Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_E24
(616 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93; Eukaryo... 258 8e-68
UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82; Eukaryo... 237 2e-61
UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8; Euteleostomi... 210 1e-53
UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21; Eukaryo... 197 2e-49
UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN full... 180 2e-44
UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4; Eukaryot... 173 3e-42
UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19; Eukaryo... 164 2e-39
UniRef50_UPI000049933B Cluster: conserved hypothetical protein; ... 89 2e-31
UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;... 125 1e-27
UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma j... 100 5e-20
UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillard... 91 3e-17
UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamb... 83 5e-15
UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whol... 80 5e-14
UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitoz... 76 8e-13
UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces ... 64 3e-09
UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella... 58 1e-07
UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole gen... 52 1e-05
UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5; Archaea... 43 0.007
UniRef50_Q9VL72 Cluster: CG5899-PA, isoform A; n=5; Diptera|Rep:... 36 0.77
UniRef50_Q3SAD8 Cluster: Putative uncharacterized protein; n=1; ... 35 1.3
UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1; Methano... 35 1.3
UniRef50_A6SGH0 Cluster: Putative uncharacterized protein; n=1; ... 34 2.3
UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7; Archaea... 34 3.1
UniRef50_UPI0000F32D0C Cluster: Zinc finger CCCH domain-containi... 32 9.4
UniRef50_A7F1W3 Cluster: Putative uncharacterized protein; n=1; ... 32 9.4
UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6; Archaea... 32 9.4
>UniRef50_P62241 Cluster: 40S ribosomal protein S8; n=93;
Eukaryota|Rep: 40S ribosomal protein S8 - Homo sapiens
(Human)
Length = 208
Score = 258 bits (632), Expect = 8e-68
Identities = 125/190 (65%), Positives = 144/190 (75%), Gaps = 1/190 (0%)
Frame = +3
Query: 48 GNVRPYARRGSMS*GVPL-QTPGSVLSVSTPXRSRGGNTKYRALRLDTGNFSWGSECSTR 224
G +PY ++ G P T + T R RGGN KYRALRLD GNFSWGSEC TR
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHT-VRVRGGNKKYRALRLDVGNFSWGSECCTR 74
Query: 225 KTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKXGAKLTXAEE 404
KTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRK GAKLT EE
Sbjct: 75 KTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEE 134
Query: 405 AIINXXRSQKTARKYLAXQRLAKVEGALXEQFHTGRLLACVASRPGQCGRADGYILQGKE 584
I+N RS+K +KY ++ AK+ L EQF G+LLAC+ASRPGQCGRADGY+L+GKE
Sbjct: 135 EILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKE 194
Query: 585 LEFYLXKIKS 614
LEFYL KIK+
Sbjct: 195 LEFYLRKIKA 204
>UniRef50_Q8MLY8 Cluster: 40S ribosomal protein S8; n=82;
Eukaryota|Rep: 40S ribosomal protein S8 - Drosophila
melanogaster (Fruit fly)
Length = 208
Score = 237 bits (579), Expect = 2e-61
Identities = 111/160 (69%), Positives = 130/160 (81%), Gaps = 2/160 (1%)
Frame = +3
Query: 141 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 320
R+RGGNTK RALRL+TGNF+W SE RKTRI DVVYNASNNELVRTKTLVKN+IVV+DA
Sbjct: 47 RTRGGNTKLRALRLETGNFAWASEGVARKTRIADVVYNASNNELVRTKTLVKNSIVVIDA 106
Query: 321 TPFRQWYESHYTLPLGRKXGAKLTXAEEA--IINXXRSQKTARKYLAXQRLAKVEGALXE 494
TPFRQWYE+HY LPLGRK K E+ ++ RS+K +KYL Q+ KVE AL +
Sbjct: 107 TPFRQWYEAHYVLPLGRKRNPKHAQKEDENDVLTKKRSEKVMKKYLERQKYGKVEQALED 166
Query: 495 QFHTGRLLACVASRPGQCGRADGYILQGKELEFYLXKIKS 614
QF +GR+LAC++SRPGQCGR+DGYIL+GKELEFYL KIKS
Sbjct: 167 QFTSGRILACISSRPGQCGRSDGYILEGKELEFYLKKIKS 206
Score = 50.4 bits (115), Expect = 3e-05
Identities = 21/29 (72%), Positives = 25/29 (86%)
Frame = +2
Query: 47 GKRAPIRKKRKYELGRPAANTRLGPQRIH 133
GKR +RKKRK+ELGRPAANT+LG R+H
Sbjct: 16 GKRKSLRKKRKFELGRPAANTKLGSGRVH 44
>UniRef50_Q5JR95 Cluster: Ribosomal protein S8; n=8;
Euteleostomi|Rep: Ribosomal protein S8 - Homo sapiens
(Human)
Length = 188
Score = 210 bits (514), Expect = 1e-53
Identities = 103/153 (67%), Positives = 119/153 (77%)
Frame = +3
Query: 156 NTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQ 335
NTK R+ T G C TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQ
Sbjct: 35 NTKIGPRRIHTVRVRGG--C-TRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQ 91
Query: 336 WYESHYTLPLGRKXGAKLTXAEEAIINXXRSQKTARKYLAXQRLAKVEGALXEQFHTGRL 515
WYESHY LPLGRK GAKLT EE I+N RS+K +KY ++ AK+ L EQF G+L
Sbjct: 92 WYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKL 151
Query: 516 LACVASRPGQCGRADGYILQGKELEFYLXKIKS 614
LAC+ASRPGQCGRADGY+L+GKELEFYL KIK+
Sbjct: 152 LACIASRPGQCGRADGYVLEGKELEFYLRKIKA 184
Score = 56.4 bits (130), Expect = 5e-07
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +2
Query: 47 GKRAPIRKKRKYELGRPAANTRLGPQRIHS 136
GKR P KKRKYELGRPAANT++GP+RIH+
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHT 45
>UniRef50_Q08069 Cluster: 40S ribosomal protein S8; n=21;
Eukaryota|Rep: 40S ribosomal protein S8 - Zea mays
(Maize)
Length = 221
Score = 197 bits (480), Expect = 2e-49
Identities = 99/165 (60%), Positives = 120/165 (72%), Gaps = 8/165 (4%)
Frame = +3
Query: 141 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 320
R RGGN K+RALRLDTGN+SWGSE TRKTRI+DVVYNASNNELVRT+TLVK+AIV VDA
Sbjct: 48 RVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDA 107
Query: 321 TPFRQWYESHYTLPLGRKX---GAKLTXA-----EEAIINXXRSQKTARKYLAXQRLAKV 476
PF+QWY +HY + +GRK AK A E A +S RK + +
Sbjct: 108 APFKQWYLTHYGVDIGRKKKTPAAKKDNAEGQEVEAAAEETKKSNHVTRKLEKRKEGRTL 167
Query: 477 EGALXEQFHTGRLLACVASRPGQCGRADGYILQGKELEFYLXKIK 611
+ + EQF +GRLLAC++SRPGQCGRADGYIL+GKELEFY+ K++
Sbjct: 168 DPHIEEQFGSGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQ 212
Score = 35.9 bits (79), Expect = 0.77
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +2
Query: 47 GKRAPIRKKRKYELGRPAANTRLGPQR 127
GK+ RKKRKYELGR ANT+L +
Sbjct: 16 GKQKAWRKKRKYELGRQPANTKLSSNK 42
>UniRef50_Q3UA25 Cluster: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence; n=9;
Deuterostomia|Rep: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830031J02
product:ribosomal protein S8, full insert sequence - Mus
musculus (Mouse)
Length = 152
Score = 180 bits (438), Expect = 2e-44
Identities = 89/135 (65%), Positives = 100/135 (74%), Gaps = 1/135 (0%)
Frame = +3
Query: 48 GNVRPYARRGSMS*GVPL-QTPGSVLSVSTPXRSRGGNTKYRALRLDTGNFSWGSECSTR 224
G +PY ++ G P T + T R RGGN KYRALRLD GNFSWGSEC TR
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHT-VRVRGGNKKYRALRLDVGNFSWGSECCTR 74
Query: 225 KTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKXGAKLTXAEE 404
KTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRK GAKLT EE
Sbjct: 75 KTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEE 134
Query: 405 AIINXXRSQKTARKY 449
I+N RS+K +KY
Sbjct: 135 EILNKKRSKKIQKKY 149
>UniRef50_Q4N3P0 Cluster: 40S ribosomal protein S8; n=4;
Eukaryota|Rep: 40S ribosomal protein S8 - Theileria
parva
Length = 188
Score = 173 bits (421), Expect = 3e-42
Identities = 89/152 (58%), Positives = 110/152 (72%)
Frame = +3
Query: 141 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 320
R RGGN K+RALRLD+GNFSWGS+ TRKTR++DVVYNAS+NELVRTKTLVKNAIV VD
Sbjct: 47 RCRGGNLKFRALRLDSGNFSWGSQNVTRKTRVMDVVYNASSNELVRTKTLVKNAIVTVDP 106
Query: 321 TPFRQWYESHYTLPLGRKXGAKLTXAEEAIINXXRSQKTARKYLAXQRLAKVEGALXEQF 500
TPF+ W+++HY L LG+ +E+ S+K A A V L +QF
Sbjct: 107 TPFKLWFKTHYGLELGK-------SSEDP----QASEKVA---------ALVPRTLLDQF 146
Query: 501 HTGRLLACVASRPGQCGRADGYILQGKELEFY 596
+GRLLAC++SRPGQCGR DGY+L+G+EL FY
Sbjct: 147 SSGRLLACISSRPGQCGRCDGYVLEGEELNFY 178
Score = 39.5 bits (88), Expect = 0.062
Identities = 17/29 (58%), Positives = 24/29 (82%), Gaps = 1/29 (3%)
Frame = +2
Query: 47 GKRAPI-RKKRKYELGRPAANTRLGPQRI 130
G R P+ +KKRKYELGRP++NT+LG + +
Sbjct: 15 GGRYPVHKKKRKYELGRPSSNTKLGSKLV 43
>UniRef50_P25204 Cluster: 40S ribosomal protein S8; n=19;
Eukaryota|Rep: 40S ribosomal protein S8 - Leishmania
major
Length = 220
Score = 164 bits (398), Expect = 2e-39
Identities = 85/174 (48%), Positives = 113/174 (64%), Gaps = 14/174 (8%)
Frame = +3
Query: 132 TPXRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVV 311
+P R+RGGN K RALRLDTGNF+W SE + R++DVVYNA++NELVRTKTLVKN IV
Sbjct: 44 SPVRARGGNFKIRALRLDTGNFAWASEAIAHRVRLLDVVYNATSNELVRTKTLVKNCIVA 103
Query: 312 VDATPFRQWYESHYTLPL------------GRKXGAKL--TXAEEAIINXXRSQKTARKY 449
VDA PF++WY HY + L K G K A++ +N S K R++
Sbjct: 104 VDAAPFKRWYAKHYGIDLDADKKSTKAAVAAEKKGRKSAHAAADKYDVNKA-SPKLQREW 162
Query: 450 LAXQRLAKVEGALXEQFHTGRLLACVASRPGQCGRADGYILQGKELEFYLXKIK 611
+R +VE A+ +Q GR+LA + SRPGQ GRADG +L+G EL+FYL +++
Sbjct: 163 TRRRRNHRVEKAIADQLREGRVLARITSRPGQSGRADGILLEGAELQFYLKRLE 216
Score = 32.7 bits (71), Expect = 7.1
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +2
Query: 47 GKRAPIRKKRKYELGRPAANTRLGPQRI 130
GK RK+ K ELGR ANTRLG +R+
Sbjct: 16 GKTKIHRKRMKAELGRLPANTRLGARRV 43
>UniRef50_UPI000049933B Cluster: conserved hypothetical protein;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 237
Score = 88.6 bits (210), Expect(2) = 2e-31
Identities = 40/71 (56%), Positives = 51/71 (71%)
Frame = +3
Query: 141 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 320
R R G K RALRL+ GNFSW S+ T+ T+I++VVYNAS+N+ VRT TLVK AI+ +D
Sbjct: 47 RCRYGIIKRRALRLENGNFSWASQSITKGTKILNVVYNASDNDFVRTNTLVKGAIIEIDP 106
Query: 321 TPFRQWYESHY 353
PFR W+ Y
Sbjct: 107 APFRLWFLKFY 117
Score = 69.7 bits (163), Expect(2) = 2e-31
Identities = 34/76 (44%), Positives = 50/76 (65%), Gaps = 1/76 (1%)
Frame = +3
Query: 384 KLTXAEEAIINXXRS-QKTARKYLAXQRLAKVEGALXEQFHTGRLLACVASRPGQCGRAD 560
++ + A++N ++ QK K L + K + AL E F +GR+LAC++SRPGQ G +
Sbjct: 157 QIAETQVALMNPSKTMQKKYAKKLEVLKNMKFDEALLEGFQSGRVLACISSRPGQTGSVE 216
Query: 561 GYILQGKELEFYLXKI 608
GYIL+GKEL+FY KI
Sbjct: 217 GYILEGKELDFYSKKI 232
Score = 35.9 bits (79), Expect = 0.77
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = +2
Query: 47 GKRAPIRKKRKYELGRPAANTRLGPQRIH 133
GK+ ++KK+K +GR ANTRLG R+H
Sbjct: 16 GKKNSMQKKKKNTMGRQPANTRLGAIRVH 44
>UniRef50_Q6QP50 Cluster: Putative 40S ribosomal protein S8; n=1;
Zea mays|Rep: Putative 40S ribosomal protein S8 - Zea
mays (Maize)
Length = 245
Score = 125 bits (301), Expect = 1e-27
Identities = 57/78 (73%), Positives = 67/78 (85%)
Frame = +3
Query: 141 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 320
R RGGNTK+RALR DT N+SWGSE TRKTRI+DVVY A+NNELVRT+TLVK+AIV VDA
Sbjct: 145 RVRGGNTKWRALRFDTCNYSWGSEALTRKTRILDVVYIATNNELVRTQTLVKSAIVQVDA 204
Query: 321 TPFRQWYESHYTLPLGRK 374
PF+QWY +HY + +GRK
Sbjct: 205 APFKQWYLTHYGVDIGRK 222
>UniRef50_Q5C1R4 Cluster: SJCHGC03085 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03085 protein - Schistosoma
japonicum (Blood fluke)
Length = 120
Score = 99.5 bits (237), Expect = 5e-20
Identities = 54/116 (46%), Positives = 73/116 (62%), Gaps = 9/116 (7%)
Frame = +3
Query: 294 KNAIVVVDATPFRQWYESHYTLPLGR-----KXGAKLT--XAEEAIINXXRSQKTARKYL 452
K+AIV + PFRQW+E+ Y LG K G +T EE + RS+ +K+
Sbjct: 1 KSAIVQIGGAPFRQWFEAPYLKELGPPKVVCKKGPSVTPENPEEDFLLKKRSKSALKKFE 60
Query: 453 AXQRL--AKVEGALXEQFHTGRLLACVASRPGQCGRADGYILQGKELEFYLXKIKS 614
Q L A VE +L E+F TGRLLAC++S+PGQ GRADGY+ +GKELEF+ K+K+
Sbjct: 61 TRQALPQANVEESLKEEFVTGRLLACISSKPGQVGRADGYLFEGKELEFFSKKLKA 116
>UniRef50_Q9AW20 Cluster: 40S ribosomal protein S8; n=1; Guillardia
theta|Rep: 40S ribosomal protein S8 - Guillardia theta
(Cryptomonas phi)
Length = 178
Score = 90.6 bits (215), Expect = 3e-17
Identities = 62/157 (39%), Positives = 84/157 (53%)
Frame = +3
Query: 141 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 320
R RGG K RAL L GNFS+ S T K +I+ V +N S+NELVRT TL K +IV +D
Sbjct: 47 RVRGGGVKTRALFLSYGNFSFVSIQRTFKAKILSVAFNESSNELVRTNTLTKGSIVYLDI 106
Query: 321 TPFRQWYESHYTLPLGRKXGAKLTXAEEAIINXXRSQKTARKYLAXQRLAKVEGALXEQF 500
AK I N + K A ++ + L +Q
Sbjct: 107 --------------------AKTLIYNTLIRNLNSNPKIAEDTISNK-------ILIDQI 139
Query: 501 HTGRLLACVASRPGQCGRADGYILQGKELEFYLXKIK 611
+G++LA + SRPGQ GRADGYIL+G+EL+++L KI+
Sbjct: 140 LSGKILARICSRPGQSGRADGYILEGQELDYFLKKIQ 176
>UniRef50_Q7R1W8 Cluster: Ribosomal protein S8; n=1; Giardia lamblia
ATCC 50803|Rep: Ribosomal protein S8 - Giardia lamblia
ATCC 50803
Length = 174
Score = 83.0 bits (196), Expect = 5e-15
Identities = 37/64 (57%), Positives = 48/64 (75%)
Frame = +3
Query: 141 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 320
R RGGN K RALRL G+F+WGS + K RI+ VVYN+++NELVRT TLVK +V +D+
Sbjct: 56 RCRGGNIKRRALRLSHGSFAWGSADISHKARILQVVYNSTSNELVRTNTLVKGCVVQIDS 115
Query: 321 TPFR 332
PF+
Sbjct: 116 APFK 119
Score = 47.6 bits (108), Expect = 2e-04
Identities = 21/41 (51%), Positives = 28/41 (68%)
Frame = +3
Query: 486 LXEQFHTGRLLACVASRPGQCGRADGYILQGKELEFYLXKI 608
+ +Q +LA ++SRPGQ G ADGYIL+G EL FY K+
Sbjct: 131 ILDQIRGDHILARISSRPGQVGTADGYILEGPELLFYQKKL 171
>UniRef50_Q4SV68 Cluster: Chromosome undetermined SCAF13783, whole
genome shotgun sequence; n=2; Coelomata|Rep: Chromosome
undetermined SCAF13783, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 149
Score = 79.8 bits (188), Expect = 5e-14
Identities = 40/82 (48%), Positives = 49/82 (59%)
Frame = +3
Query: 369 RKXGAKLTXAEEAIINXXRSQKTARKYLAXQRLAKVEGALXEQFHTGRLLACVASRPGQC 548
R+ + T EE ++N RS+KT +KY AC+ASRPGQC
Sbjct: 64 RRAPSWYTPEEEEVLNKKRSKKTQKKYDERXXXXXXXXXXXXXXXXXXXXACIASRPGQC 123
Query: 549 GRADGYILQGKELEFYLXKIKS 614
GRADGYIL+GKELEFYL KIK+
Sbjct: 124 GRADGYILEGKELEFYLRKIKA 145
>UniRef50_Q8SWC9 Cluster: Ribosomal protein S8; n=1; Encephalitozoon
cuniculi|Rep: Ribosomal protein S8 - Encephalitozoon
cuniculi
Length = 173
Score = 75.8 bits (178), Expect = 8e-13
Identities = 34/67 (50%), Positives = 48/67 (71%)
Frame = +3
Query: 132 TPXRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVV 311
TP R RGGN KY+ALRLD G+F + + R +++ VVY+ S+NELVRT TL K+++V
Sbjct: 44 TPVRVRGGNRKYKALRLDMGHFKFITTGKFRMAKLLQVVYHPSSNELVRTNTLTKSSVVK 103
Query: 312 VDATPFR 332
+ A PF+
Sbjct: 104 ISAEPFK 110
Score = 52.0 bits (119), Expect = 1e-05
Identities = 23/44 (52%), Positives = 29/44 (65%)
Frame = +3
Query: 474 VEGALXEQFHTGRLLACVASRPGQCGRADGYILQGKELEFYLXK 605
V+ +L E F G L A + SRPGQ G A G++LQG EL+FY K
Sbjct: 120 VDPSLHESFEKGHLYAIITSRPGQVGMAQGHVLQGDELKFYADK 163
>UniRef50_A6RAQ0 Cluster: Ribosomal protein S8; n=1; Ajellomyces
capsulatus NAm1|Rep: Ribosomal protein S8 - Ajellomyces
capsulatus NAm1
Length = 141
Score = 64.1 bits (149), Expect = 3e-09
Identities = 30/47 (63%), Positives = 35/47 (74%)
Frame = +3
Query: 471 KVEGALXEQFHTGRLLACVASRPGQCGRADGYILQGKELEFYLXKIK 611
KVE AL +QF GRL A V+SRPGQ GR DGYIL+G+EL FY I+
Sbjct: 94 KVEPALEKQFEAGRLYAVVSSRPGQSGRVDGYILEGEELAFYQRAIR 140
Score = 53.6 bits (123), Expect = 4e-06
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = +3
Query: 141 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDV 245
R+RGGN K+R LRL++GNFSWGSE RK R+I V
Sbjct: 47 RTRGGNQKFRGLRLESGNFSWGSEGIARKVRVIVV 81
Score = 42.3 bits (95), Expect = 0.009
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2
Query: 50 KRAPIRKKRKYELGRPAANTRLGPQRIH 133
KR+ RKKR +E GR ANTR+GP+RIH
Sbjct: 17 KRSHYRKKRAFEKGRQPANTRIGPKRIH 44
>UniRef50_Q3LVX9 Cluster: Ribosomal protein S8; n=1; Bigelowiella
natans|Rep: Ribosomal protein S8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 176
Score = 58.4 bits (135), Expect = 1e-07
Identities = 24/63 (38%), Positives = 42/63 (66%)
Frame = +3
Query: 141 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDA 320
R RGGN K++A+ L G+F W + ++ ++I+ V+YN +N +LV+ + L K I+ +D+
Sbjct: 41 RVRGGNFKFKAISLGKGSFQWKTMQLSKNSKILSVLYNQANLKLVQKRNLSKGTIIKIDS 100
Query: 321 TPF 329
PF
Sbjct: 101 MPF 103
>UniRef50_A7Q5T2 Cluster: Chromosome chr14 scaffold_54, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr14 scaffold_54, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 110
Score = 51.6 bits (118), Expect = 1e-05
Identities = 36/92 (39%), Positives = 49/92 (53%)
Frame = +3
Query: 267 ELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKXGAKLTXAEEAIINXXRSQKTARK 446
ELVRT+TLVKNAI+ Q Y HY L +G K A T ++ + RK
Sbjct: 31 ELVRTQTLVKNAII--------QRYLQHYGLDIGCKKKASTTPRKKE----RKGNHVVRK 78
Query: 447 YLAXQRLAKVEGALXEQFHTGRLLACVASRPG 542
Q+ K++ + EQF +GRLLA ++S PG
Sbjct: 79 LEKRQQDHKLDPHIEEQFGSGRLLAAISSYPG 110
>UniRef50_A3CSQ2 Cluster: 30S ribosomal protein S8e; n=5;
Archaea|Rep: 30S ribosomal protein S8e - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 125
Score = 42.7 bits (96), Expect = 0.007
Identities = 24/56 (42%), Positives = 33/56 (58%)
Frame = +3
Query: 141 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIV 308
R+ GGN K RALRL+ S + T+KT+I V N+++ VR K L K AI+
Sbjct: 45 RTFGGNQKVRALRLEYATVSNPATGETKKTKIEAVEANSADPNYVRRKLLTKGAII 100
>UniRef50_Q9VL72 Cluster: CG5899-PA, isoform A; n=5; Diptera|Rep:
CG5899-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 844
Score = 35.9 bits (79), Expect = 0.77
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
Frame = +3
Query: 207 SECSTRKT----RIIDVVYNASNNELVRTKTLV-KNAIVVVDATPFRQWYESHYTLPLGR 371
SE ST+ T ++ + AS EL KTL K A+ ++D PF W + L R
Sbjct: 174 SEMSTKMTGQRKKVFQFMNEASLIELQSVKTLSEKKALAIIDVRPFSDWSDLRQKLESIR 233
Query: 372 KXGAKLTXAEEAI 410
G L A+E I
Sbjct: 234 MSGDLLNYAQELI 246
>UniRef50_Q3SAD8 Cluster: Putative uncharacterized protein; n=1;
uncultured euryarchaeote Alv-FOS1|Rep: Putative
uncharacterized protein - uncultured euryarchaeote
Alv-FOS1
Length = 484
Score = 35.1 bits (77), Expect = 1.3
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = +3
Query: 111 GSVLSVSTPXRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTL 290
GS L V+ ++ G + + L N +W + R + + V N + N R T+
Sbjct: 221 GSKLLVNATVKNMGTSPGWANLTFSIDNHTWSNNIYVRSEKTVHVALNVTRNGTFRLTTV 280
Query: 291 VKNAI 305
VKN I
Sbjct: 281 VKNDI 285
>UniRef50_Q8TV55 Cluster: 30S ribosomal protein S8e; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S8e -
Methanopyrus kandleri
Length = 133
Score = 35.1 bits (77), Expect = 1.3
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 38 PPAGKRAPIRKKRKYELGRPAANTRLGPQR 127
P G+ P RKKRK+E+G P T +G +R
Sbjct: 12 PTGGRIRPHRKKRKFEMGNPPTETLVGEER 41
>UniRef50_A6SGH0 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 316
Score = 34.3 bits (75), Expect = 2.3
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 11 VGITGISEGPPAGKRAPIRKKRKYELGRPAANTRLGPQRIHSXSF-TWWKY 160
+G+TG G PA ++ ++K++ + P T L P+ +S SF T W +
Sbjct: 10 MGLTGSLAGTPAPEKKQVKKRKSWGQQLPEPKTNLPPRYFNSSSFITQWHW 60
>UniRef50_Q6L0D3 Cluster: 30S ribosomal protein S8e; n=7;
Archaea|Rep: 30S ribosomal protein S8e - Picrophilus
torridus
Length = 125
Score = 33.9 bits (74), Expect = 3.1
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +2
Query: 38 PPAGKRAPIRKKRKYELGRPAANTRLGPQRI 130
P GK P KR+YELGR TRLG + +
Sbjct: 12 PSGGKLRPNHSKRRYELGREPTLTRLGDREL 42
Score = 33.9 bits (74), Expect = 3.1
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +3
Query: 141 RSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIV 308
RS GGN+K+ LR D N + +TRK +I V N+++ V+ + + ++
Sbjct: 46 RSYGGNSKFALLRCDYANVYNPKDKTTRKVKINTVKENSADPHYVQRNIMNRGTVI 101
>UniRef50_UPI0000F32D0C Cluster: Zinc finger CCCH domain-containing
protein 6.; n=1; Bos taurus|Rep: Zinc finger CCCH
domain-containing protein 6. - Bos Taurus
Length = 770
Score = 32.3 bits (70), Expect = 9.4
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +3
Query: 48 GNVRPYARRGSMS*GVPLQTPGSVLS 125
G + PYA + S S G+PL TPGSVLS
Sbjct: 604 GALPPYAPKLSSSTGLPLGTPGSVLS 629
>UniRef50_A7F1W3 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 622
Score = 32.3 bits (70), Expect = 9.4
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -1
Query: 271 NSLLDALYTTSMIRVLRVEHSDPQEKLPVS 182
N L D +Y T I +R EH DP++ LP S
Sbjct: 309 NLLFDTIYATPPIARVRSEHEDPRDNLPDS 338
>UniRef50_O58830 Cluster: 30S ribosomal protein S8e; n=6;
Archaea|Rep: 30S ribosomal protein S8e - Pyrococcus
horikoshii
Length = 127
Score = 32.3 bits (70), Expect = 9.4
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +2
Query: 38 PPAGKRAPIRKKRKYELGRPAANTRLGPQ 124
P G+ RKKRK ELGR +NTR+ Q
Sbjct: 12 PSGGRIVLARKKRKRELGREPSNTRVAEQ 40
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 600,300,715
Number of Sequences: 1657284
Number of extensions: 11436830
Number of successful extensions: 32081
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 30997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32064
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44392209541
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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