Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_E18
(649 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical pr... 84 7e-17
U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein. 84 7e-17
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 65 4e-11
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 65 4e-11
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 64 8e-11
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 62 3e-10
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 62 3e-10
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 62 3e-10
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 62 3e-10
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 62 3e-10
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 62 3e-10
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 62 3e-10
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 58 4e-09
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 55 5e-08
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 54 1e-07
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 54 1e-07
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 54 1e-07
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 53 2e-07
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 53 2e-07
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 50 1e-06
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 50 1e-06
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 50 1e-06
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 48 6e-06
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 48 8e-06
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 48 8e-06
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 48 8e-06
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 48 8e-06
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 48 8e-06
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 47 1e-05
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 46 2e-05
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 45 5e-05
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 45 5e-05
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 45 5e-05
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 44 7e-05
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 44 7e-05
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 44 7e-05
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 44 7e-05
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 44 1e-04
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 44 1e-04
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 41 9e-04
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 40 0.002
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 40 0.002
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 40 0.002
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 40 0.002
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 38 0.005
AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger t... 38 0.006
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 38 0.008
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 38 0.008
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 37 0.011
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 37 0.011
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 36 0.019
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 36 0.025
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 36 0.025
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 36 0.025
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 36 0.033
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 36 0.033
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 36 0.033
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 35 0.043
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 35 0.043
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 35 0.043
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 35 0.043
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 35 0.057
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 35 0.057
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 35 0.057
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 35 0.057
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 34 0.076
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 34 0.076
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 34 0.076
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 34 0.076
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 34 0.076
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 34 0.100
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 34 0.100
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 34 0.100
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 34 0.100
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 33 0.13
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 33 0.13
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 33 0.13
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 33 0.23
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 33 0.23
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 33 0.23
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 33 0.23
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 32 0.30
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 32 0.30
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 31 0.93
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 30 1.2
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 29 2.1
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 29 2.1
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 29 2.1
AC024845-1|AAF60850.2| 347|Caenorhabditis elegans Hypothetical ... 29 2.1
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 29 2.1
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 29 2.1
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 29 2.1
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 29 3.8
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 28 5.0
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 28 6.6
AC006801-2|AAF60751.1| 914|Caenorhabditis elegans Hypothetical ... 27 8.7
>Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical
protein ZK863.7 protein.
Length = 305
Score = 84.2 bits (199), Expect = 7e-17
Identities = 38/88 (43%), Positives = 59/88 (67%)
Frame = +1
Query: 382 TKIFVGNLTDKTRAPEVRELFXKFGTVVECDIVRNYGFVHLDATGDVNDAIKXLNGMMVD 561
+K+FVGNL D + +++++F F V ECDIV+NY FVH++ DV+ I L G +D
Sbjct: 3 SKLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIE-EDDVDPIITRLTGYTID 61
Query: 562 GQPMKVQLSTSRVRQRPGMGXPEQCYRC 645
G+ + ++ STS++R PGM P +C+RC
Sbjct: 62 GKVVNIKKSTSKLRPTPGM--PNRCFRC 87
Score = 54.8 bits (126), Expect = 5e-08
Identities = 29/94 (30%), Positives = 45/94 (47%)
Frame = +1
Query: 148 KIFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRNYGFVHMENEQVGREAIQNLNGELVHG 327
K+F+GNL D L+ +F+ + V CDIV+NY FVH+E + V I L G + G
Sbjct: 4 KLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIEEDDVD-PIITRLTGYTIDG 62
Query: 328 QXXXXXXXXSRKAPSTPTTKIFVGNLTDKTRAPE 429
+ S+ P+ +D+ R P+
Sbjct: 63 KVVNIKKSTSKLRPTPGMPNRCFRCQSDEHRTPQ 96
>U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein.
Length = 305
Score = 84.2 bits (199), Expect = 7e-17
Identities = 38/88 (43%), Positives = 59/88 (67%)
Frame = +1
Query: 382 TKIFVGNLTDKTRAPEVRELFXKFGTVVECDIVRNYGFVHLDATGDVNDAIKXLNGMMVD 561
+K+FVGNL D + +++++F F V ECDIV+NY FVH++ DV+ I L G +D
Sbjct: 3 SKLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIE-EDDVDPIITRLTGYTID 61
Query: 562 GQPMKVQLSTSRVRQRPGMGXPEQCYRC 645
G+ + ++ STS++R PGM P +C+RC
Sbjct: 62 GKVVNIKKSTSKLRPTPGM--PNRCFRC 87
Score = 54.8 bits (126), Expect = 5e-08
Identities = 29/94 (30%), Positives = 45/94 (47%)
Frame = +1
Query: 148 KIFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRNYGFVHMENEQVGREAIQNLNGELVHG 327
K+F+GNL D L+ +F+ + V CDIV+NY FVH+E + V I L G + G
Sbjct: 4 KLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIEEDDVD-PIITRLTGYTIDG 62
Query: 328 QXXXXXXXXSRKAPSTPTTKIFVGNLTDKTRAPE 429
+ S+ P+ +D+ R P+
Sbjct: 63 KVVNIKKSTSKLRPTPGMPNRCFRCQSDEHRTPQ 96
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 65.3 bits (152), Expect = 4e-11
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 20/173 (11%)
Frame = +1
Query: 127 MPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVXCDIV-------RNYGFVHMENEQVG 285
M +G IFI NL + F +G ++ C + + YGFVH E E+
Sbjct: 51 MRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAA 110
Query: 286 REAIQNLNGELVHGQXXXXXXXXSRK-------APSTPTTKIFVGNLTDKTRAPEVRELF 444
+ AIQ +NG L+ G+ R + T ++V N D + +LF
Sbjct: 111 QNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLF 170
Query: 445 XKFGTVVECDIV------RNYGFVHLDATGDVNDAIKXLNGMMVDGQPMKVQL 585
KFG + C+++ + +GFV + A++ L+ ++G +K+ +
Sbjct: 171 AKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHV 223
Score = 42.3 bits (95), Expect = 3e-04
Identities = 29/120 (24%), Positives = 55/120 (45%), Gaps = 10/120 (8%)
Frame = +1
Query: 292 AIQNLNGELVHGQXXXXXXXXSRKAPSTPTT---KIFVGNLTDKTRAPEVRELFXKFGTV 462
A+ +N E +HG+ S++ P+ + IF+ NL + + F FG +
Sbjct: 26 AMDTMNFEALHGKPMRIMW--SQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNI 83
Query: 463 VECDIV-------RNYGFVHLDATGDVNDAIKXLNGMMVDGQPMKVQLSTSRVRQRPGMG 621
+ C + + YGFVH + +AI+ +NGM++ G+ + V R ++ +G
Sbjct: 84 LSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELG 143
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 65.3 bits (152), Expect = 4e-11
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 20/173 (11%)
Frame = +1
Query: 127 MPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVXCDIV-------RNYGFVHMENEQVG 285
M +G IFI NL + F +G ++ C + + YGFVH E E+
Sbjct: 114 MRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAA 173
Query: 286 REAIQNLNGELVHGQXXXXXXXXSRK-------APSTPTTKIFVGNLTDKTRAPEVRELF 444
+ AIQ +NG L+ G+ R + T ++V N D + +LF
Sbjct: 174 QNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLF 233
Query: 445 XKFGTVVECDIV------RNYGFVHLDATGDVNDAIKXLNGMMVDGQPMKVQL 585
KFG + C+++ + +GFV + A++ L+ ++G +K+ +
Sbjct: 234 AKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHV 286
Score = 50.8 bits (116), Expect = 8e-07
Identities = 39/175 (22%), Positives = 76/175 (43%), Gaps = 18/175 (10%)
Frame = +1
Query: 151 IFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRN--------YGFVHMENEQVGREAIQNL 306
+++G+L E+ L F G V+ + R+ Y +V+ + A+ +
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 307 NGELVHGQXXXXXXXXSRKAPSTPTT---KIFVGNLTDKTRAPEVRELFXKFGTVVECDI 477
N E +HG+ S++ P+ + IF+ NL + + F FG ++ C +
Sbjct: 94 NFEALHGKPMRIMW--SQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKV 151
Query: 478 V-------RNYGFVHLDATGDVNDAIKXLNGMMVDGQPMKVQLSTSRVRQRPGMG 621
+ YGFVH + +AI+ +NGM++ G+ + V R ++ +G
Sbjct: 152 AIDEDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELG 206
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 64.1 bits (149), Expect = 8e-11
Identities = 41/173 (23%), Positives = 74/173 (42%), Gaps = 20/173 (11%)
Frame = +1
Query: 127 MPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVXCDIV-------RNYGFVHMENEQVG 285
M +G IFI NL + F +G ++ C + + YGFVH E E+
Sbjct: 114 MRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAA 173
Query: 286 REAIQNLNGELVHGQXXXXXXXXSRK-------APSTPTTKIFVGNLTDKTRAPEVRELF 444
+ AIQ +NG L+ G+ R + T ++V N D + ++F
Sbjct: 174 QNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKVF 233
Query: 445 XKFGTVVECDIV------RNYGFVHLDATGDVNDAIKXLNGMMVDGQPMKVQL 585
KFG + C+++ + +GFV + A++ L+ ++G +K+ +
Sbjct: 234 AKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHV 286
Score = 50.8 bits (116), Expect = 8e-07
Identities = 39/175 (22%), Positives = 76/175 (43%), Gaps = 18/175 (10%)
Frame = +1
Query: 151 IFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRN--------YGFVHMENEQVGREAIQNL 306
+++G+L E+ L F G V+ + R+ Y +V+ + A+ +
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 307 NGELVHGQXXXXXXXXSRKAPSTPTT---KIFVGNLTDKTRAPEVRELFXKFGTVVECDI 477
N E +HG+ S++ P+ + IF+ NL + + F FG ++ C +
Sbjct: 94 NFEALHGKPMRIMW--SQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKV 151
Query: 478 V-------RNYGFVHLDATGDVNDAIKXLNGMMVDGQPMKVQLSTSRVRQRPGMG 621
+ YGFVH + +AI+ +NGM++ G+ + V R ++ +G
Sbjct: 152 AIDEDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELG 206
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 62.1 bits (144), Expect = 3e-10
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 11/136 (8%)
Frame = +1
Query: 112 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRNYG-----------F 258
+P P T K+F+G + + E D R LFEKYG+V C+I+R+ F
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Query: 259 VHMENEQVGREAIQNLNGELVHGQXXXXXXXXSRKAPSTPTTKIFVGNLTDKTRAPEVRE 438
H ++ + A+ N+ +++ G + + K+F+G L+ K +RE
Sbjct: 104 YHRKDAIEAQGALHNI--KVIEGMHHPVQMKPA-DTENRNERKLFIGQLSKKHNEENLRE 160
Query: 439 LFXKFGTVVECDIVRN 486
+F KFG + +C ++R+
Sbjct: 161 IFAKFGHIEDCSVLRD 176
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 487 YGFVHLDATGDVNDAIKXLNGMMVDGQPMKVQLSTSR 597
+GFV + +AI +NG + + +KVQL R
Sbjct: 542 FGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVDR 578
Score = 27.5 bits (58), Expect = 8.7
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 8/62 (12%)
Frame = +1
Query: 151 IFIGNLSDKTTEADLRPLFEKYGTV----VXCDIVRN----YGFVHMENEQVGREAIQNL 306
+FI +L ++DL F +G + V D V N +GFV EN Q AI +
Sbjct: 501 LFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAM 560
Query: 307 NG 312
NG
Sbjct: 561 NG 562
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 62.1 bits (144), Expect = 3e-10
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 11/136 (8%)
Frame = +1
Query: 112 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRNYG-----------F 258
+P P T K+F+G + + E D R LFEKYG+V C+I+R+ F
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Query: 259 VHMENEQVGREAIQNLNGELVHGQXXXXXXXXSRKAPSTPTTKIFVGNLTDKTRAPEVRE 438
H ++ + A+ N+ +++ G + + K+F+G L+ K +RE
Sbjct: 104 YHRKDAIEAQGALHNI--KVIEGMHHPVQMKPA-DTENRNERKLFIGQLSKKHNEENLRE 160
Query: 439 LFXKFGTVVECDIVRN 486
+F KFG + +C ++R+
Sbjct: 161 IFAKFGHIEDCSVLRD 176
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 487 YGFVHLDATGDVNDAIKXLNGMMVDGQPMKVQLSTSR 597
+GFV + +AI +NG + + +KVQL R
Sbjct: 542 FGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVDR 578
Score = 27.5 bits (58), Expect = 8.7
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 8/62 (12%)
Frame = +1
Query: 151 IFIGNLSDKTTEADLRPLFEKYGTV----VXCDIVRN----YGFVHMENEQVGREAIQNL 306
+FI +L ++DL F +G + V D V N +GFV EN Q AI +
Sbjct: 501 LFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAM 560
Query: 307 NG 312
NG
Sbjct: 561 NG 562
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 62.1 bits (144), Expect = 3e-10
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 11/136 (8%)
Frame = +1
Query: 112 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRNYG-----------F 258
+P P T K+F+G + + E D R LFEKYG+V C+I+R+ F
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Query: 259 VHMENEQVGREAIQNLNGELVHGQXXXXXXXXSRKAPSTPTTKIFVGNLTDKTRAPEVRE 438
H ++ + A+ N+ +++ G + + K+F+G L+ K +RE
Sbjct: 104 YHRKDAIEAQGALHNI--KVIEGMHHPVQMKPA-DTENRNERKLFIGQLSKKHNEENLRE 160
Query: 439 LFXKFGTVVECDIVRN 486
+F KFG + +C ++R+
Sbjct: 161 IFAKFGHIEDCSVLRD 176
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 487 YGFVHLDATGDVNDAIKXLNGMMVDGQPMKVQLSTSR 597
+GFV + +AI +NG + + +KVQL R
Sbjct: 471 FGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVDR 507
Score = 27.5 bits (58), Expect = 8.7
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 8/62 (12%)
Frame = +1
Query: 151 IFIGNLSDKTTEADLRPLFEKYGTV----VXCDIVRN----YGFVHMENEQVGREAIQNL 306
+FI +L ++DL F +G + V D V N +GFV EN Q AI +
Sbjct: 430 LFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAM 489
Query: 307 NG 312
NG
Sbjct: 490 NG 491
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 62.1 bits (144), Expect = 3e-10
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 11/136 (8%)
Frame = +1
Query: 112 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRNYG-----------F 258
+P P T K+F+G + + E D R LFEKYG+V C+I+R+ F
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Query: 259 VHMENEQVGREAIQNLNGELVHGQXXXXXXXXSRKAPSTPTTKIFVGNLTDKTRAPEVRE 438
H ++ + A+ N+ +++ G + + K+F+G L+ K +RE
Sbjct: 104 YHRKDAIEAQGALHNI--KVIEGMHHPVQMKPA-DTENRNERKLFIGQLSKKHNEENLRE 160
Query: 439 LFXKFGTVVECDIVRN 486
+F KFG + +C ++R+
Sbjct: 161 IFAKFGHIEDCSVLRD 176
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 62.1 bits (144), Expect = 3e-10
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 11/136 (8%)
Frame = +1
Query: 112 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRNYG-----------F 258
+P P T K+F+G + + E D R LFEKYG+V C+I+R+ F
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Query: 259 VHMENEQVGREAIQNLNGELVHGQXXXXXXXXSRKAPSTPTTKIFVGNLTDKTRAPEVRE 438
H ++ + A+ N+ +++ G + + K+F+G L+ K +RE
Sbjct: 104 YHRKDAIEAQGALHNI--KVIEGMHHPVQMKPA-DTENRNERKLFIGQLSKKHNEENLRE 160
Query: 439 LFXKFGTVVECDIVRN 486
+F KFG + +C ++R+
Sbjct: 161 IFAKFGHIEDCSVLRD 176
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 62.1 bits (144), Expect = 3e-10
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 11/136 (8%)
Frame = +1
Query: 112 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRNYG-----------F 258
+P P T K+F+G + + E D R LFEKYG+V C+I+R+ F
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Query: 259 VHMENEQVGREAIQNLNGELVHGQXXXXXXXXSRKAPSTPTTKIFVGNLTDKTRAPEVRE 438
H ++ + A+ N+ +++ G + + K+F+G L+ K +RE
Sbjct: 104 YHRKDAIEAQGALHNI--KVIEGMHHPVQMKPA-DTENRNERKLFIGQLSKKHNEENLRE 160
Query: 439 LFXKFGTVVECDIVRN 486
+F KFG + +C ++R+
Sbjct: 161 IFAKFGHIEDCSVLRD 176
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 62.1 bits (144), Expect = 3e-10
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 11/136 (8%)
Frame = +1
Query: 112 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRNYG-----------F 258
+P P T K+F+G + + E D R LFEKYG+V C+I+R+ F
Sbjct: 44 SPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
Query: 259 VHMENEQVGREAIQNLNGELVHGQXXXXXXXXSRKAPSTPTTKIFVGNLTDKTRAPEVRE 438
H ++ + A+ N+ +++ G + + K+F+G L+ K +RE
Sbjct: 104 YHRKDAIEAQGALHNI--KVIEGMHHPVQMKPA-DTENRNERKLFIGQLSKKHNEENLRE 160
Query: 439 LFXKFGTVVECDIVRN 486
+F KFG + +C ++R+
Sbjct: 161 IFAKFGHIEDCSVLRD 176
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 487 YGFVHLDATGDVNDAIKXLNGMMVDGQPMKVQLSTSR 597
+GFV + +AI +NG + + +KVQL R
Sbjct: 542 FGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVDR 578
Score = 27.5 bits (58), Expect = 8.7
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 8/62 (12%)
Frame = +1
Query: 151 IFIGNLSDKTTEADLRPLFEKYGTV----VXCDIVRN----YGFVHMENEQVGREAIQNL 306
+FI +L ++DL F +G + V D V N +GFV EN Q AI +
Sbjct: 501 LFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAM 560
Query: 307 NG 312
NG
Sbjct: 561 NG 562
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 58.4 bits (135), Expect = 4e-09
Identities = 47/182 (25%), Positives = 80/182 (43%), Gaps = 26/182 (14%)
Frame = +1
Query: 145 FKIFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRN--------YGFVHMENEQVGREAIQ 300
F +F+G+LS + L+ F K+G V ++R+ YGFV N+Q AI
Sbjct: 135 FHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIA 194
Query: 301 NLNGELVHGQXXXXXXXXSRK----------------APSTPTTKIFVGNLTDKTRAPEV 432
+NG+ + G+ +RK + T ++VGN++ +T ++
Sbjct: 195 GMNGKWI-GKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTTDADL 253
Query: 433 RELFXKFGTVVECDI--VRNYGFVHLDATGDVNDAIKXLNGMMVDGQPMKVQLSTSRVRQ 606
R+LF +G + E I + Y FV + AI +NG + G +V+ S R +
Sbjct: 254 RDLFSTYGDIAEVRIFKTQRYAFVRYEKKECATKAIMEMNGKEMAGN--QVRCSWGRTQA 311
Query: 607 RP 612
P
Sbjct: 312 VP 313
Score = 52.0 bits (119), Expect = 4e-07
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = +1
Query: 151 IFIGNLSDKTTEADLRPLFEKYGTVVXCDI--VRNYGFVHMENEQVGREAIQNLNGELVH 324
+++GN+S +TT+ADLR LF YG + I + Y FV E ++ +AI +NG+ +
Sbjct: 239 VYVGNISQQTTDADLRDLFSTYGDIAEVRIFKTQRYAFVRYEKKECATKAIMEMNGKEMA 298
Query: 325 GQXXXXXXXXSRKAPS 372
G ++ P+
Sbjct: 299 GNQVRCSWGRTQAVPN 314
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 54.8 bits (126), Expect = 5e-08
Identities = 47/170 (27%), Positives = 74/170 (43%), Gaps = 21/170 (12%)
Frame = +1
Query: 151 IFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRN-----YGFVHMENEQVGREAIQNLNG- 312
+F+ NL T+ L LF + G V+ I+ Y FV + A+Q+ NG
Sbjct: 42 LFVANLDPAITDEFLATLFNQIGAVMKAKIIFEGLNDPYAFVEFSDHNQATLALQSHNGR 101
Query: 313 ELVHGQXXXXXXXXSRKAP---STPTTK----IFVGNLTDKTRAPEVRELFXKFGTVVEC 471
EL+ + R+ S P T +FVG+L + + ++RE F KFG V E
Sbjct: 102 ELLEKEMHVTWAFEPREPGENRSKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEA 161
Query: 472 DIVRN--------YGFVHLDATGDVNDAIKXLNGMMVDGQPMKVQLSTSR 597
I+R+ YGFV D AI +NG + + ++ +T +
Sbjct: 162 KIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNGAWLGRRTIRTNWATRK 211
Score = 35.9 bits (79), Expect = 0.025
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 8/72 (11%)
Frame = +1
Query: 121 SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRN--------YGFVHMENE 276
SK + F +F+G+L + LR F K+G V I+R+ YGFV
Sbjct: 124 SKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRR 183
Query: 277 QVGREAIQNLNG 312
+ AI +NG
Sbjct: 184 EDAERAIDEMNG 195
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 53.6 bits (123), Expect = 1e-07
Identities = 48/179 (26%), Positives = 74/179 (41%), Gaps = 30/179 (16%)
Frame = +1
Query: 121 SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRN--------YGFVHMENE 276
SK+ T F +F+G+LS + LR F+ +G V ++R+ YGFV
Sbjct: 14 SKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKR 73
Query: 277 QVGREAIQNLNGELVHGQXXXXXXXXSRK--------------------APSTPTTKIFV 396
+ AI+ +NG+ + G+ +RK S T ++V
Sbjct: 74 EEAERAIEQMNGQWL-GRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYV 132
Query: 397 GNLTDKTRAPEVRELFXKFGTVVECDI--VRNYGFVHLDATGDVNDAIKXLNGMMVDGQ 567
GN+ T E+R+ F FG + E I ++ Y FV D AI +N V GQ
Sbjct: 133 GNIASLTE-DEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQ 190
Score = 37.1 bits (82), Expect = 0.011
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Frame = +1
Query: 361 KAPSTPTTKIFVGNLTDKTRAPEVRELFXKFGTVVECDIVRN--------YGFVHLDATG 516
K +T +FVG+L+ + ++RE F FG V + ++R+ YGFV
Sbjct: 15 KIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 74
Query: 517 DVNDAIKXLNGMMVDGQPMKVQLSTSR 597
+ AI+ +NG + + ++ +T +
Sbjct: 75 EAERAIEQMNGQWLGRRTIRTNWATRK 101
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 53.6 bits (123), Expect = 1e-07
Identities = 48/179 (26%), Positives = 74/179 (41%), Gaps = 30/179 (16%)
Frame = +1
Query: 121 SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRN--------YGFVHMENE 276
SK+ T F +F+G+LS + LR F+ +G V ++R+ YGFV
Sbjct: 24 SKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKR 83
Query: 277 QVGREAIQNLNGELVHGQXXXXXXXXSRK--------------------APSTPTTKIFV 396
+ AI+ +NG+ + G+ +RK S T ++V
Sbjct: 84 EEAERAIEQMNGQWL-GRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYV 142
Query: 397 GNLTDKTRAPEVRELFXKFGTVVECDI--VRNYGFVHLDATGDVNDAIKXLNGMMVDGQ 567
GN+ T E+R+ F FG + E I ++ Y FV D AI +N V GQ
Sbjct: 143 GNIASLTE-DEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQ 200
Score = 37.1 bits (82), Expect = 0.011
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Frame = +1
Query: 361 KAPSTPTTKIFVGNLTDKTRAPEVRELFXKFGTVVECDIVRN--------YGFVHLDATG 516
K +T +FVG+L+ + ++RE F FG V + ++R+ YGFV
Sbjct: 25 KIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 84
Query: 517 DVNDAIKXLNGMMVDGQPMKVQLSTSR 597
+ AI+ +NG + + ++ +T +
Sbjct: 85 EAERAIEQMNGQWLGRRTIRTNWATRK 111
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 53.6 bits (123), Expect = 1e-07
Identities = 48/179 (26%), Positives = 74/179 (41%), Gaps = 30/179 (16%)
Frame = +1
Query: 121 SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRN--------YGFVHMENE 276
SK+ T F +F+G+LS + LR F+ +G V ++R+ YGFV
Sbjct: 127 SKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKR 186
Query: 277 QVGREAIQNLNGELVHGQXXXXXXXXSRK--------------------APSTPTTKIFV 396
+ AI+ +NG+ + G+ +RK S T ++V
Sbjct: 187 EEAERAIEQMNGQWL-GRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYV 245
Query: 397 GNLTDKTRAPEVRELFXKFGTVVECDI--VRNYGFVHLDATGDVNDAIKXLNGMMVDGQ 567
GN+ T E+R+ F FG + E I ++ Y FV D AI +N V GQ
Sbjct: 246 GNIASLTE-DEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQ 303
Score = 52.4 bits (120), Expect = 3e-07
Identities = 38/167 (22%), Positives = 74/167 (44%), Gaps = 18/167 (10%)
Frame = +1
Query: 151 IFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRN-----YGFVHMENEQVGREAIQNLNGE 315
+++GNL TE + LF + G+V ++ + Y FV + +A+Q +N
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGSNDPYAFVEFSDHGQASQALQTMNKR 107
Query: 316 LV--HGQXXXXXXXXSRKAPSTPTTK---IFVGNLTDKTRAPEVRELFXKFGTVVECDIV 480
L+ ++ TT+ +FVG+L+ + ++RE F FG V + ++
Sbjct: 108 LLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVI 167
Query: 481 RN--------YGFVHLDATGDVNDAIKXLNGMMVDGQPMKVQLSTSR 597
R+ YGFV + AI+ +NG + + ++ +T +
Sbjct: 168 RDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTNWATRK 214
Score = 31.1 bits (67), Expect = 0.70
Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Frame = +1
Query: 388 IFVGNLTDKTRAPEVRELFXKFGTVVECDIVRN-----YGFVHLDATGDVNDAIKXLNGM 552
++VGNL + LF + G+V + ++ + Y FV G + A++ +N
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGSNDPYAFVEFSDHGQASQALQTMNKR 107
Query: 553 MVDGQPMKVQLSTSRVRQR 609
++ + MKV + +Q+
Sbjct: 108 LLLDREMKVNWAVEPGQQQ 126
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 53.6 bits (123), Expect = 1e-07
Identities = 48/179 (26%), Positives = 74/179 (41%), Gaps = 30/179 (16%)
Frame = +1
Query: 121 SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRN--------YGFVHMENE 276
SK+ T F +F+G+LS + LR F+ +G V ++R+ YGFV
Sbjct: 95 SKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKR 154
Query: 277 QVGREAIQNLNGELVHGQXXXXXXXXSRK--------------------APSTPTTKIFV 396
+ AI+ +NG+ + G+ +RK S T ++V
Sbjct: 155 EEAERAIEQMNGQWL-GRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYV 213
Query: 397 GNLTDKTRAPEVRELFXKFGTVVECDI--VRNYGFVHLDATGDVNDAIKXLNGMMVDGQ 567
GN+ T E+R+ F FG + E I ++ Y FV D AI +N V GQ
Sbjct: 214 GNIASLTE-DEIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQ 271
Score = 37.1 bits (82), Expect = 0.011
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Frame = +1
Query: 361 KAPSTPTTKIFVGNLTDKTRAPEVRELFXKFGTVVECDIVRN--------YGFVHLDATG 516
K +T +FVG+L+ + ++RE F FG V + ++R+ YGFV
Sbjct: 96 KIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 155
Query: 517 DVNDAIKXLNGMMVDGQPMKVQLSTSR 597
+ AI+ +NG + + ++ +T +
Sbjct: 156 EAERAIEQMNGQWLGRRTIRTNWATRK 182
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 53.2 bits (122), Expect = 2e-07
Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 18/175 (10%)
Frame = +1
Query: 151 IFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRN--------YGFVHMENEQVGREAIQNL 306
++IG+L +EA L F G V+ + R+ Y +V+ + A+ +
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTM 118
Query: 307 NGELVHGQXXXXXXXXSRKAPSTPTT---KIFVGNLTDKTRAPEVRELFXKFGTVVECDI 477
N E++HG+ S++ P+ IF+ NL V + F FG ++ C +
Sbjct: 119 NFEVIHGRPMRIMW--SQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKV 176
Query: 478 V-------RNYGFVHLDATGDVNDAIKXLNGMMVDGQPMKVQLSTSRVRQRPGMG 621
+ YGFVH + AI+ +NGM++ + + V R ++ +G
Sbjct: 177 ATDDEGNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELG 231
Score = 49.6 bits (113), Expect = 2e-06
Identities = 43/187 (22%), Positives = 75/187 (40%), Gaps = 21/187 (11%)
Frame = +1
Query: 112 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVXCDIV-------RNYGFVHME 270
+P ++ G G IFI NL + F +G ++ C + + YGFVH E
Sbjct: 136 DPAARRAGNGN--IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFE 193
Query: 271 NEQVGREAIQNLNGELVHGQXXXXXXXXSRK-------APSTPTTKIFVGNLTDKTRAPE 429
E + AI+ +NG L+ + R T +FV N + +
Sbjct: 194 TEHSAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEK 253
Query: 430 VRELFXKFGTVVECDIV-------RNYGFVHLDATGDVNDAIKXLNGMMVDGQPMKVQLS 588
+ +F KFG + ++ + +GFV A++ LN +++G K LS
Sbjct: 254 LSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEKLNDSILEGTDCK--LS 311
Query: 589 TSRVRQR 609
R +++
Sbjct: 312 VCRAQKK 318
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 53.2 bits (122), Expect = 2e-07
Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 18/175 (10%)
Frame = +1
Query: 151 IFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRN--------YGFVHMENEQVGREAIQNL 306
++IG+L +EA L F G V+ + R+ Y +V+ + A+ +
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTM 118
Query: 307 NGELVHGQXXXXXXXXSRKAPSTPTT---KIFVGNLTDKTRAPEVRELFXKFGTVVECDI 477
N E++HG+ S++ P+ IF+ NL V + F FG ++ C +
Sbjct: 119 NFEVIHGRPMRIMW--SQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKV 176
Query: 478 V-------RNYGFVHLDATGDVNDAIKXLNGMMVDGQPMKVQLSTSRVRQRPGMG 621
+ YGFVH + AI+ +NGM++ + + V R ++ +G
Sbjct: 177 ATDDEGNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELG 231
Score = 49.6 bits (113), Expect = 2e-06
Identities = 43/187 (22%), Positives = 75/187 (40%), Gaps = 21/187 (11%)
Frame = +1
Query: 112 NP*SKMPGTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVXCDIV-------RNYGFVHME 270
+P ++ G G IFI NL + F +G ++ C + + YGFVH E
Sbjct: 136 DPAARRAGNGN--IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFE 193
Query: 271 NEQVGREAIQNLNGELVHGQXXXXXXXXSRK-------APSTPTTKIFVGNLTDKTRAPE 429
E + AI+ +NG L+ + R T +FV N + +
Sbjct: 194 TEHSAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEK 253
Query: 430 VRELFXKFGTVVECDIV-------RNYGFVHLDATGDVNDAIKXLNGMMVDGQPMKVQLS 588
+ +F KFG + ++ + +GFV A++ LN +++G K LS
Sbjct: 254 LSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEKLNDSILEGTDCK--LS 311
Query: 589 TSRVRQR 609
R +++
Sbjct: 312 VCRAQKK 318
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +1
Query: 385 KIFVGNLTDKTRAPEVRELFXKFGTVVECDIVRN---YGFVHLDATGDVNDAIKXLNGMM 555
K++VG L + E+ E+F +FG + + + R + FV D D DA++ L+G
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSR 63
Query: 556 VDGQPMKVQLSTSRVRQRPGMG 621
+ G +V+LST + R G G
Sbjct: 64 ICGVRARVELSTGQRRGGGGRG 85
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +1
Query: 385 KIFVGNLTDKTRAPEVRELFXKFGTVVECDIVRN---YGFVHLDATGDVNDAIKXLNGMM 555
K++VG L + E+ E+F +FG + + + R + FV D D DA++ L+G
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSR 63
Query: 556 VDGQPMKVQLSTSRVRQRPGMG 621
+ G +V+LST + R G G
Sbjct: 64 ICGVRARVELSTGQRRGGGGRG 85
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 3/82 (3%)
Frame = +1
Query: 385 KIFVGNLTDKTRAPEVRELFXKFGTVVECDIVRN---YGFVHLDATGDVNDAIKXLNGMM 555
K++VG L + E+ E+F +FG + + + R + FV D D DA++ L+G
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSR 63
Query: 556 VDGQPMKVQLSTSRVRQRPGMG 621
+ G +V+LST + R G G
Sbjct: 64 ICGVRARVELSTGQRRGGGGRG 85
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 48.0 bits (109), Expect = 6e-06
Identities = 47/185 (25%), Positives = 79/185 (42%), Gaps = 19/185 (10%)
Frame = +1
Query: 130 PGTGTFK-IFIGNLSDKTTEADLRPLFE-----KYGTVVXCDIV-RNYGFVHMENEQVGR 288
PGT + IF+ NL TTE ++R E ++ D+V R + +V MEN+Q +
Sbjct: 587 PGTEDARTIFVSNLDFTTTEDEIRQAIEGVASIRFARKANSDLVHRGFAYVVMENDQKAQ 646
Query: 289 EAIQN----LNGELVHGQXXXXXXXXSRKAPST-PTTKIFVGNLTDKTRAPEVRELFXKF 453
+A+ + G + K +T +K+FV N+ + E++ LF KF
Sbjct: 647 QALLKDRVPVKGRPMFISANDPEKRVGFKFSTTLEKSKVFVRNVHFQATDDELKALFSKF 706
Query: 454 GTVVECDIV-------RNYGFVHLDATGDVNDAIKXLNGMMVDGQPMKVQLSTSRVRQRP 612
GTV V + FV D + + +M+ + ++V LS V++
Sbjct: 707 GTVTSVRRVTHKDGKPKGIAFVDFDTEASAQKCVASGDKLMLRERELEVALSNPPVKKDK 766
Query: 613 GMGXP 627
G P
Sbjct: 767 SHGKP 771
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 47.6 bits (108), Expect = 8e-06
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Frame = +1
Query: 385 KIFVGNLTDKTRAPEVRELFXKFGTVVECDIVRN------YGFVHLDATGDVNDAIKXLN 546
++ V N+ K R P++ +F K G VV+ +I+ N +GFV + D + A N
Sbjct: 101 RLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFN 160
Query: 547 GMMVDGQPMKVQLSTSRVRQR 609
G ++G+ ++V L+T RV +
Sbjct: 161 GTTIEGRRVEVNLATQRVHNK 181
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Frame = +1
Query: 139 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRN------YGFVHMENEQVGREAIQ 300
G ++ + N+ K E DL +FEK G VV +I+ N +GFV M+N A
Sbjct: 98 GPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARA 157
Query: 301 NLNGELVHGQ 330
NG + G+
Sbjct: 158 EFNGTTIEGR 167
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 47.6 bits (108), Expect = 8e-06
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +1
Query: 361 KAPSTPTTKIFVGNLTDKTRAPEVRELFXKFGTVVECDIV-RNYGFVHLDATGDVNDAIK 537
K T ++FVGNL ++ + E++ELF G + EC + + + F+ LD A +
Sbjct: 109 KKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESAKE 168
Query: 538 XLNGMMVDGQPMKVQLS 588
++G ++ G+ ++V+ +
Sbjct: 169 AIDGRIIHGRQVRVRFA 185
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 47.6 bits (108), Expect = 8e-06
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Frame = +1
Query: 361 KAPSTPTTKIFVGNLTDKTRAPEVRELFXKFGTVVECDIV-RNYGFVHLDATGDVNDAIK 537
K T ++FVGNL ++ + E++ELF G + EC + + + F+ LD A +
Sbjct: 109 KKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESAKE 168
Query: 538 XLNGMMVDGQPMKVQLS 588
++G ++ G+ ++V+ +
Sbjct: 169 AIDGRIIHGRQVRVRFA 185
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 47.6 bits (108), Expect = 8e-06
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Frame = +1
Query: 385 KIFVGNLTDKTRAPEVRELFXKFGTVVECDIVRN------YGFVHLDATGDVNDAIKXLN 546
++ V N+ K R P++ +F K G VV+ +I+ N +GFV + D + A N
Sbjct: 101 RLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFN 160
Query: 547 GMMVDGQPMKVQLSTSRVRQR 609
G ++G+ ++V L+T RV +
Sbjct: 161 GTTIEGRRVEVNLATQRVHNK 181
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Frame = +1
Query: 139 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRN------YGFVHMENEQVGREAIQ 300
G ++ + N+ K E DL +FEK G VV +I+ N +GFV M+N A
Sbjct: 98 GPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARA 157
Query: 301 NLNGELVHGQ 330
NG + G+
Sbjct: 158 EFNGTTIEGR 167
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 47.6 bits (108), Expect = 8e-06
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Frame = +1
Query: 385 KIFVGNLTDKTRAPEVRELFXKFGTVVECDIVRNYG----FVHLDATGDVNDAIKXLNGM 552
K++VGNL R EV ++F K+G + DI G FV + D DA++ +G
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGY 69
Query: 553 MVDGQPMKVQLSTSRVRQRPGMGXPEQ 633
DG+ ++V+ + + PG G P Q
Sbjct: 70 EFDGRRIRVEFTRGVGPRGPG-GRPLQ 95
Score = 35.5 bits (78), Expect = 0.033
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = +1
Query: 133 GTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRNYG----FVHMENEQVGREAIQ 300
G+ K+++GNL E ++ +F KYG + DI G FV E+ + +A++
Sbjct: 5 GSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVR 64
Query: 301 NLNG 312
+G
Sbjct: 65 ARDG 68
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 47.2 bits (107), Expect = 1e-05
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 4/87 (4%)
Frame = +1
Query: 385 KIFVGNLTDKTRAPEVRELFXKFGTVVECDIVRNYG----FVHLDATGDVNDAIKXLNGM 552
K++VGNL R EV ++F K+G + DI G FV + D DA++ +G
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGY 69
Query: 553 MVDGQPMKVQLSTSRVRQRPGMGXPEQ 633
DG+ ++V+ T V R G P Q
Sbjct: 70 EFDGRRIRVEF-TRGVGPRGPSGRPLQ 95
Score = 35.5 bits (78), Expect = 0.033
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = +1
Query: 133 GTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRNYG----FVHMENEQVGREAIQ 300
G+ K+++GNL E ++ +F KYG + DI G FV E+ + +A++
Sbjct: 5 GSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVR 64
Query: 301 NLNG 312
+G
Sbjct: 65 ARDG 68
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 46.4 bits (105), Expect = 2e-05
Identities = 40/163 (24%), Positives = 65/163 (39%), Gaps = 19/163 (11%)
Frame = +1
Query: 133 GTGTFKIFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRN--------YGFVHMENEQVGR 288
G + I L T+ ++R LF G + C +VR+ YGFV+ E+
Sbjct: 38 GESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDAL 97
Query: 289 EAIQNLNGELVHGQXXXXXXXXSRKAPSTPTTK---IFVGNLTDKTRAPEVRELFXKFGT 459
A+ + NG + + S PS K ++V + E+ +F FG
Sbjct: 98 RAVSSFNGLRLQNKTIKV----SYARPSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQ 153
Query: 460 VVECDIV--------RNYGFVHLDATGDVNDAIKXLNGMMVDG 564
++ I+ + GFV D + + AIK LNG + G
Sbjct: 154 IITSRILSDNVTGLSKGVGFVRFDKKDEADVAIKTLNGSIPSG 196
Score = 36.3 bits (80), Expect = 0.019
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Frame = +1
Query: 136 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRN-------YGFVHMENEQVGREA 294
T + +F+ NLS T + L LF ++G +V I+R+ Y FV M N A
Sbjct: 371 TAGYCLFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQQCKGYAFVSMSNYTEAYNA 430
Query: 295 IQNLNGELVHGQ 330
+ +LNG + G+
Sbjct: 431 MLSLNGTNLAGK 442
Score = 34.7 bits (76), Expect = 0.057
Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 8/74 (10%)
Frame = +1
Query: 382 TKIFVGNLTDKTRAPEVRELFXKFGTVVECDIVRN--------YGFVHLDATGDVNDAIK 537
T + + L EVR LF G + C +VR+ YGFV+ D A+
Sbjct: 42 TNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVS 101
Query: 538 XLNGMMVDGQPMKV 579
NG+ + + +KV
Sbjct: 102 SFNGLRLQNKTIKV 115
Score = 34.3 bits (75), Expect = 0.076
Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 9/104 (8%)
Frame = +1
Query: 310 GELVHGQXXXXXXXXSRKAPSTPTTK--IFVGNLTDKTRAPEVRELFXKFGTVVECDIVR 483
G H Q + P + T +FV NL+ T + +LF +FG +V I+R
Sbjct: 348 GLAAHAQLSALSASVAATLPPSDTAGYCLFVYNLSSDTDDTLLWQLFSQFGAIVNVKILR 407
Query: 484 N-------YGFVHLDATGDVNDAIKXLNGMMVDGQPMKVQLSTS 594
+ Y FV + + +A+ LNG + G+ ++V +S
Sbjct: 408 DLTQQCKGYAFVSMSNYTEAYNAMLSLNGTNLAGKTLQVVFKSS 451
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 44.8 bits (101), Expect = 5e-05
Identities = 37/170 (21%), Positives = 74/170 (43%), Gaps = 20/170 (11%)
Frame = +1
Query: 148 KIFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRN--------YGFVHMENEQVGREAIQN 303
KIF+G L+ TT+ +R + ++G + ++R+ +GFV + A++
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 304 ----LNGELVHGQXXXXXXXXSRKAPSTPTTKIFVGNLTDKTRAPEVRELFXKFGTVVEC 471
++G+ V + +R + T +++V + + + E F K+GTV +
Sbjct: 84 RPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKS 143
Query: 472 DIV--------RNYGFVHLDATGDVNDAIKXLNGMMVDGQPMKVQLSTSR 597
+I+ R +GFV D V+ + MV+G V+ S+
Sbjct: 144 EIILDKATQKPRGFGFVTFDDHDSVDQCV-LQKSHMVNGHRCDVRKGLSK 192
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 44.8 bits (101), Expect = 5e-05
Identities = 37/170 (21%), Positives = 74/170 (43%), Gaps = 20/170 (11%)
Frame = +1
Query: 148 KIFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRN--------YGFVHMENEQVGREAIQN 303
KIF+G L+ TT+ +R + ++G + ++R+ +GFV + A++
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 304 ----LNGELVHGQXXXXXXXXSRKAPSTPTTKIFVGNLTDKTRAPEVRELFXKFGTVVEC 471
++G+ V + +R + T +++V + + + E F K+GTV +
Sbjct: 84 RPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKS 143
Query: 472 DIV--------RNYGFVHLDATGDVNDAIKXLNGMMVDGQPMKVQLSTSR 597
+I+ R +GFV D V+ + MV+G V+ S+
Sbjct: 144 EIILDKATQKPRGFGFVTFDDHDSVDQCV-LQKSHMVNGHRCDVRKGLSK 192
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 44.8 bits (101), Expect = 5e-05
Identities = 37/170 (21%), Positives = 74/170 (43%), Gaps = 20/170 (11%)
Frame = +1
Query: 148 KIFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRN--------YGFVHMENEQVGREAIQN 303
KIF+G L+ TT+ +R + ++G + ++R+ +GFV + A++
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 304 ----LNGELVHGQXXXXXXXXSRKAPSTPTTKIFVGNLTDKTRAPEVRELFXKFGTVVEC 471
++G+ V + +R + T +++V + + + E F K+GTV +
Sbjct: 84 RPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKS 143
Query: 472 DIV--------RNYGFVHLDATGDVNDAIKXLNGMMVDGQPMKVQLSTSR 597
+I+ R +GFV D V+ + MV+G V+ S+
Sbjct: 144 EIILDKATQKPRGFGFVTFDDHDSVDQCV-LQKSHMVNGHRCDVRKGLSK 192
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 44.4 bits (100), Expect = 7e-05
Identities = 19/71 (26%), Positives = 35/71 (49%)
Frame = +1
Query: 385 KIFVGNLTDKTRAPEVRELFXKFGTVVECDIVRNYGFVHLDATGDVNDAIKXLNGMMVDG 564
+I++G LT + ++ F +G + + + +GFV D D DA+ LNG + G
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63
Query: 565 QPMKVQLSTSR 597
+ + + S R
Sbjct: 64 ERVILDYSKPR 74
Score = 44.0 bits (99), Expect = 9e-05
Identities = 17/61 (27%), Positives = 36/61 (59%)
Frame = +1
Query: 148 KIFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRNYGFVHMENEQVGREAIQNLNGELVHG 327
+I+IG L+ + +E D+ F YG + + +GFV ++++ +A+ +LNG+ + G
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63
Query: 328 Q 330
+
Sbjct: 64 E 64
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 44.4 bits (100), Expect = 7e-05
Identities = 19/71 (26%), Positives = 35/71 (49%)
Frame = +1
Query: 385 KIFVGNLTDKTRAPEVRELFXKFGTVVECDIVRNYGFVHLDATGDVNDAIKXLNGMMVDG 564
+I++G LT + ++ F +G + + + +GFV D D DA+ LNG + G
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63
Query: 565 QPMKVQLSTSR 597
+ + + S R
Sbjct: 64 ERVILDYSKPR 74
Score = 44.0 bits (99), Expect = 9e-05
Identities = 17/61 (27%), Positives = 36/61 (59%)
Frame = +1
Query: 148 KIFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRNYGFVHMENEQVGREAIQNLNGELVHG 327
+I+IG L+ + +E D+ F YG + + +GFV ++++ +A+ +LNG+ + G
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63
Query: 328 Q 330
+
Sbjct: 64 E 64
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 44.4 bits (100), Expect = 7e-05
Identities = 19/71 (26%), Positives = 35/71 (49%)
Frame = +1
Query: 385 KIFVGNLTDKTRAPEVRELFXKFGTVVECDIVRNYGFVHLDATGDVNDAIKXLNGMMVDG 564
+I++G LT + ++ F +G + + + +GFV D D DA+ LNG + G
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63
Query: 565 QPMKVQLSTSR 597
+ + + S R
Sbjct: 64 ERVILDYSKPR 74
Score = 44.0 bits (99), Expect = 9e-05
Identities = 17/61 (27%), Positives = 36/61 (59%)
Frame = +1
Query: 148 KIFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRNYGFVHMENEQVGREAIQNLNGELVHG 327
+I+IG L+ + +E D+ F YG + + +GFV ++++ +A+ +LNG+ + G
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGG 63
Query: 328 Q 330
+
Sbjct: 64 E 64
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 44.4 bits (100), Expect = 7e-05
Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 19/168 (11%)
Frame = +1
Query: 175 KTTEADLRPLFEKYGTVVXCDIVR-------NYGFVHMENEQVGRE-AIQNLNGELVHGQ 330
KTT+ + FE GTVV C+I R +GFV M + VG + + + ++ G+
Sbjct: 183 KTTDECFQKYFEDIGTVVFCEIKRKSDGNSKGFGFVRMSS--VGEQNKVLAIPQHMIDGR 240
Query: 331 XXXXXXXXSRKAPSTPT-TKIFVGNLTDKTRAPEVRELFXK-----FGTVVECDI----- 477
R P+ ++IFVG LTDK ++R++F T V D+
Sbjct: 241 RCDVKVPDGRDKQGRPSISRIFVGRLTDKVDEHQLRKVFGDEAKSYIETAVVTDVFIPKP 300
Query: 478 VRNYGFVHLDATGDVNDAIKXLNGMMVDGQPMKVQLSTSRVRQRPGMG 621
R + FV L ++ + + I + V+G + + ++ R +G
Sbjct: 301 FRGFAFVTL-SSAEAAERIVSKGSLTVNGLSVGLSIAQPREENNQSVG 347
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Frame = +1
Query: 139 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRN------YGFVHMENEQVGREAIQ 300
G ++ + N+ + + DL+ +FEK+G V +I+ N +GFV ME Q A Q
Sbjct: 151 GPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQ 210
Query: 301 NLNGELVHGQ 330
L+G ++ G+
Sbjct: 211 ELHGSMIEGR 220
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Frame = +1
Query: 139 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRN------YGFVHMENEQVGREAIQ 300
G ++ + N+ + + DL+ +FEK+G V +I+ N +GFV ME Q A Q
Sbjct: 151 GPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQ 210
Query: 301 NLNGELVHGQ 330
L+G ++ G+
Sbjct: 211 ELHGSMIEGR 220
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 40.7 bits (91), Expect = 9e-04
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Frame = +1
Query: 151 IFIGNLSDKTTEADLRPLFEKYGTVVXCDIV--------RNYGFVHMENEQVGREAIQNL 306
+F+GN+S +E +R +F K G V+ +V + YGF+ + Q AI+NL
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRNL 79
Query: 307 NGELVHGQ 330
NG + G+
Sbjct: 80 NGYELSGR 87
Score = 34.7 bits (76), Expect = 0.057
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
Frame = +1
Query: 388 IFVGNLTDKTRAPEVRELFXKFGTVVECDIV--------RNYGFVHLDATGDVNDAIKXL 543
+FVGN++ +R +F K G V+ +V + YGF+ AI+ L
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRNL 79
Query: 544 NGMMVDGQPMKV 579
NG + G+ ++V
Sbjct: 80 NGYELSGRILRV 91
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
Frame = +1
Query: 376 PTTKIFVGNLTDKTRAPEVRELFXKFGTVVECDIV--------RNYGFVHLDATGDVNDA 531
P+ + V NL+ T ++R++F +FG + +CD+V R +GF++ + D A
Sbjct: 74 PSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAA 133
Query: 532 IKXLNGMMVDGQPMKVQLSTSRVRQRPGMG 621
L +DG ++V S ++ P G
Sbjct: 134 RDKLCNTDLDGHKIRVDFSLTKRGHSPTPG 163
Score = 34.3 bits (75), Expect = 0.076
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 11/58 (18%)
Frame = +1
Query: 163 NLSDKTTEADLRPLFEKYGTVVXCDIV--------RNYGFVH---MENEQVGREAIQN 303
NLS TTE DLR +F ++G + CD+V R +GF++ +E+ R+ + N
Sbjct: 82 NLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCN 139
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/61 (24%), Positives = 36/61 (59%)
Frame = +1
Query: 148 KIFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRNYGFVHMENEQVGREAIQNLNGELVHG 327
+++IG L ++ ++ D+ F YG + + +GFV ++++ +A+ +LNG+ + G
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIMKNGFGFVDFQDQRDADDAVHDLNGKELCG 62
Query: 328 Q 330
+
Sbjct: 63 E 63
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Frame = +1
Query: 385 KIFVGNLTDKTRAPEVRELFXKFGTVVECDIVRNYGFVHLDATGDVNDAIKXLNGMMVDG 564
++++G L ++ +V F +G + + + +GFV D +DA+ LNG + G
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIMKNGFGFVDFQDQRDADDAVHDLNGKELCG 62
Query: 565 QPMKVQLSTSRV---RQRPGMG 621
+ + ++ +V +R G G
Sbjct: 63 ERVILEFPRRKVGYNEERSGSG 84
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 39.9 bits (89), Expect = 0.002
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 17/166 (10%)
Frame = +1
Query: 151 IFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRN--------YGFVHMENEQVGREAIQNL 306
I++G L +K +E+ L L + G VV ++ ++ +GFV E+ AI+ L
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74
Query: 307 NGELVHGQXXXXXXXXSRKAPSTPTTKIFVGNLTDKTRAPEVRELFXKFGTVVEC-DIVR 483
N ++G+ + + IFVGNL + + + F FG +++ I+R
Sbjct: 75 NMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMR 134
Query: 484 NY------GFVHLD-ATGDVND-AIKXLNGMMVDGQPMKVQLSTSR 597
+ GF ++ A+ + +D A++ +NG + + + V + R
Sbjct: 135 DVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFKR 180
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 39.9 bits (89), Expect = 0.002
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 17/166 (10%)
Frame = +1
Query: 151 IFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRN--------YGFVHMENEQVGREAIQNL 306
I++G L +K +E+ L L + G VV ++ ++ +GFV E+ AI+ L
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 84
Query: 307 NGELVHGQXXXXXXXXSRKAPSTPTTKIFVGNLTDKTRAPEVRELFXKFGTVVEC-DIVR 483
N ++G+ + + IFVGNL + + + F FG +++ I+R
Sbjct: 85 NMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMR 144
Query: 484 NY------GFVHLD-ATGDVND-AIKXLNGMMVDGQPMKVQLSTSR 597
+ GF ++ A+ + +D A++ +NG + + + V + R
Sbjct: 145 DVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYAFKR 190
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Frame = +1
Query: 370 STPTTKIFVGNLTDKTRAPEVRELFXKFGTVVECDIV---------RNYGFVHLDATGDV 522
++P ++ + NL+ + E+F +G + D+ R YG+V D D
Sbjct: 129 ASPAKRVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLEDA 188
Query: 523 NDAIKXLNGMMVDGQPMKVQLSTSR 597
+IK ++G +DG + V+++ R
Sbjct: 189 EKSIKHMDGGQIDGMAVHVEMTIGR 213
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 9/69 (13%)
Frame = +1
Query: 148 KIFIGNLSDKTTEADLRPLFEKYGTVVXCDIV---------RNYGFVHMENEQVGREAIQ 300
++ I NLS + L +F YG + D+ R YG+V +N + ++I+
Sbjct: 134 RVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLEDAEKSIK 193
Query: 301 NLNGELVHG 327
+++G + G
Sbjct: 194 HMDGGQIDG 202
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 39.5 bits (88), Expect = 0.002
Identities = 32/185 (17%), Positives = 71/185 (38%), Gaps = 32/185 (17%)
Frame = +1
Query: 151 IFIGNLSDKTTEADLRPLFEKYGTVVXCDIV------RNYGFVHMENEQVGREAIQNLNG 312
+++ N D + L LF K+G + C+++ + +GFV N + A+Q L+
Sbjct: 155 VYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHD 214
Query: 313 ELVHGQXXXXXXXXSRKAPSTPT-------------------TKIFVGNLTDKTRAPEVR 435
+ G ++K ++V NL + ++
Sbjct: 215 STIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLK 274
Query: 436 ELFXKFGTVVECDIV-------RNYGFVHLDATGDVNDAIKXLNGMMVDGQPMKVQLSTS 594
+ F +G + ++ + +GFV + + A+ +N MV +P+ V ++
Sbjct: 275 KQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIAQR 334
Query: 595 RVRQR 609
+ +R
Sbjct: 335 KEDRR 339
Score = 37.1 bits (82), Expect = 0.011
Identities = 17/74 (22%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
Frame = +1
Query: 382 TKIFVGNLTDKTRAPEVRELFXKFGTVVECDIV------RNYGFVHLDATGDVNDAIKXL 543
T ++V N D + +LF KFG + C+++ + +GFV + A++ L
Sbjct: 153 TNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQAL 212
Query: 544 NGMMVDGQPMKVQL 585
+ ++G +K+ +
Sbjct: 213 HDSTIEGTDLKLHV 226
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/59 (27%), Positives = 32/59 (54%)
Frame = +1
Query: 151 IFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRNYGFVHMENEQVGREAIQNLNGELVHG 327
++I N+ + TE L LF++Y ++ V++Y F+H +A++ NG+ + G
Sbjct: 379 LYIRNIKEAVTEEKLNELFKEYASLDRVKKVKDYAFIHFNERDDCLKAMEEWNGKELEG 437
Score = 36.3 bits (80), Expect = 0.019
Identities = 14/67 (20%), Positives = 36/67 (53%)
Frame = +1
Query: 388 IFVGNLTDKTRAPEVRELFXKFGTVVECDIVRNYGFVHLDATGDVNDAIKXLNGMMVDGQ 567
+++ N+ + ++ ELF ++ ++ V++Y F+H + D A++ NG ++G
Sbjct: 379 LYIRNIKEAVTEEKLNELFKEYASLDRVKKVKDYAFIHFNERDDCLKAMEEWNGKELEGT 438
Query: 568 PMKVQLS 588
++ L+
Sbjct: 439 VVEASLA 445
Score = 27.9 bits (59), Expect = 6.6
Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 9/106 (8%)
Frame = +1
Query: 148 KIFIGNLSDKTTEADLRPLFEKYGTVVXCDIV--------RNYGFVHMENEQVGREAIQN 303
+I++G++ E L PLFEK G + ++ R Y FV N++ A +
Sbjct: 201 EIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKT 260
Query: 304 LNG-ELVHGQXXXXXXXXSRKAPSTPTTKIFVGNLTDKTRAPEVRE 438
+G E+ G+ + S T++F+GN+ E+ E
Sbjct: 261 YDGHEISTGKPL-------KVNVSIANTRLFIGNIPKTKSKDEILE 299
>AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger
transcription factorfamily protein 4 protein.
Length = 367
Score = 37.9 bits (84), Expect = 0.006
Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +1
Query: 355 SRKAPSTPTTKIFVGNLTDKT-RAPEVRELFXKFGTVVECDIV--RNYGFVHLDATGDVN 525
S K P ++F+GN+ ++ ELF FG ++ + + +GFV + G +
Sbjct: 74 SSKDPHMIRARVFIGNIARAIITRDDIIELFRPFGKIIAVNYFAQQGFGFVQFNEAGSAD 133
Query: 526 DAIKXLNGM 552
++ + LNGM
Sbjct: 134 ESCRSLNGM 142
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 37.5 bits (83), Expect = 0.008
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
Frame = +1
Query: 139 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRN--------YGFVHMENEQVGREA 294
G + I NLS +TT DLR FE+YG + I R+ +GFV + A
Sbjct: 17 GLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHA 76
Query: 295 IQNLNGELVHGQ 330
+ +G+LV G+
Sbjct: 77 LDRTDGKLVDGR 88
Score = 35.5 bits (78), Expect = 0.033
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Frame = +1
Query: 358 RKAPS-TPTTKIFVGNLTDKTRAPEVRELFXKFGTVVECDIVRN--------YGFVHLDA 510
R AP T + + NL+ +T ++R F ++G + + I R+ +GFV
Sbjct: 10 RAAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYE 69
Query: 511 TGDVNDAIKXLNGMMVDGQPMKVQLS 588
D A+ +G +VDG+ ++V L+
Sbjct: 70 RRDAEHALDRTDGKLVDGRELRVTLA 95
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 37.5 bits (83), Expect = 0.008
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
Frame = +1
Query: 139 GTFKIFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRN--------YGFVHMENEQVGREA 294
G + I NLS +TT DLR FE+YG + I R+ +GFV + A
Sbjct: 17 GLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHA 76
Query: 295 IQNLNGELVHGQ 330
+ +G+LV G+
Sbjct: 77 LDRTDGKLVDGR 88
Score = 35.5 bits (78), Expect = 0.033
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Frame = +1
Query: 358 RKAPS-TPTTKIFVGNLTDKTRAPEVRELFXKFGTVVECDIVRN--------YGFVHLDA 510
R AP T + + NL+ +T ++R F ++G + + I R+ +GFV
Sbjct: 10 RAAPDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYE 69
Query: 511 TGDVNDAIKXLNGMMVDGQPMKVQLS 588
D A+ +G +VDG+ ++V L+
Sbjct: 70 RRDAEHALDRTDGKLVDGRELRVTLA 95
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 37.1 bits (82), Expect = 0.011
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Frame = +1
Query: 439 LFXKFGTVVECDIVRN------YGFVHLDATGDVNDAIKXLNGMMVDGQPMKVQLSTSRV 600
+F K G VV+ +I+ N +GFV + D + A NG ++G+ ++V L+T RV
Sbjct: 1 MFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRV 60
Query: 601 RQR 609
+
Sbjct: 61 HNK 63
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
Frame = +1
Query: 202 LFEKYGTVVXCDIVRN------YGFVHMENEQVGREAIQNLNGELVHGQ 330
+FEK G VV +I+ N +GFV M+N A NG + G+
Sbjct: 1 MFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGR 49
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 37.1 bits (82), Expect = 0.011
Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Frame = +1
Query: 361 KAPSTPTTKIFVGNLTDKTRAPEVRELFXKFGTVVECDIV-------RNYGFVHLDATGD 519
+A P +FVG + +T ++R F +G + + +V R Y F+ +
Sbjct: 97 RASEDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHDEAGKPRGYAFIEYSDKAE 156
Query: 520 VNDAIKXLNGMMVDGQPMKVQLSTSRVRQ 606
++ A K +G+ VDG+ + V R ++
Sbjct: 157 MHTAYKKADGIKVDGKRLVVDYERGRTQK 185
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Frame = +1
Query: 151 IFIGNLSDKTTEADLRPLFEKYGTVVXCDIV-------RNYGFVHMENEQVGREAIQNLN 309
+F+G ++ +T+E+ LR FE YG + +V R Y F+ ++ A + +
Sbjct: 106 LFVGRINYETSESKLRREFEAYGKIKKLTMVHDEAGKPRGYAFIEYSDKAEMHTAYKKAD 165
Query: 310 GELVHGQ 330
G V G+
Sbjct: 166 GIKVDGK 172
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 36.3 bits (80), Expect = 0.019
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Frame = +1
Query: 136 TGTFKIFIGNLSDKTTEADLRPLFEKYGTV----VXCD----IVRNYGFVHMENEQVGRE 291
+G F +++GN +TTE +L F G + + CD R + F+ E +
Sbjct: 2 SGIFSVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQR 61
Query: 292 AIQNLNGELVHGQ 330
A++ +NG +G+
Sbjct: 62 AVEQMNGAEFNGR 74
Score = 34.7 bits (76), Expect = 0.057
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
Frame = +1
Query: 388 IFVGNLTDKTRAPEVRELFXKFGTVVECDIV--------RNYGFVHLDATGDVNDAIKXL 543
++VGN +T E+ F G + IV R + F+ G A++ +
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQM 66
Query: 544 NGMMVDGQPMKVQLS 588
NG +G+P++V L+
Sbjct: 67 NGAEFNGRPLRVNLA 81
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 35.9 bits (79), Expect = 0.025
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 12/74 (16%)
Frame = +1
Query: 136 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVXCDIV--------RNYGFVHMENEQVGRE 291
T T K+FIG LS +T D++ FE YG V ++ R +GFV ++++V +
Sbjct: 131 TKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADK 190
Query: 292 AIQ----NLNGELV 321
+ +NG++V
Sbjct: 191 VCEIHFHEINGKMV 204
Score = 35.1 bits (77), Expect = 0.043
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +1
Query: 385 KIFVGNLTDKTRAPEVRELFXKFGTVVECDIVRN 486
K+F+G L+ +T A +R+ F +FG V EC ++R+
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRD 79
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 35.9 bits (79), Expect = 0.025
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
Frame = +1
Query: 373 TPTTKIFVGNLTDKTRAPEVRELFXKFGTVVECDIV--------RNYGFVHLDATGDVND 528
T TKIFVG L T + E F +FG + E ++ R YGFV +
Sbjct: 32 TMFTKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAER 91
Query: 529 AIKXLNGMMVDGQPMKVQLS 588
A K N ++DG+ V L+
Sbjct: 92 ACKDPN-PIIDGRKANVNLA 110
Score = 31.1 bits (67), Expect = 0.70
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Frame = +1
Query: 148 KIFIGNLSDKTTEADLRPLFEKYGTVVXCDIV--------RNYGFVHMENEQVGREAIQN 303
KIF+G L T++ L FE++G + ++ R YGFV M++ A ++
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKD 95
Query: 304 LN 309
N
Sbjct: 96 PN 97
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 35.9 bits (79), Expect = 0.025
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 12/74 (16%)
Frame = +1
Query: 136 TGTFKIFIGNLSDKTTEADLRPLFEKYGTVVXCDIV--------RNYGFVHMENEQVGRE 291
T T K+FIG LS +T D++ FE YG V ++ R +GFV ++++V +
Sbjct: 131 TKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADK 190
Query: 292 AIQ----NLNGELV 321
+ +NG++V
Sbjct: 191 VCEIHFHEINGKMV 204
Score = 35.1 bits (77), Expect = 0.043
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +1
Query: 385 KIFVGNLTDKTRAPEVRELFXKFGTVVECDIVRN 486
K+F+G L+ +T A +R+ F +FG V EC ++R+
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRD 79
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 35.5 bits (78), Expect = 0.033
Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Frame = +1
Query: 145 FKIFIGNLSDKTTEADLRPLFEKYGTVVXCDIV--------RNYGFVHMENEQVGREAIQ 300
F++++ ++ +E DL+ +FE +G +V C + R +G++ N EAI
Sbjct: 207 FRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIA 266
Query: 301 NLN 309
+N
Sbjct: 267 GMN 269
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 35.5 bits (78), Expect = 0.033
Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Frame = +1
Query: 145 FKIFIGNLSDKTTEADLRPLFEKYGTVVXCDIV--------RNYGFVHMENEQVGREAIQ 300
F++++ ++ +E DL+ +FE +G +V C + R +G++ N EAI
Sbjct: 207 FRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIA 266
Query: 301 NLN 309
+N
Sbjct: 267 GMN 269
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 35.5 bits (78), Expect = 0.033
Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 8/63 (12%)
Frame = +1
Query: 145 FKIFIGNLSDKTTEADLRPLFEKYGTVVXCDIV--------RNYGFVHMENEQVGREAIQ 300
F++++ ++ +E DL+ +FE +G +V C + R +G++ N EAI
Sbjct: 207 FRVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIA 266
Query: 301 NLN 309
+N
Sbjct: 267 GMN 269
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 35.1 bits (77), Expect = 0.043
Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +1
Query: 361 KAPSTPTTKIFVGNLTDKTRAPEVRELFXKFGTVVECDIV-RNYGFVHL 504
K T ++FVGNL ++ + E++ELF G + EC + + + F+ L
Sbjct: 109 KKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYLSGKGFAFLRL 157
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 35.1 bits (77), Expect = 0.043
Identities = 36/140 (25%), Positives = 59/140 (42%), Gaps = 23/140 (16%)
Frame = +1
Query: 148 KIFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRN--------YGFVHMEN----EQVGRE 291
K+FIG LS TT+ L F ++G VV ++R+ +GFV + E +
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 109
Query: 292 AIQNLNGELVHGQXXXXXXXXSRKAP-------STPTTKIFVGNLTDKTRAPE-VRELFX 447
L G+ V + S P P K+ + +T+ + + +R F
Sbjct: 110 RPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYFE 169
Query: 448 KFGTVVECDIV---RNYGFV 498
FGT+ + +I+ R GFV
Sbjct: 170 TFGTLDQVEILGQPRGLGFV 189
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 35.1 bits (77), Expect = 0.043
Identities = 36/140 (25%), Positives = 59/140 (42%), Gaps = 23/140 (16%)
Frame = +1
Query: 148 KIFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRN--------YGFVHMEN----EQVGRE 291
K+FIG LS TT+ L F ++G VV ++R+ +GFV + E +
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 129
Query: 292 AIQNLNGELVHGQXXXXXXXXSRKAP-------STPTTKIFVGNLTDKTRAPE-VRELFX 447
L G+ V + S P P K+ + +T+ + + +R F
Sbjct: 130 RPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYFE 189
Query: 448 KFGTVVECDIV---RNYGFV 498
FGT+ + +I+ R GFV
Sbjct: 190 TFGTLDQVEILGQPRGLGFV 209
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 35.1 bits (77), Expect = 0.043
Identities = 36/140 (25%), Positives = 59/140 (42%), Gaps = 23/140 (16%)
Frame = +1
Query: 148 KIFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRN--------YGFVHMEN----EQVGRE 291
K+FIG LS TT+ L F ++G VV ++R+ +GFV + E +
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 130
Query: 292 AIQNLNGELVHGQXXXXXXXXSRKAP-------STPTTKIFVGNLTDKTRAPE-VRELFX 447
L G+ V + S P P K+ + +T+ + + +R F
Sbjct: 131 RPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYFE 190
Query: 448 KFGTVVECDIV---RNYGFV 498
FGT+ + +I+ R GFV
Sbjct: 191 TFGTLDQVEILGQPRGLGFV 210
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 34.7 bits (76), Expect = 0.057
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Frame = +1
Query: 376 PTTKIFVGNLTDKTRAPEVRELFXKFGTVVECDIVRN--------YGFVHLDATGDVNDA 531
P +FV L T ++ +F +FG + C+IVR+ Y F+ D A
Sbjct: 239 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQA 298
Query: 532 IKXLNGMMVDGQPMKVQLSTS 594
++ +++D + + V S S
Sbjct: 299 FFKMDNVLIDDRRIHVDFSQS 319
Score = 34.3 bits (75), Expect = 0.076
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 8/65 (12%)
Frame = +1
Query: 151 IFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRN--------YGFVHMENEQVGREAIQNL 306
+F+ L+ TT+ DL +F ++G + C+IVR+ Y F+ +N + +A +
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 307 NGELV 321
+ L+
Sbjct: 303 DNVLI 307
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 34.7 bits (76), Expect = 0.057
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 8/70 (11%)
Frame = +1
Query: 145 FKIFIGNLSDKTTEADLRPLFEKYGTV----VXCD----IVRNYGFVHMENEQVGREAIQ 300
F +++GN +TTE DL F + G V + CD R + FV E + A+
Sbjct: 4 FSVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVD 63
Query: 301 NLNGELVHGQ 330
NG +G+
Sbjct: 64 QFNGVDFNGR 73
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 34.7 bits (76), Expect = 0.057
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Frame = +1
Query: 376 PTTKIFVGNLTDKTRAPEVRELFXKFGTVVECDIVRN--------YGFVHLDATGDVNDA 531
P +FV L T ++ +F +FG + C+IVR+ Y F+ D A
Sbjct: 239 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQA 298
Query: 532 IKXLNGMMVDGQPMKVQLSTS 594
++ +++D + + V S S
Sbjct: 299 FFKMDNVLIDDRRIHVDFSQS 319
Score = 34.3 bits (75), Expect = 0.076
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 8/65 (12%)
Frame = +1
Query: 151 IFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRN--------YGFVHMENEQVGREAIQNL 306
+F+ L+ TT+ DL +F ++G + C+IVR+ Y F+ +N + +A +
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 302
Query: 307 NGELV 321
+ L+
Sbjct: 303 DNVLI 307
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 34.7 bits (76), Expect = 0.057
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Frame = +1
Query: 376 PTTKIFVGNLTDKTRAPEVRELFXKFGTVVECDIVRN--------YGFVHLDATGDVNDA 531
P +FV L T ++ +F +FG + C+IVR+ Y F+ D A
Sbjct: 170 PENVLFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQA 229
Query: 532 IKXLNGMMVDGQPMKVQLSTS 594
++ +++D + + V S S
Sbjct: 230 FFKMDNVLIDDRRIHVDFSQS 250
Score = 34.3 bits (75), Expect = 0.076
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 8/65 (12%)
Frame = +1
Query: 151 IFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRN--------YGFVHMENEQVGREAIQNL 306
+F+ L+ TT+ DL +F ++G + C+IVR+ Y F+ +N + +A +
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKM 233
Query: 307 NGELV 321
+ L+
Sbjct: 234 DNVLI 238
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 34.3 bits (75), Expect = 0.076
Identities = 32/148 (21%), Positives = 56/148 (37%), Gaps = 10/148 (6%)
Frame = +1
Query: 199 PLFEKYGTVVXCDIVRNYGFV--HMENEQVGREAIQNLNGELVHGQXXXXXXXXSRKAPS 372
P YG++ NY + ME++ A+Q ++ R+
Sbjct: 368 PAASSYGSLAAAAAAANYSSLLSGMESQHNAAAALQL--AQIQQQAAAALPMVTPREVLG 425
Query: 373 TPTTKIFVGNLTDKTRAPEVRELFXKFGTVVECDIV--------RNYGFVHLDATGDVND 528
+F+ +L + E+ ++F FG +V + + +GFV D
Sbjct: 426 PDGCNLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQA 485
Query: 529 AIKXLNGMMVDGQPMKVQLSTSRVRQRP 612
AI +NG + + +KVQL R RP
Sbjct: 486 AITAMNGFQIGMKRLKVQLKRPRNESRP 513
Score = 33.9 bits (74), Expect = 0.100
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 17/129 (13%)
Frame = +1
Query: 148 KIFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRN-YGFVHME---NEQVGREAIQNLNGE 315
K+F+G + E DLR LFE++G + I+++ Y +H R++
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQAT 89
Query: 316 LVHGQXXXXXXXXSRKA--------PSTP-----TTKIFVGNLTDKTRAPEVRELFXKFG 456
L H Q + + P++P K+F+G L+ + EVR LF FG
Sbjct: 90 L-HDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFG 148
Query: 457 TVVECDIVR 483
+ E ++R
Sbjct: 149 ELDEVTVLR 157
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 385 KIFVGNLTDKTRAPEVRELFXKFGTVVECDIVRN 486
K+FVG + ++R LF +FG + E I+++
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKD 63
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 34.3 bits (75), Expect = 0.076
Identities = 32/148 (21%), Positives = 56/148 (37%), Gaps = 10/148 (6%)
Frame = +1
Query: 199 PLFEKYGTVVXCDIVRNYGFV--HMENEQVGREAIQNLNGELVHGQXXXXXXXXSRKAPS 372
P YG++ NY + ME++ A+Q ++ R+
Sbjct: 368 PAASSYGSLAAAAAAANYSSLLSGMESQHNAAAALQL--AQIQQQAAAALPMVTPREVLG 425
Query: 373 TPTTKIFVGNLTDKTRAPEVRELFXKFGTVVECDIV--------RNYGFVHLDATGDVND 528
+F+ +L + E+ ++F FG +V + + +GFV D
Sbjct: 426 PDGCNLFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDNIHSSQA 485
Query: 529 AIKXLNGMMVDGQPMKVQLSTSRVRQRP 612
AI +NG + + +KVQL R RP
Sbjct: 486 AITAMNGFQIGMKRLKVQLKRPRNESRP 513
Score = 33.9 bits (74), Expect = 0.100
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 17/129 (13%)
Frame = +1
Query: 148 KIFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRN-YGFVHME---NEQVGREAIQNLNGE 315
K+F+G + E DLR LFE++G + I+++ Y +H R++
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQAT 89
Query: 316 LVHGQXXXXXXXXSRKA--------PSTP-----TTKIFVGNLTDKTRAPEVRELFXKFG 456
L H Q + + P++P K+F+G L+ + EVR LF FG
Sbjct: 90 L-HDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFG 148
Query: 457 TVVECDIVR 483
+ E ++R
Sbjct: 149 ELDEVTVLR 157
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 385 KIFVGNLTDKTRAPEVRELFXKFGTVVECDIVRN 486
K+FVG + ++R LF +FG + E I+++
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKD 63
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 34.3 bits (75), Expect = 0.076
Identities = 36/147 (24%), Positives = 60/147 (40%), Gaps = 8/147 (5%)
Frame = +1
Query: 142 TFKIFIGNLSDKTTEADLRPLFEKYGTVVXCDIV------RNYGFVHMENEQVGREAIQN 303
T +F+GN+ E ++R +FE++G V DI Y FV Q +AIQ
Sbjct: 168 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMF---QTVDQAIQA 224
Query: 304 LNGELVHGQXXXXXXXXSRKAPSTPTTKIFVGNLTDKTRAPEVRELFXKFGTV--VECDI 477
E S + ++FVG L +++ F +FG V ++ D
Sbjct: 225 KAEEQDRPIRAGGSRMKIGYGKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENIDYDH 284
Query: 478 VRNYGFVHLDATGDVNDAIKXLNGMMV 558
+ Y +V + T +A + L G +
Sbjct: 285 GQPYAYVVYENTHTSQEACRSLRGACI 311
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 34.3 bits (75), Expect = 0.076
Identities = 36/147 (24%), Positives = 60/147 (40%), Gaps = 8/147 (5%)
Frame = +1
Query: 142 TFKIFIGNLSDKTTEADLRPLFEKYGTVVXCDIV------RNYGFVHMENEQVGREAIQN 303
T +F+GN+ E ++R +FE++G V DI Y FV Q +AIQ
Sbjct: 168 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMF---QTVDQAIQA 224
Query: 304 LNGELVHGQXXXXXXXXSRKAPSTPTTKIFVGNLTDKTRAPEVRELFXKFGTV--VECDI 477
E S + ++FVG L +++ F +FG V ++ D
Sbjct: 225 KAEEQDRPIRAGGSRMKIGYGKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENIDYDH 284
Query: 478 VRNYGFVHLDATGDVNDAIKXLNGMMV 558
+ Y +V + T +A + L G +
Sbjct: 285 GQPYAYVVYENTHTSQEACRSLRGACI 311
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 34.3 bits (75), Expect = 0.076
Identities = 36/147 (24%), Positives = 60/147 (40%), Gaps = 8/147 (5%)
Frame = +1
Query: 142 TFKIFIGNLSDKTTEADLRPLFEKYGTVVXCDIV------RNYGFVHMENEQVGREAIQN 303
T +F+GN+ E ++R +FE++G V DI Y FV Q +AIQ
Sbjct: 145 TRTLFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMF---QTVDQAIQA 201
Query: 304 LNGELVHGQXXXXXXXXSRKAPSTPTTKIFVGNLTDKTRAPEVRELFXKFGTV--VECDI 477
E S + ++FVG L +++ F +FG V ++ D
Sbjct: 202 KAEEQDRPIRAGGSRMKIGYGKSQVSRRLFVGGLGSWCDKEILQKAFGEFGFVENIDYDH 261
Query: 478 VRNYGFVHLDATGDVNDAIKXLNGMMV 558
+ Y +V + T +A + L G +
Sbjct: 262 GQPYAYVVYENTHTSQEACRSLRGACI 288
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 33.9 bits (74), Expect = 0.100
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Frame = +1
Query: 148 KIFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRN-------YGFVHMENEQVGRE 291
+IF+G TTE +LR FEK+ V +V++ YGF+ E E E
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEE 121
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 33.9 bits (74), Expect = 0.100
Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 7/112 (6%)
Frame = +1
Query: 148 KIFIGNLSDKTTEADLRPLFEKYGTVVXCDIV------RNYGFVHME-NEQVGREAIQNL 306
KIF+G +S + DL F +YG V + R+ GF +E G +
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 307 NGELVHGQXXXXXXXXSRKAPSTPTTKIFVGNLTDKTRAPEVRELFXKFGTV 462
+ + G+ + A S K+FVG L ++R F +FG V
Sbjct: 90 REQTIKGKSVEV-----KPAKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKV 136
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 8/57 (14%)
Frame = +1
Query: 148 KIFIGNLSDKTTEADLRPLFEKYGTVVXCD--------IVRNYGFVHMENEQVGREA 294
K+F+G L +E DLR FE++G V + RN+ F+ E E+ +A
Sbjct: 111 KVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 33.9 bits (74), Expect = 0.100
Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 7/112 (6%)
Frame = +1
Query: 148 KIFIGNLSDKTTEADLRPLFEKYGTVVXCDIV------RNYGFVHME-NEQVGREAIQNL 306
KIF+G +S + DL F +YG V + R+ GF +E G +
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 307 NGELVHGQXXXXXXXXSRKAPSTPTTKIFVGNLTDKTRAPEVRELFXKFGTV 462
+ + G+ + A S K+FVG L ++R F +FG V
Sbjct: 90 REQTIKGKSVEV-----KPAKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKV 136
Score = 29.9 bits (64), Expect = 1.6
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 8/57 (14%)
Frame = +1
Query: 148 KIFIGNLSDKTTEADLRPLFEKYGTVVXCD--------IVRNYGFVHMENEQVGREA 294
K+F+G L +E DLR FE++G V + RN+ F+ E E+ +A
Sbjct: 111 KVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 33.9 bits (74), Expect = 0.100
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Frame = +1
Query: 148 KIFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRN-------YGFVHMENEQVGRE 291
+IF+G TTE +LR FEK+ V +V++ YGF+ E E E
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFETEDQAEE 122
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 33.5 bits (73), Expect = 0.13
Identities = 28/130 (21%), Positives = 55/130 (42%), Gaps = 10/130 (7%)
Frame = +1
Query: 262 HMENEQVGREAI-QNLNGELV-HGQXXXXXXXXSRKAPSTPTTKIFVGNLTDKTRAPEVR 435
H E E AI Q + ++ H + + + +F+GN+ + E+
Sbjct: 13 HFEMEIEAESAILQQIQNKMAKHLESAAYVPPTEEEQKAIDAKSVFIGNVDFNSTIEEIE 72
Query: 436 ELFXKFGTVVECDI--------VRNYGFVHLDATGDVNDAIKXLNGMMVDGQPMKVQLST 591
E F G +V+ I +N+ ++ D + + +A+ +NG + +P+ V T
Sbjct: 73 EHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENAL-VMNGSLFRSRPIVV---T 128
Query: 592 SRVRQRPGMG 621
++ PGMG
Sbjct: 129 AKRTNIPGMG 138
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 33.5 bits (73), Expect = 0.13
Identities = 30/129 (23%), Positives = 55/129 (42%), Gaps = 8/129 (6%)
Frame = +1
Query: 259 VHMENEQVGREAIQNLNGELVHGQXXXXXXXXSRKAPSTPTTKIFVGNLTDKTRAPEVRE 438
+ +E E E IQN + + +KA + +F+GN+ + EV E
Sbjct: 22 MEIEAESAILEQIQNKMAKNLESAAYVPPTEEEQKAIDAKS--VFIGNVDFNSTIEEVEE 79
Query: 439 LFXKFGTVVECDI--------VRNYGFVHLDATGDVNDAIKXLNGMMVDGQPMKVQLSTS 594
F G +V I +N+ ++ D + + +A+ +NG + +P+ V T+
Sbjct: 80 HFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENAL-VMNGSLFRSRPIVV---TA 135
Query: 595 RVRQRPGMG 621
+ PGMG
Sbjct: 136 KRTNIPGMG 144
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 33.5 bits (73), Expect = 0.13
Identities = 38/169 (22%), Positives = 66/169 (39%), Gaps = 14/169 (8%)
Frame = +1
Query: 148 KIFIGNLSDKTTEADLRPLFEKYGTV--VXCDIVRNYGFVHMENEQVGREAIQNLNGELV 321
++++G S + +R L + V DIV N H V ++ N L
Sbjct: 10 RLYVGGFSTNLSSEQIRNLITQLAAPFEVSIDIVENGSRKHRGFAFVQCRSLAEANVLLA 69
Query: 322 HGQXXXXXXXXSRKAPSTPTTKIF--VGNLTDK--TRAPEVRELFXKFGT----VVECDI 477
++K P P + + N+ + +R EL+ FG VV+C +
Sbjct: 70 KFSGLFTKVNFAKKEPK-PAENVMSNISNVFVRGISRDMPDTELYQAFGGITDGVVQCHV 128
Query: 478 VRNYGFVHLDATGDVNDAIKXLNGMMVDGQPMKVQL----STSRVRQRP 612
YGFV D + I ++G ++G+ + V + R R+RP
Sbjct: 129 ADGYGFVLFDTRANAQKKIVEMDGKTLNGKLISVSWARPDTVGRKRKRP 177
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 32.7 bits (71), Expect = 0.23
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Frame = +1
Query: 385 KIFVGNLTDKTRAPEVRELFXKFGTVVECDI-------VRNYGFV-HLDATGDVNDAIKX 540
KIF+G L + +V+EL FG + + + Y F +LD T + AI
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPT-LTDQAIAG 350
Query: 541 LNGMMVDGQPMKVQLSTSRVRQRPGMGXP 627
LNGM + + + VQL+ + +QR P
Sbjct: 351 LNGMQLGDKQLVVQLACAN-QQRHNTNLP 378
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 32.7 bits (71), Expect = 0.23
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Frame = +1
Query: 385 KIFVGNLTDKTRAPEVRELFXKFGTVVECDI-------VRNYGFV-HLDATGDVNDAIKX 540
KIF+G L + +V+EL FG + + + Y F +LD T + AI
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPT-LTDQAIAG 350
Query: 541 LNGMMVDGQPMKVQLSTSRVRQRPGMGXP 627
LNGM + + + VQL+ + +QR P
Sbjct: 351 LNGMQLGDKQLVVQLACAN-QQRHNTNLP 378
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 32.7 bits (71), Expect = 0.23
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Frame = +1
Query: 385 KIFVGNLTDKTRAPEVRELFXKFGTVVECDI-------VRNYGFV-HLDATGDVNDAIKX 540
KIF+G L + +V+EL FG + + + Y F +LD T + AI
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPT-LTDQAIAG 325
Query: 541 LNGMMVDGQPMKVQLSTSRVRQRPGMGXP 627
LNGM + + + VQL+ + +QR P
Sbjct: 326 LNGMQLGDKQLVVQLACAN-QQRHNTNLP 353
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 32.7 bits (71), Expect = 0.23
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Frame = +1
Query: 385 KIFVGNLTDKTRAPEVRELFXKFGTVVECDI-------VRNYGFV-HLDATGDVNDAIKX 540
KIF+G L + +V+EL FG + + + Y F +LD T + AI
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPT-LTDQAIAG 328
Query: 541 LNGMMVDGQPMKVQLSTSRVRQRPGMGXP 627
LNGM + + + VQL+ + +QR P
Sbjct: 329 LNGMQLGDKQLVVQLACAN-QQRHNTNLP 356
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 32.3 bits (70), Expect = 0.30
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 148 KIFIGNLSDKTTEADLRPLFEKYGTVVXCDIVR 246
KI + N+S K T++ L+ F +YG + C + R
Sbjct: 113 KIVVSNISAKVTQSQLQSFFSQYGKITSCILPR 145
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 32.3 bits (70), Expect = 0.30
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Frame = +1
Query: 151 IFIGNLSDKTTEADLRPLFEKYGTVVXCDIVRN--------YGFVHMENEQVGREAIQNL 306
I+IG LS +E D+ +F +YG V+ +++R+ + F+ ++++ A+ N
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNF 99
Query: 307 NGELVHGQXXXXXXXXSRKAP 369
NG +H + K P
Sbjct: 100 NGISLHKRMIRVDHVEEYKVP 120
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 30.7 bits (66), Expect = 0.93
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +1
Query: 142 TFKIFIGNLSDKTTEADLRPLFEKYGTVVXCDIV 243
T ++F+ NL T E DL+ LF+KYG V +V
Sbjct: 278 TGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVV 311
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 142 TFKIFIGNLSDKTTEADLRPLFEKYGTV 225
T ++ + NL TE LR FEKYG +
Sbjct: 2 TTRLIVKNLPSTCTEQQLRKFFEKYGQI 29
Score = 27.9 bits (59), Expect = 6.6
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +1
Query: 487 YGFVHLDATGDVNDAIKXLNGMMVDGQPMKVQLS 588
+GFV D A+K + G ++DG +++++S
Sbjct: 691 FGFVQFYTAFDAKTALKDMQGELLDGHSLELKIS 724
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 8/68 (11%)
Frame = +1
Query: 151 IFIGNLSDKTTEADLRPLFEKYGTVVXCDI--------VRNYGFVHMENEQVGREAIQNL 306
+F+ N+ ++ TE D+ F +YG + + ++ Y V E ++ EAI
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 307 NGELVHGQ 330
N + GQ
Sbjct: 117 NDTDLLGQ 124
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 487 YGFVHLDATGDVNDAIKXLNGMMVDGQPMKVQLSTSR 597
+GFV + +AI +NG + + +KVQL R
Sbjct: 378 FGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVDR 414
Score = 27.5 bits (58), Expect = 8.7
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 8/62 (12%)
Frame = +1
Query: 151 IFIGNLSDKTTEADLRPLFEKYGTV----VXCDIVRN----YGFVHMENEQVGREAIQNL 306
+FI +L ++DL F +G + V D V N +GFV EN Q AI +
Sbjct: 337 LFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAISAM 396
Query: 307 NG 312
NG
Sbjct: 397 NG 398
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +1
Query: 388 IFVGNLTDKTRAPEVRELFXKFGTV--VECDIVRNYGF 495
+F+G L A E+ ++F +FG V V DI ++YG+
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGY 358
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +1
Query: 388 IFVGNLTDKTRAPEVRELFXKFGTV--VECDIVRNYGF 495
+F+G L A E+ ++F +FG V V DI ++YG+
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGY 358
>AC024845-1|AAF60850.2| 347|Caenorhabditis elegans Hypothetical
protein Y65B4BL.3 protein.
Length = 347
Score = 29.5 bits (63), Expect = 2.1
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = +2
Query: 59 LVFXFLTCVIYCYSLYIVTHNLKCR 133
L+F F++C ++ Y++Y+V H + +
Sbjct: 104 LIFFFISCTMFLYAVYLVKHETELK 128
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 8/81 (9%)
Frame = +1
Query: 385 KIFVGNLTDKTRAPEVRELFXKFGTVVECDIVRN--------YGFVHLDATGDVNDAIKX 540
++F G+L ++ + + F K+ + + +VR YGFV + D A++
Sbjct: 204 RVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMRE 263
Query: 541 LNGMMVDGQPMKVQLSTSRVR 603
++G V +P+K++ S + R
Sbjct: 264 MDGKYVGNRPIKLRKSAWKER 284
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Frame = +1
Query: 145 FKIFIGNLSDKTTEADLRPLFEKYGTVVXCDIVR--------NYGFVHMENEQVGREAIQ 300
F++F G+L ++ ++ L F KY + +VR YGFV + + A++
Sbjct: 203 FRVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMR 262
Query: 301 NLNGELV 321
++G+ V
Sbjct: 263 EMDGKYV 269
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +1
Query: 388 IFVGNLTDKTRAPEVRELFXKFGTV--VECDIVRNYGF 495
+F+G L A E+ ++F +FG V V DI ++YG+
Sbjct: 107 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGY 144
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +1
Query: 388 IFVGNLTDKTRAPEVRELFXKFGTV--VECDIVRNYGF 495
+F+G L A E+ ++F +FG V V DI ++YG+
Sbjct: 321 VFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGY 358
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 28.7 bits (61), Expect = 3.8
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 10/81 (12%)
Frame = +1
Query: 370 STP--TTKIFVGNLTDKTRAPEVRELFXKFGTVVECDIV--------RNYGFVHLDATGD 519
STP +T +++ L T +RE+ K+G + + + YGFV ++
Sbjct: 75 STPLSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQA 134
Query: 520 VNDAIKXLNGMMVDGQPMKVQ 582
A+ LN V Q K+Q
Sbjct: 135 AAAAVDGLNTEGVQAQMAKLQ 155
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 28.7 bits (61), Expect = 3.8
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 5/78 (6%)
Frame = +1
Query: 361 KAPSTPTTKIFVGNLTDKTRAPEVRELFXKFGTVVECDI-----VRNYGFVHLDATGDVN 525
K P +++ NL K E+ E+F KFG V + + R FV + D
Sbjct: 12 KLPPEVNRILYIKNLPYKITTEEMYEIFGKFGAVRQIRVGNTAETRGTAFVVYEDIFDAK 71
Query: 526 DAIKXLNGMMVDGQPMKV 579
A + L+G V + + V
Sbjct: 72 TACEHLSGYNVSNRYLVV 89
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 28.3 bits (60), Expect = 5.0
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 9/80 (11%)
Frame = +1
Query: 370 STPT-TKIFVGNLTDKTRAPEVRELFXKFGTVVECDIV--------RNYGFVHLDATGDV 522
+TP+ T +++ L T +RE+ K+G + + + YGFV ++
Sbjct: 102 TTPSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAA 161
Query: 523 NDAIKXLNGMMVDGQPMKVQ 582
A+ LN V Q K+Q
Sbjct: 162 AAAVDGLNTEGVQAQMAKLQ 181
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 27.9 bits (59), Expect = 6.6
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 8/68 (11%)
Frame = +1
Query: 151 IFIGNLSDKTTEADLRPLFEKYGTVVXCDIV--------RNYGFVHMENEQVGREAIQNL 306
+++G ++ TE L F +G VV I R +GFV + + AI N+
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNM 72
Query: 307 NGELVHGQ 330
N + G+
Sbjct: 73 NESELFGK 80
>AC006801-2|AAF60751.1| 914|Caenorhabditis elegans Hypothetical
protein Y52D5A.1 protein.
Length = 914
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +1
Query: 73 FNLCYILLFFVHSNP*SKMPGTGTFKI-FIGNL 168
F+L I +F SN K+P +GTF + +IGN+
Sbjct: 616 FDLPVIYIFLKMSNSIFKLPASGTFVLMYIGNV 648
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,233,576
Number of Sequences: 27780
Number of extensions: 255936
Number of successful extensions: 926
Number of sequences better than 10.0: 100
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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