Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_E24
(616 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8 prot... 258 1e-68
BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8 pr... 258 1e-68
AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8 pr... 258 1e-68
AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8 pr... 258 1e-68
AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8 pr... 210 2e-54
BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal pr... 103 7e-22
BC037399-1|AAH37399.1| 446|Homo sapiens KIAA0415 protein protein. 30 7.5
BC008841-1|AAH08841.2| 391|Homo sapiens KIAA0415 protein protein. 30 7.5
AB007875-1|BAA24845.1| 634|Homo sapiens KIAA0415 protein. 30 7.5
AK127331-1|BAC86934.1| 178|Homo sapiens , member 1 (TRPV1). pr... 29 9.9
>X67247-1|CAA47670.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 258 bits (632), Expect = 1e-68
Identities = 125/190 (65%), Positives = 144/190 (75%), Gaps = 1/190 (0%)
Frame = +3
Query: 48 GNVRPYARRGSMS*GVPL-QTPGSVLSVSTPXRSRGGNTKYRALRLDTGNFSWGSECSTR 224
G +PY ++ G P T + T R RGGN KYRALRLD GNFSWGSEC TR
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHT-VRVRGGNKKYRALRLDVGNFSWGSECCTR 74
Query: 225 KTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKXGAKLTXAEE 404
KTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRK GAKLT EE
Sbjct: 75 KTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEE 134
Query: 405 AIINXXRSQKTARKYLAXQRLAKVEGALXEQFHTGRLLACVASRPGQCGRADGYILQGKE 584
I+N RS+K +KY ++ AK+ L EQF G+LLAC+ASRPGQCGRADGY+L+GKE
Sbjct: 135 EILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKE 194
Query: 585 LEFYLXKIKS 614
LEFYL KIK+
Sbjct: 195 LEFYLRKIKA 204
Score = 31.1 bits (67), Expect = 3.2
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 1 LGXSRDHWHKRRATG 45
+G SRD+WHKRR TG
Sbjct: 1 MGISRDNWHKRRKTG 15
>BC070875-1|AAH70875.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 258 bits (632), Expect = 1e-68
Identities = 125/190 (65%), Positives = 144/190 (75%), Gaps = 1/190 (0%)
Frame = +3
Query: 48 GNVRPYARRGSMS*GVPL-QTPGSVLSVSTPXRSRGGNTKYRALRLDTGNFSWGSECSTR 224
G +PY ++ G P T + T R RGGN KYRALRLD GNFSWGSEC TR
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHT-VRVRGGNKKYRALRLDVGNFSWGSECCTR 74
Query: 225 KTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKXGAKLTXAEE 404
KTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRK GAKLT EE
Sbjct: 75 KTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEE 134
Query: 405 AIINXXRSQKTARKYLAXQRLAKVEGALXEQFHTGRLLACVASRPGQCGRADGYILQGKE 584
I+N RS+K +KY ++ AK+ L EQF G+LLAC+ASRPGQCGRADGY+L+GKE
Sbjct: 135 EILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKE 194
Query: 585 LEFYLXKIKS 614
LEFYL KIK+
Sbjct: 195 LEFYLRKIKA 204
Score = 31.1 bits (67), Expect = 3.2
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 1 LGXSRDHWHKRRATG 45
+G SRD+WHKRR TG
Sbjct: 1 MGISRDNWHKRRKTG 15
>AL592166-7|CAI13003.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 258 bits (632), Expect = 1e-68
Identities = 125/190 (65%), Positives = 144/190 (75%), Gaps = 1/190 (0%)
Frame = +3
Query: 48 GNVRPYARRGSMS*GVPL-QTPGSVLSVSTPXRSRGGNTKYRALRLDTGNFSWGSECSTR 224
G +PY ++ G P T + T R RGGN KYRALRLD GNFSWGSEC TR
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHT-VRVRGGNKKYRALRLDVGNFSWGSECCTR 74
Query: 225 KTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKXGAKLTXAEE 404
KTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRK GAKLT EE
Sbjct: 75 KTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEE 134
Query: 405 AIINXXRSQKTARKYLAXQRLAKVEGALXEQFHTGRLLACVASRPGQCGRADGYILQGKE 584
I+N RS+K +KY ++ AK+ L EQF G+LLAC+ASRPGQCGRADGY+L+GKE
Sbjct: 135 EILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKE 194
Query: 585 LEFYLXKIKS 614
LEFYL KIK+
Sbjct: 195 LEFYLRKIKA 204
Score = 31.1 bits (67), Expect = 3.2
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 1 LGXSRDHWHKRRATG 45
+G SRD+WHKRR TG
Sbjct: 1 MGISRDNWHKRRKTG 15
>AB062401-1|BAB93488.1| 208|Homo sapiens ribosomal protein S8
protein.
Length = 208
Score = 258 bits (632), Expect = 1e-68
Identities = 125/190 (65%), Positives = 144/190 (75%), Gaps = 1/190 (0%)
Frame = +3
Query: 48 GNVRPYARRGSMS*GVPL-QTPGSVLSVSTPXRSRGGNTKYRALRLDTGNFSWGSECSTR 224
G +PY ++ G P T + T R RGGN KYRALRLD GNFSWGSEC TR
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHT-VRVRGGNKKYRALRLDVGNFSWGSECCTR 74
Query: 225 KTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRKXGAKLTXAEE 404
KTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQWYESHY LPLGRK GAKLT EE
Sbjct: 75 KTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQWYESHYALPLGRKKGAKLTPEEE 134
Query: 405 AIINXXRSQKTARKYLAXQRLAKVEGALXEQFHTGRLLACVASRPGQCGRADGYILQGKE 584
I+N RS+K +KY ++ AK+ L EQF G+LLAC+ASRPGQCGRADGY+L+GKE
Sbjct: 135 EILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGYVLEGKE 194
Query: 585 LEFYLXKIKS 614
LEFYL KIK+
Sbjct: 195 LEFYLRKIKA 204
Score = 31.1 bits (67), Expect = 3.2
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 1 LGXSRDHWHKRRATG 45
+G SRD+WHKRR TG
Sbjct: 1 MGISRDNWHKRRKTG 15
>AL592166-8|CAI13002.1| 188|Homo sapiens ribosomal protein S8
protein.
Length = 188
Score = 210 bits (514), Expect = 2e-54
Identities = 103/153 (67%), Positives = 119/153 (77%)
Frame = +3
Query: 156 NTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQ 335
NTK R+ T G C TRKTRIIDVVYNASNNELVRTKTLVKN IV++D+TP+RQ
Sbjct: 35 NTKIGPRRIHTVRVRGG--C-TRKTRIIDVVYNASNNELVRTKTLVKNCIVLIDSTPYRQ 91
Query: 336 WYESHYTLPLGRKXGAKLTXAEEAIINXXRSQKTARKYLAXQRLAKVEGALXEQFHTGRL 515
WYESHY LPLGRK GAKLT EE I+N RS+K +KY ++ AK+ L EQF G+L
Sbjct: 92 WYESHYALPLGRKKGAKLTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKL 151
Query: 516 LACVASRPGQCGRADGYILQGKELEFYLXKIKS 614
LAC+ASRPGQCGRADGY+L+GKELEFYL KIK+
Sbjct: 152 LACIASRPGQCGRADGYVLEGKELEFYLRKIKA 184
Score = 56.4 bits (130), Expect = 8e-08
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +2
Query: 47 GKRAPIRKKRKYELGRPAANTRLGPQRIHS 136
GKR P KKRKYELGRPAANT++GP+RIH+
Sbjct: 16 GKRKPYHKKRKYELGRPAANTKIGPRRIHT 45
Score = 31.1 bits (67), Expect = 3.2
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1
Query: 1 LGXSRDHWHKRRATG 45
+G SRD+WHKRR TG
Sbjct: 1 MGISRDNWHKRRKTG 15
>BC005678-1|AAH05678.1| 80|Homo sapiens Similar to ribosomal
protein S8 protein.
Length = 80
Score = 103 bits (246), Expect = 7e-22
Identities = 47/76 (61%), Positives = 58/76 (76%)
Frame = +3
Query: 387 LTXAEEAIINXXRSQKTARKYLAXQRLAKVEGALXEQFHTGRLLACVASRPGQCGRADGY 566
LT EE I+N RS+K +KY ++ AK+ L EQF G+LLAC+ASRPGQCGRADGY
Sbjct: 1 LTPEEEEILNKKRSKKIQKKYDERKKNAKISSLLEEQFQQGKLLACIASRPGQCGRADGY 60
Query: 567 ILQGKELEFYLXKIKS 614
+L+GKELEFYL KIK+
Sbjct: 61 VLEGKELEFYLRKIKA 76
>BC037399-1|AAH37399.1| 446|Homo sapiens KIAA0415 protein protein.
Length = 446
Score = 29.9 bits (64), Expect = 7.5
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -1
Query: 535 RLATQASKRPVWNCSXRAPSTL 470
R A AS+RP+W+ S RAPS L
Sbjct: 329 RSAPAASERPLWDTSLRAPSCL 350
>BC008841-1|AAH08841.2| 391|Homo sapiens KIAA0415 protein protein.
Length = 391
Score = 29.9 bits (64), Expect = 7.5
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -1
Query: 535 RLATQASKRPVWNCSXRAPSTL 470
R A AS+RP+W+ S RAPS L
Sbjct: 69 RSAPAASERPLWDTSLRAPSCL 90
>AB007875-1|BAA24845.1| 634|Homo sapiens KIAA0415 protein.
Length = 634
Score = 29.9 bits (64), Expect = 7.5
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = -1
Query: 535 RLATQASKRPVWNCSXRAPSTL 470
R A AS+RP+W+ S RAPS L
Sbjct: 506 RSAPAASERPLWDTSLRAPSCL 527
>AK127331-1|BAC86934.1| 178|Homo sapiens , member 1 (TRPV1).
protein.
Length = 178
Score = 29.5 bits (63), Expect = 9.9
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 297 NAIVVVDATPFRQWYESHYTLPLGRKXGAKLT 392
N I+ V TPF W + H++ P G LT
Sbjct: 5 NPIIAVFRTPFAPWLQFHWSAPFSAWLGTVLT 36
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,219,668
Number of Sequences: 237096
Number of extensions: 1916587
Number of successful extensions: 4286
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4282
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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