Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_E21
         (654 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1121 + 34262019-34262040,34262144-34262211,34262909-342630...    64   7e-11
02_05_0492 - 29476883-29476949,29477030-29477166,29477292-294773...    31   1.1  
02_01_0137 + 988442-988641,989088-989281,989369-989488,989594-98...    29   3.2  

>02_05_1121 +
           34262019-34262040,34262144-34262211,34262909-34263067,
           34263146-34263313,34264125-34264278,34264845-34264924,
           34265567-34265839,34265956-34266099,34266750-34266884,
           34266994-34267092,34267530-34267586,34267673-34267877,
           34268159-34268277,34268779-34268877,34268964-34269203
          Length = 673

 Score = 64.5 bits (150), Expect = 7e-11
 Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 2/125 (1%)
 Frame = +2

Query: 200 AMSAIEMMDPKMDAGMMCNRGTPKPLNFHQAVAADKLXIDN-IXPNELIGIIXATMACIV 376
           AMSA+E+MDPKMD G+  +            +A   L +D  +     + ++    +C  
Sbjct: 25  AMSALEIMDPKMDCGIEKSGYYSIDEAIEDGIAPVPLSLDRTLDIQRTLDVMDHLFSCEA 84

Query: 377 SWLEGHSLAQTVFTNLYL-HQPHSINNKILXAFCIAVYKLLDCIRXCINQAQVFEEXDFQ 553
           +W +GH+LAQTVFT +YL     + ++ IL +FC  +      +   ++ A+  EE D  
Sbjct: 85  TWHKGHTLAQTVFTCIYLMRMERTSSHAILNSFCRILRATCYAVVSVVSTARTHEEEDLF 144

Query: 554 PMGYG 568
            M +G
Sbjct: 145 TMSFG 149


>02_05_0492 -
           29476883-29476949,29477030-29477166,29477292-29477383,
           29477490-29477587,29477677-29477804,29477883-29478026,
           29478108-29478397,29478553-29478739,29479085-29479210,
           29480488-29480538,29480952-29481002,29482639-29484054
          Length = 928

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +3

Query: 372 LFPGWKDILLLRPFLLICTYISH 440
           +FP WK++ +    +++CTY SH
Sbjct: 903 IFPPWKEVKVKEETVILCTYFSH 925


>02_01_0137 + 988442-988641,989088-989281,989369-989488,989594-989673,
            990244-990510,990840-992458,992571-993327,993560-995506
          Length = 1727

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 17/49 (34%), Positives = 28/49 (57%)
 Frame = -2

Query: 212  LLTLLRRVQKGGHHEVTLLTADLLCI*RNQMLHRPSCRSLQEQQPEAPL 66
            LLT L++++   HH +  L A+L  +   + LH   CRS++ + PE  L
Sbjct: 1647 LLTSLQQLEFSNHHYLESLPANLRSLDSLEALHINGCRSIR-RLPEMGL 1694


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,367,034
Number of Sequences: 37544
Number of extensions: 301187
Number of successful extensions: 602
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 601
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)