Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_E21
         (654 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF022982-5|AAB69936.2|  799|Caenorhabditis elegans Hypothetical ...    53   2e-07

>AF022982-5|AAB69936.2|  799|Caenorhabditis elegans Hypothetical
           protein T23B12.4 protein.
          Length = 799

 Score = 53.2 bits (122), Expect = 2e-07
 Identities = 39/120 (32%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
 Frame = +2

Query: 203 MSAIEMMDPKMDAGMMCNRGTPKPLNFHQAVAADKLXIDNIXPNELIGIIXATMACIVSW 382
           MSAIE+ +PKMD G+    G+       +A++   L  D+  P +L  I+ +T+A +V+W
Sbjct: 42  MSAIELGEPKMDVGV----GSKHIKTLKEAISGG-LYADDY-PFQL-AIMDSTLAMVVAW 94

Query: 383 LEGHSLAQTVFTNLYLHQPHSINNKILXAFCIAVYKLLDCIRXCINQAQVFEE--XDFQP 556
           LEG +L  TV+TN+ L     + + +   F   V   +      IN     EE   DF P
Sbjct: 95  LEGSALGSTVWTNVLLSNVTFVKHPVFHPFASGVNLFIRNAHALINSVGNLEELPEDFNP 154


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,468,335
Number of Sequences: 27780
Number of extensions: 279529
Number of successful extensions: 583
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 582
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)