Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_E16
         (445 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P15215 Cluster: Laminin subunit gamma-1 precursor; n=16...    35   0.91 
UniRef50_A6LMR0 Cluster: Putative uncharacterized protein; n=1; ...    33   2.1  
UniRef50_Q4PAL6 Cluster: Putative uncharacterized protein; n=1; ...    33   2.8  
UniRef50_UPI00006A290D Cluster: UPI00006A290D related cluster; n...    32   6.4  
UniRef50_Q810P4 Cluster: Slc36a3 protein (Solute carrier family ...    32   6.4  
UniRef50_Q0UU23 Cluster: Putative uncharacterized protein; n=1; ...    32   6.4  
UniRef50_Q4S162 Cluster: Chromosome 13 SCAF14769, whole genome s...    31   8.5  

>UniRef50_P15215 Cluster: Laminin subunit gamma-1 precursor; n=16;
           Endopterygota|Rep: Laminin subunit gamma-1 precursor -
           Drosophila melanogaster (Fruit fly)
          Length = 1639

 Score = 34.7 bits (76), Expect = 0.91
 Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 9/51 (17%)
 Frame = +3

Query: 63  CSPGFRVSQASAGELH--VPCSC------CIYRSGRC-CVHRTPGVLCVLC 188
           C+PG+R S A  G     +PC C      C   +GRC C H T G  C  C
Sbjct: 724 CAPGYRHSPARGGPFMPCIPCDCHGHADICDSETGRCICQHNTHGDNCDQC 774


>UniRef50_A6LMR0 Cluster: Putative uncharacterized protein; n=1;
           Thermosipho melanesiensis BI429|Rep: Putative
           uncharacterized protein - Thermosipho melanesiensis
           BI429
          Length = 181

 Score = 33.5 bits (73), Expect = 2.1
 Identities = 15/47 (31%), Positives = 27/47 (57%)
 Frame = -2

Query: 393 FTIQVQDFKRQAEKKISRELYFFVLESNK*NISHQHIWFHEFRRIFI 253
           F I++ +F   +EK I+   + FVL S+  +I H H   H+F ++ +
Sbjct: 24  FIIRLVNFGMPSEKIIAWGFFIFVLSSDMPDIDHNHSLLHKFVKLLV 70


>UniRef50_Q4PAL6 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 525

 Score = 33.1 bits (72), Expect = 2.8
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = -1

Query: 208 SMQPENMQSTQSTPGVRCTQQR-PERYMQQLQGTCSSPAEAWLTRKPGEQRRS 53
           S+ PE    T +  G R T    P+R +++L  TC SP   W   KP ++R S
Sbjct: 250 SLDPEE---TSTQVGDRATAAPDPQRAIEELGVTCDSPLNTWTAGKPLDERAS 299


>UniRef50_UPI00006A290D Cluster: UPI00006A290D related cluster; n=1;
           Xenopus tropicalis|Rep: UPI00006A290D UniRef100 entry -
           Xenopus tropicalis
          Length = 303

 Score = 31.9 bits (69), Expect = 6.4
 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
 Frame = -1

Query: 226 MRMSMRSMQPENMQSTQSTPGVRCTQQRPERYM-QQLQGTCSSPAEAWLTRKPGEQRRSS 50
           +R  M+  QP  +Q  QS PG    QQ+P+R M QQ +     P +A  + +PG  ++  
Sbjct: 213 IRQPMQQQQPP-LQQRQSVPGAPQQQQQPQRPMTQQPRPNPQGPGQA--SSRPGGPQKPQ 269

Query: 49  I 47
           +
Sbjct: 270 V 270


>UniRef50_Q810P4 Cluster: Slc36a3 protein (Solute carrier family 36
           (Proton\/amino acid symporter), member 3); n=2;
           Murinae|Rep: Slc36a3 protein (Solute carrier family 36
           (Proton\/amino acid symporter), member 3) - Mus musculus
           (Mouse)
          Length = 102

 Score = 31.9 bits (69), Expect = 6.4
 Identities = 16/54 (29%), Positives = 26/54 (48%)
 Frame = -1

Query: 247 KCNKNMVMRMSMRSMQPENMQSTQSTPGVRCTQQRPERYMQQLQGTCSSPAEAW 86
           KC +NM  R +  S    N +S+ ST   +  ++  +  M+ L     SP +AW
Sbjct: 12  KCQRNMFGRSTASSKGSSNSRSSSSTSPKKGPRREADALMEALWQQRGSPPDAW 65


>UniRef50_Q0UU23 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 726

 Score = 31.9 bits (69), Expect = 6.4
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = +3

Query: 114 PCSCCIYRSGRCCVHRTPGVLCVLCIF 194
           PC  C  R  RC +H     LCVLC F
Sbjct: 59  PCDACRRRKSRCVIHE-GAALCVLCEF 84


>UniRef50_Q4S162 Cluster: Chromosome 13 SCAF14769, whole genome
            shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
            Chromosome 13 SCAF14769, whole genome shotgun sequence -
            Tetraodon nigroviridis (Green puffer)
          Length = 1873

 Score = 31.5 bits (68), Expect = 8.5
 Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 13/55 (23%)
 Frame = +3

Query: 63   CSPGFRVSQASAGELHVPCSC-----------CIYRSGRC--CVHRTPGVLCVLC 188
            CSPG+  +   AG    PC C           C  RSG C  C+H + G  C  C
Sbjct: 1014 CSPGYYGNPGEAGGQCQPCRCNGNIDVLDPGSCDSRSGECLLCLHHSEGPACESC 1068


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 311,169,726
Number of Sequences: 1657284
Number of extensions: 4739683
Number of successful extensions: 14554
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14544
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 22761518346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)