Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_E17
         (352 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001461-1|AAN71216.1|   56|Drosophila melanogaster GM20929p pro...    62   1e-10
AE013599-856|AAZ52820.1|   40|Drosophila melanogaster CG33774-PA...    60   6e-10
AE014297-2099|AAF55244.2| 1417|Drosophila melanogaster CG31183-P...    28   3.8  

>BT001461-1|AAN71216.1|   56|Drosophila melanogaster GM20929p
           protein.
          Length = 56

 Score = 62.5 bits (145), Expect = 1e-10
 Identities = 26/35 (74%), Positives = 32/35 (91%)
 Frame = +2

Query: 77  KMITDIQLAVFSNILGVSIFLLVILYHYINANSSK 181
           KMITD+QLA+FSN+LGV +FLLV+ YHYINAN+ K
Sbjct: 16  KMITDVQLAIFSNVLGVFLFLLVVAYHYINANTGK 50


>AE013599-856|AAZ52820.1|   40|Drosophila melanogaster CG33774-PA
           protein.
          Length = 40

 Score = 60.5 bits (140), Expect = 6e-10
 Identities = 25/34 (73%), Positives = 31/34 (91%)
 Frame = +2

Query: 80  MITDIQLAVFSNILGVSIFLLVILYHYINANSSK 181
           MITD+QLA+FSN+LGV +FLLV+ YHYINAN+ K
Sbjct: 1   MITDVQLAIFSNVLGVFLFLLVVAYHYINANTGK 34


>AE014297-2099|AAF55244.2| 1417|Drosophila melanogaster CG31183-PA
           protein.
          Length = 1417

 Score = 27.9 bits (59), Expect = 3.8
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +1

Query: 58  FKTSNSKNDHRHPARGFLQHFGSL 129
           FKT  +KN H+  +   +QHF SL
Sbjct: 49  FKTPETKNSHKSQSTELVQHFPSL 72


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,613,349
Number of Sequences: 53049
Number of extensions: 179051
Number of successful extensions: 281
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 281
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 838265760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)