Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_E20
(644 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 194 5e-50
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 192 2e-49
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 184 4e-47
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 180 9e-46
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 175 2e-44
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 156 2e-38
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 140 1e-33
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 85 6e-17
08_02_1528 + 27666356-27667081 29 4.2
06_03_1237 + 28602250-28604196 29 4.2
03_01_0522 - 3919120-3919696,3919835-3919919,3919955-3919985,392... 29 4.2
09_02_0513 - 10105746-10106438,10106523-10107040,10107156-101076... 28 5.5
07_03_1647 + 28370226-28370369,28370452-28370611,28370704-283708... 27 9.7
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 194 bits (473), Expect = 5e-50
Identities = 99/190 (52%), Positives = 130/190 (68%), Gaps = 4/190 (2%)
Frame = +1
Query: 76 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVX 249
S + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+
Sbjct: 220 SQPAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 279
Query: 250 ARRSSWRVISSIEQK--TXGSERKQQMAKEYXVKVQKELXXICYDVLGLLDKHLIPKASN 423
ARR+SWR+ISSIEQK + G+E + + KEY K++ EL IC +L LLD HL+P ++
Sbjct: 280 ARRASWRIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDGILKLLDSHLVPSSTA 339
Query: 424 PXSKVFYLKMKGDYYRYLAQVATGXTXHSVVQDSQKAYQDAFEISKAKMQPTHPIXAGSG 603
P SKVFYLKMKGDYYRYLA+ TG +++ AY+ A +I+ A++ PTHPI G
Sbjct: 340 PESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLA 399
Query: 604 VKFLSLYYEI 633
+ F YYEI
Sbjct: 400 LNFSVFYYEI 409
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 192 bits (468), Expect = 2e-49
Identities = 97/190 (51%), Positives = 131/190 (68%), Gaps = 4/190 (2%)
Frame = +1
Query: 76 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVX 249
S+ + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+
Sbjct: 2 SAQAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 61
Query: 250 ARRSSWRVISSIEQK--TXGSERKQQMAKEYXVKVQKELXXICYDVLGLLDKHLIPKASN 423
ARR+SWR+ISSIEQK + G+E + + K+Y K++ EL IC +L LL+ HL+P ++
Sbjct: 62 ARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTA 121
Query: 424 PXSKVFYLKMKGDYYRYLAQVATGXTXHSVVQDSQKAYQDAFEISKAKMQPTHPIXAGSG 603
P SKVFYLKMKGDYYRYLA+ TG +++ AY+ A +I+ A++ PTHPI G
Sbjct: 122 PESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLA 181
Query: 604 VKFLSLYYEI 633
+ F YYEI
Sbjct: 182 LNFSVFYYEI 191
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 184 bits (449), Expect = 4e-47
Identities = 95/185 (51%), Positives = 124/185 (67%), Gaps = 4/185 (2%)
Frame = +1
Query: 91 VDKEELVQRAKLAEQAERYDDMAAAMKEVTETG--VELSNEERNLLSVAYKNVVXARRSS 264
+ +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+ ARR+S
Sbjct: 1 MSREENVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRAS 60
Query: 265 WRVISSIEQKTXG--SERKQQMAKEYXVKVQKELXXICYDVLGLLDKHLIPKASNPXSKV 438
WR++SSIEQK G +E + KEY K++ EL IC +L LLD HL+P ++ SKV
Sbjct: 61 WRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAAESKV 120
Query: 439 FYLKMKGDYYRYLAQVATGXTXHSVVQDSQKAYQDAFEISKAKMQPTHPIXAGSGVKFLS 618
FYLKMKGDY+RYLA+ TG + + AY+ A +I+ A + PTHPI G + F
Sbjct: 121 FYLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIALADLAPTHPIRLGLALNFSV 180
Query: 619 LYYEI 633
YYEI
Sbjct: 181 FYYEI 185
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 180 bits (438), Expect = 9e-46
Identities = 95/189 (50%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Frame = +1
Query: 79 STMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGV--ELSNEERNLLSVAYKNVVXA 252
S +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+ A
Sbjct: 2 SPAEASREENVYMAKLAEQAERYEEMVEFMEKVAKTTDVGELTVEERNLLSVAYKNVIGA 61
Query: 253 RRSSWRVISSIEQK--TXGSERKQQMAKEYXVKVQKELXXICYDVLGLLDKHLIPKASNP 426
RR+SWR+ISSIEQK + G+E KEY +++ EL IC +L LLD HL+P A+
Sbjct: 62 RRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLLDSHLVPSATAA 121
Query: 427 XSKVFYLKMKGDYYRYLAQVATGXTXHSVVQDSQKAYQDAFEISKAKMQPTHPIXAGSGV 606
SKVFYLKMKGDY+RYLA+ +G +++ AY+ A +I+ A + THPI G +
Sbjct: 122 ESKVFYLKMKGDYHRYLAEFKSGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLAL 181
Query: 607 KFLSLYYEI 633
F YYEI
Sbjct: 182 NFSVFYYEI 190
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 175 bits (426), Expect = 2e-44
Identities = 92/186 (49%), Positives = 120/186 (64%), Gaps = 7/186 (3%)
Frame = +1
Query: 97 KEELVQRAKLAEQAERYDDMAAAMKEVTET-----GVELSNEERNLLSVAYKNVVXARRS 261
+EE+V AKLAEQAERY++M M++V G EL+ EERNLLSVAYKNV+ ARR+
Sbjct: 10 REEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSVAYKNVIGARRA 69
Query: 262 SWRVISSIEQKTXG--SERKQQMAKEYXVKVQKELXXICYDVLGLLDKHLIPKASNPXSK 435
SWR++SSIEQK G + A+ Y +V+ EL IC +L LLD+ L+P A+ +K
Sbjct: 70 SWRIVSSIEQKEEGRGAAGHAAAARSYRARVEAELSNICAGILRLLDERLVPAAAAVDAK 129
Query: 436 VFYLKMKGDYYRYLAQVATGXTXHSVVQDSQKAYQDAFEISKAKMQPTHPIXAGSGVKFL 615
VFYLKMKGDY+RYLA+ TG + AYQ A +I+ ++ PTHPI G + F
Sbjct: 130 VFYLKMKGDYHRYLAEFKTGAERKDAADATLAAYQAAQDIAMKELSPTHPIRLGLALNFS 189
Query: 616 SLYYEI 633
YYEI
Sbjct: 190 VFYYEI 195
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 156 bits (378), Expect = 2e-38
Identities = 78/151 (51%), Positives = 97/151 (64%), Gaps = 2/151 (1%)
Frame = +1
Query: 187 GVELSNEERNLLSVAYKNVVXARRSSWRVISSIEQKTXGSERKQQMA--KEYXVKVQKEL 360
G EL+ EERNLLSVAYKNV+ ARR+SWR+ISSIEQK G A + Y K++ EL
Sbjct: 18 GEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNDAHAATIRSYRGKIEAEL 77
Query: 361 XXICYDVLGLLDKHLIPKASNPXSKVFYLKMKGDYYRYLAQVATGXTXHSVVQDSQKAYQ 540
IC +L LLD HL+P A SKVFYLKMKGDY+RYLA+ +G + + AY+
Sbjct: 78 ARICDGILALLDSHLVPSAGAAESKVFYLKMKGDYHRYLAEFKSGDERKQAAESTMNAYK 137
Query: 541 DAFEISKAKMQPTHPIXAGSGVKFLSLYYEI 633
A +I+ A + PTHPI G + F YYEI
Sbjct: 138 AAQDIALADLAPTHPIRLGLALNFSVFYYEI 168
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 140 bits (338), Expect = 1e-33
Identities = 66/149 (44%), Positives = 95/149 (63%)
Frame = +1
Query: 94 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVXARRSSWRV 273
++E++V+ AKLAEQAERYDDM MK + V++S EER L SV +K + ARR+SWR+
Sbjct: 3 EREKVVRLAKLAEQAERYDDMVEFMKTLARMDVDMSAEERLLFSVGFKKTIGARRASWRI 62
Query: 274 ISSIEQKTXGSERKQQMAKEYXVKVQKELXXICYDVLGLLDKHLIPKASNPXSKVFYLKM 453
+ S+EQK ++ Y KV+ EL +C +VL ++ H +P A++ + VF+ KM
Sbjct: 63 LESLEQKVTAGDQPGVTINGYKKKVEDELRAVCNEVLSIIAIHCLPLANSGENVVFFYKM 122
Query: 454 KGDYYRYLAQVATGXTXHSVVQDSQKAYQ 540
KGDYYRYLA+ +TG + S AYQ
Sbjct: 123 KGDYYRYLAEFSTGTEKKAATDQSLMAYQ 151
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 84.6 bits (200), Expect = 6e-17
Identities = 52/131 (39%), Positives = 71/131 (54%), Gaps = 2/131 (1%)
Frame = +1
Query: 154 MAAAMKEVTETGVELSNEERNLLSVAYKNVVXARRSSWRVISSIE--QKTXGSERKQQMA 327
M AM V + L+ EERNLLSV YKN++ A+R++ R+I SIE ++T G E +
Sbjct: 1 MVEAMNSVAKLDEGLTKEERNLLSVGYKNLIGAKRAAMRIIGSIELKEETKGKESHVRQT 60
Query: 328 KEYXVKVQKELXXICYDVLGLLDKHLIPKASNPXSKVFYLKMKGDYYRYLAQVATGXTXH 507
EY KV+ E+ IC DV+ ++DK KGDYYRYLA+ TG
Sbjct: 61 AEYRRKVEAEMDKICCDVINIIDK------------------KGDYYRYLAEFKTGTEKI 102
Query: 508 SVVQDSQKAYQ 540
V + S AY+
Sbjct: 103 EVSELSLNAYE 113
>08_02_1528 + 27666356-27667081
Length = 241
Score = 28.7 bits (61), Expect = 4.2
Identities = 20/88 (22%), Positives = 35/88 (39%), Gaps = 1/88 (1%)
Frame = +1
Query: 82 TMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVXARRS 261
T V K+ K A + + + E E + + +LLS K + + S
Sbjct: 130 TKKVQKQSKKISKKSASAEQEGSRVIKLLAEAREVAISMLESSSHLLS---KKITTSNSS 186
Query: 262 SWRVISSIEQKT-XGSERKQQMAKEYXV 342
W ++S QKT + +Q A E+ +
Sbjct: 187 KWSLVSKAFQKTRLACQEEQLQALEFAI 214
>06_03_1237 + 28602250-28604196
Length = 648
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/71 (23%), Positives = 34/71 (47%)
Frame = +1
Query: 385 GLLDKHLIPKASNPXSKVFYLKMKGDYYRYLAQVATGXTXHSVVQDSQKAYQDAFEISKA 564
GL+D + + SKVFY + + Y Y + +A G H ++ +++ +++A
Sbjct: 314 GLVDMYAKCGLIDEASKVFYGMQEKNVYTYSSMIA-GLASHGRASEAIALFKEM--VNRA 370
Query: 565 KMQPTHPIXAG 597
++P H G
Sbjct: 371 NVEPNHVTFIG 381
>03_01_0522 -
3919120-3919696,3919835-3919919,3919955-3919985,
3920078-3920158,3920271-3920338,3920645-3920698,
3921023-3922379
Length = 750
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1
Query: 557 LISKASWYAFCESCTT 510
++S SW AFCESC T
Sbjct: 500 MVSCTSWLAFCESCQT 515
>09_02_0513 -
10105746-10106438,10106523-10107040,10107156-10107695,
10107791-10108103
Length = 687
Score = 28.3 bits (60), Expect = 5.5
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +1
Query: 61 ISSLPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVA 231
I S+PS+ DKE L +A + D + +KE ++ + NE RN+L +A
Sbjct: 325 IQSMPSAMYIPDKEGLTP-LHVAAKMGHLDVIQDMLKECPDSAELVDNEGRNILHLA 380
>07_03_1647 +
28370226-28370369,28370452-28370611,28370704-28370831,
28372512-28372628,28372729-28372782,28372985-28373075,
28373517-28373688,28374452-28374573,28374726-28374817,
28375331-28375373,28375596-28375656,28376367-28376515,
28376659-28376729,28376805-28376975,28377056-28377124,
28377427-28377528,28377629-28377697,28378060-28378138,
28378238-28378337,28378438-28378513,28378715-28378894,
28379430-28379552,28379634-28379717,28380068-28380252,
28380339-28380477,28380585-28380644,28380926-28381030,
28381332-28381445
Length = 1019
Score = 27.5 bits (58), Expect = 9.7
Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 2/100 (2%)
Frame = +1
Query: 202 NEERNLLSVAYKNVVXARRSSW-RVISSIEQKTXGSERKQQMAKEYXVKVQKELXXICYD 378
N + LLS AY N+ W + ISS+ Q+ S ++ Y + K L
Sbjct: 291 NTKNALLSSAYVNLCCKESIKWTKHISSLCQRVLLSGPAG--SEIYQESLVKALTKHFGA 348
Query: 379 VLGLLDKHLIPKASNPXSKVFYLKMKGDYYRYLAQV-ATG 495
L ++D L+ + SK KGD RY+ V +TG
Sbjct: 349 KLLIIDPSLLASGQSSKSKESESYKKGDRVRYIGSVQSTG 388
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,586,659
Number of Sequences: 37544
Number of extensions: 309112
Number of successful extensions: 836
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 818
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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