Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_E16
(445 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M58417-1|AAA28665.1| 1639|Drosophila melanogaster laminin B2 cha... 35 0.057
M25063-1|AAA28664.1| 1639|Drosophila melanogaster protein ( Dros... 35 0.057
BT021394-1|AAX33542.1| 1639|Drosophila melanogaster LD15803p pro... 35 0.057
AE014296-1694|AAF50238.1| 1639|Drosophila melanogaster CG3322-PA... 35 0.057
L07288-1|AAC37178.1| 3712|Drosophila melanogaster laminin A prot... 30 1.2
AY102693-1|AAM27522.1| 433|Drosophila melanogaster LD45181p pro... 29 3.8
AE014297-1932|AAF55129.1| 433|Drosophila melanogaster CG6912-PA... 29 3.8
BT024391-1|ABC86453.1| 144|Drosophila melanogaster IP05345p pro... 28 6.6
AY051929-1|AAK93353.1| 509|Drosophila melanogaster LD41216p pro... 28 6.6
AE014297-2605|AAF55614.2| 509|Drosophila melanogaster CG5451-PA... 28 6.6
>M58417-1|AAA28665.1| 1639|Drosophila melanogaster laminin B2 chain
protein.
Length = 1639
Score = 34.7 bits (76), Expect = 0.057
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 9/51 (17%)
Frame = +3
Query: 63 CSPGFRVSQASAGELH--VPCSC------CIYRSGRC-CVHRTPGVLCVLC 188
C+PG+R S A G +PC C C +GRC C H T G C C
Sbjct: 724 CAPGYRHSPARGGPFMPCIPCDCHGHADICDSETGRCICQHNTHGDNCDQC 774
>M25063-1|AAA28664.1| 1639|Drosophila melanogaster protein (
Drosophila mRNA forlaminin B2 chain. ).
Length = 1639
Score = 34.7 bits (76), Expect = 0.057
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 9/51 (17%)
Frame = +3
Query: 63 CSPGFRVSQASAGELH--VPCSC------CIYRSGRC-CVHRTPGVLCVLC 188
C+PG+R S A G +PC C C +GRC C H T G C C
Sbjct: 724 CAPGYRHSPARGGPFMPCIPCDCHGHADICDSETGRCICQHNTHGDNCDQC 774
>BT021394-1|AAX33542.1| 1639|Drosophila melanogaster LD15803p
protein.
Length = 1639
Score = 34.7 bits (76), Expect = 0.057
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 9/51 (17%)
Frame = +3
Query: 63 CSPGFRVSQASAGELH--VPCSC------CIYRSGRC-CVHRTPGVLCVLC 188
C+PG+R S A G +PC C C +GRC C H T G C C
Sbjct: 724 CAPGYRHSPARGGPFMPCIPCDCHGHADICDSETGRCICQHNTHGDNCDQC 774
>AE014296-1694|AAF50238.1| 1639|Drosophila melanogaster CG3322-PA
protein.
Length = 1639
Score = 34.7 bits (76), Expect = 0.057
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 9/51 (17%)
Frame = +3
Query: 63 CSPGFRVSQASAGELH--VPCSC------CIYRSGRC-CVHRTPGVLCVLC 188
C+PG+R S A G +PC C C +GRC C H T G C C
Sbjct: 724 CAPGYRHSPARGGPFMPCIPCDCHGHADICDSETGRCICQHNTHGDNCDQC 774
>L07288-1|AAC37178.1| 3712|Drosophila melanogaster laminin A protein.
Length = 3712
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 13/55 (23%)
Frame = +3
Query: 63 CSPGFRVSQASAGELHVPCSC-----------CIYRSGRC--CVHRTPGVLCVLC 188
C+ GF S GE+ PC C C R+G C C++ T G C LC
Sbjct: 1899 CANGFYGEPESIGEVCKPCECSGNINPEDQGSCDTRTGECLRCLNNTFGAACNLC 1953
>AY102693-1|AAM27522.1| 433|Drosophila melanogaster LD45181p
protein.
Length = 433
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 6/43 (13%)
Frame = +3
Query: 69 PGFRVS--QASAGEL----HVPCSCCIYRSGRCCVHRTPGVLC 179
P R S Q++A E+ H P CC +S R C++ P +C
Sbjct: 274 PSLRPSTEQSAANEVFPGRHPPPQCCFVKSPRICINYAPNWVC 316
>AE014297-1932|AAF55129.1| 433|Drosophila melanogaster CG6912-PA
protein.
Length = 433
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 6/43 (13%)
Frame = +3
Query: 69 PGFRVS--QASAGEL----HVPCSCCIYRSGRCCVHRTPGVLC 179
P R S Q++A E+ H P CC +S R C++ P +C
Sbjct: 274 PSLRPSTEQSAANEVFPGRHPPPQCCFVKSPRICINYAPNWVC 316
>BT024391-1|ABC86453.1| 144|Drosophila melanogaster IP05345p
protein.
Length = 144
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1
Query: 4 SVTLRRTKQTIKMFKYLIFVALLAFASAKP 93
S T + ++++ MFK ++ ALLA A A+P
Sbjct: 4 STTQTKKQKSLNMFKLVVLSALLAVAVARP 33
>AY051929-1|AAK93353.1| 509|Drosophila melanogaster LD41216p
protein.
Length = 509
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Frame = -1
Query: 253 LIKCNKNMVMRM-SMRSMQPENMQSTQSTPGVRCTQQRPERYM---QQLQGTCSSPAEAW 86
L+ + +V+ + +R + Q+ P QQ PERY+ LQ P EA+
Sbjct: 73 LLNLYEQIVLELIELRELGAARSLLRQTDPMTMLKQQEPERYIHLENMLQRAYFDPREAY 132
Query: 85 LTRKPGEQRRSSI 47
E+RR+ I
Sbjct: 133 AEGSSKEKRRTVI 145
>AE014297-2605|AAF55614.2| 509|Drosophila melanogaster CG5451-PA
protein.
Length = 509
Score = 27.9 bits (59), Expect = 6.6
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Frame = -1
Query: 253 LIKCNKNMVMRM-SMRSMQPENMQSTQSTPGVRCTQQRPERYM---QQLQGTCSSPAEAW 86
L+ + +V+ + +R + Q+ P QQ PERY+ LQ P EA+
Sbjct: 73 LLNLYEQIVLELIELRELGAARSLLRQTDPMTMLKQQEPERYIHLENMLQRAYFDPREAY 132
Query: 85 LTRKPGEQRRSSI 47
E+RR+ I
Sbjct: 133 AEGSSKEKRRTVI 145
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,758,167
Number of Sequences: 53049
Number of extensions: 216193
Number of successful extensions: 795
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 795
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1438687674
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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