Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_E14
         (616 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor prot...    23   3.1  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   7.2  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   9.6  

>S76958-1|AAB33933.1|   90|Apis mellifera olfactory receptor
           protein.
          Length = 90

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +2

Query: 518 KLARMTALWIGNGC 559
           KL RMT  W+G  C
Sbjct: 1   KLWRMTGTWVGGFC 14


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +1

Query: 421 TDASVQVLGKNVRTGNEKGSGL 486
           TDASV  L  NVR  + K S L
Sbjct: 414 TDASVPSLVSNVRITSVKSSEL 435


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +3

Query: 48  CLISTILYESXGXKTSIIGSTDQDQK 125
           CL STIL ES G     +     D +
Sbjct: 17  CLASTILSESAGTSCKWLSEGGNDTR 42


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,722
Number of Sequences: 438
Number of extensions: 4256
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)