Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_E14
         (616 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024810-8|AAU20830.1| 1446|Caenorhabditis elegans Hypothetical ...    29   2.6  
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p...    29   3.5  
AL032648-6|CAC35867.1|  244|Caenorhabditis elegans Hypothetical ...    29   3.5  
AF303259-1|AAG50217.1|  244|Caenorhabditis elegans 2O16 protein.       29   3.5  
AC024136-5|AAF35964.4|  257|Caenorhabditis elegans Hypothetical ...    28   4.6  
Z99276-2|CAB16482.1|  388|Caenorhabditis elegans Hypothetical pr...    28   6.1  
AL023843-2|CAA19523.1|  388|Caenorhabditis elegans Hypothetical ...    28   6.1  

>AC024810-8|AAU20830.1| 1446|Caenorhabditis elegans Hypothetical
            protein Y54E10A.11 protein.
          Length = 1446

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
 Frame = +2

Query: 374  NEDMDTMRNFEQVFVKLMRRYKYLEKMFEQEMKKVLVYLKGFDPEQRIK-LARMT 535
            +EDMDT    E +++K     +Y+EK+FE    +    L  FD  ++ + LA +T
Sbjct: 878  SEDMDT--KIETIYLKTDTPLEYVEKVFEASQSENSFPLFQFDQSKKYEWLANLT 930


>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
           protein T19D12.1 protein.
          Length = 1844

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -2

Query: 393 MVSISSLAEKMQVLVLGDSPSIDTEPPGSSRPPAMSTSNMTSP 265
           +VS SS      V+    +PS    P  +S  P  STSN T+P
Sbjct: 466 VVSSSSSGSSSTVVTSTITPSTQGVPTSTSNQPTPSTSNPTTP 508


>AL032648-6|CAC35867.1|  244|Caenorhabditis elegans Hypothetical
           protein Y54G9A.7 protein.
          Length = 244

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 4/46 (8%)
 Frame = +2

Query: 395 RNFEQVFVKLMR--RYKYL--EKMFEQEMKKVLVYLKGFDPEQRIK 520
           R +++ F K  +  R K L  E+ F++ MK +L  L+ F+PE+ +K
Sbjct: 127 RRYDRDFFKYQKYHREKKLKSEREFQKRMKSLLTELEAFNPEKYVK 172


>AF303259-1|AAG50217.1|  244|Caenorhabditis elegans 2O16 protein.
          Length = 244

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 4/46 (8%)
 Frame = +2

Query: 395 RNFEQVFVKLMR--RYKYL--EKMFEQEMKKVLVYLKGFDPEQRIK 520
           R +++ F K  +  R K L  E+ F++ MK +L  L+ F+PE+ +K
Sbjct: 127 RRYDRDFFKYQKYHREKKLKSEREFQKRMKSLLTELEAFNPEKYVK 172


>AC024136-5|AAF35964.4|  257|Caenorhabditis elegans Hypothetical
           protein F54A3.2 protein.
          Length = 257

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = -1

Query: 556 SVTDPQCSHARQLDAL--FGIEAFQVDQNLFHFLFEHFFQVLVPTHQF 419
           +V D   S   Q D +  FGI + +  + L HFL+ +F +   P  QF
Sbjct: 170 AVADTTTSERLQKDLIDWFGIPSPESKKTLLHFLYAYFCRQCTPDIQF 217


>Z99276-2|CAB16482.1|  388|Caenorhabditis elegans Hypothetical
           protein Y52D3.1a protein.
          Length = 388

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 13/60 (21%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
 Frame = +2

Query: 380 DMDTMRNFEQVFVKLMRR-YKYLEKMFEQEMKKVLVYLKGFDPEQRIKLARM-TALWIGN 553
           DM ++++ +++ + +  R  ++L + F +EM + +     +DP+QR   + + ++ W+G+
Sbjct: 278 DMISLKDDQKMGLDISHRPQEHLTRRFSKEMHEFIANCLDYDPQQRGSASDLKSSAWLGS 337


>AL023843-2|CAA19523.1|  388|Caenorhabditis elegans Hypothetical
           protein Y52D3.1a protein.
          Length = 388

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 13/60 (21%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
 Frame = +2

Query: 380 DMDTMRNFEQVFVKLMRR-YKYLEKMFEQEMKKVLVYLKGFDPEQRIKLARM-TALWIGN 553
           DM ++++ +++ + +  R  ++L + F +EM + +     +DP+QR   + + ++ W+G+
Sbjct: 278 DMISLKDDQKMGLDISHRPQEHLTRRFSKEMHEFIANCLDYDPQQRGSASDLKSSAWLGS 337


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,102,199
Number of Sequences: 27780
Number of extensions: 305039
Number of successful extensions: 1144
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1044
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1144
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)