRMTAADSGQPGTQEACGQPSPHGSHSHA 107
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,300,640
Number of Sequences: 237096
Number of extensions: 1520984
Number of successful extensions: 3159
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3159
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3758237868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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