Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_E13
(616 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17; Eukaryo... 229 3e-59
UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86; Eukaryo... 194 1e-48
UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55; Eukaryo... 165 7e-40
UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1; Dictyost... 148 1e-34
UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6; Eukary... 146 4e-34
UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1; ... 138 7e-32
UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2; E... 134 1e-30
UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40; Eukar... 133 3e-30
UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lambl... 132 6e-30
UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillard... 127 2e-28
UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S riboso... 116 6e-25
UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, wh... 114 1e-24
UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonch... 106 5e-22
UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14; Euryar... 104 1e-21
UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3; Archaea... 104 2e-21
UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1; Encephal... 103 4e-21
UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2; Tr... 96 5e-19
UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella... 91 2e-17
UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4; Euryarc... 86 7e-16
UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8; Thermop... 84 3e-15
UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2; Methano... 83 4e-15
UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5; Halobac... 83 5e-15
UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S riboso... 81 2e-14
UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1; Cenarch... 81 2e-14
UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4; Methano... 79 1e-13
UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2; Thermoprotei... 77 3e-13
UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2; environ... 76 6e-13
UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1; Thermop... 75 2e-12
UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1; Nanoarc... 71 2e-11
UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5; Thermop... 71 2e-11
UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus N... 69 9e-11
UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellula... 69 9e-11
UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3; Thermop... 64 2e-09
UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1; ... 58 2e-07
UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S riboso... 53 6e-06
UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A, S... 46 5e-04
UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6; Proteoba... 40 0.036
UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=... 39 0.082
UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 38 0.19
UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132, w... 37 0.33
UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular... 36 0.58
UniRef50_UPI0000499CA8 Cluster: BspA-like leucine rich repeat pr... 36 1.0
UniRef50_Q8R7W9 Cluster: 50S ribosomal protein L6; n=22; Bacteri... 36 1.0
UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3; Planctom... 36 1.0
UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3; Thermoto... 34 3.1
UniRef50_Q11HR7 Cluster: 50S ribosomal protein L6; n=73; Proteob... 34 3.1
UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108; Proteo... 34 3.1
UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34; Bacteri... 34 3.1
UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16; Firmicu... 33 4.1
UniRef50_Q5ZYR8 Cluster: Long chain acyl-CoA dehydrogenase; n=4;... 33 5.4
UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7; Bacteria... 33 5.4
UniRef50_UPI000049A544 Cluster: DNA-directed RNA polymerase III ... 32 9.4
UniRef50_Q8XPL8 Cluster: Putative surface-exposed adhesin protei... 32 9.4
UniRef50_Q847P4 Cluster: 50S ribosomal protein L6; n=1; Aster ye... 32 9.4
UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6; Bacteria... 32 9.4
UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40; Bacteri... 32 9.4
UniRef50_Q5FM76 Cluster: 50S ribosomal protein L6; n=10; Firmicu... 32 9.4
>UniRef50_P50882 Cluster: 60S ribosomal protein L9; n=17;
Eukaryota|Rep: 60S ribosomal protein L9 - Drosophila
melanogaster (Fruit fly)
Length = 190
Score = 229 bits (561), Expect = 3e-59
Identities = 109/133 (81%), Positives = 118/133 (88%)
Frame = +1
Query: 199 KVEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFPINCVTTEGNSIIXIR 378
KVEKWFG+KKELAAVRTVCSH+ NMIKGVT GFQY MRAVYAHFPINCVT+E N++I IR
Sbjct: 54 KVEKWFGTKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIR 113
Query: 379 NFLGXKYITRVKMAPGVTVVNSPKQKDELIIEGNSLEHVSSSAALIQQSTTVNNXDITKF 558
NFLG KYI RV+MAPGVTVVNS QKDELI+EGN +E VS SAALIQQSTTV N DI KF
Sbjct: 114 NFLGEKYIRRVEMAPGVTVVNSTAQKDELIVEGNDIESVSGSAALIQQSTTVKNKDIRKF 173
Query: 559 LDGLYVSDKTTVV 597
LDGLYVS+KTTVV
Sbjct: 174 LDGLYVSEKTTVV 186
Score = 55.6 bits (128), Expect = 9e-07
Identities = 26/52 (50%), Positives = 37/52 (71%)
Frame = +2
Query: 38 MKQIVANXKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRS 193
M+ I +N VKIP + VK+R+VT+ G RG LKR+FKHLA+D+ M + R+
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRT 52
>UniRef50_P32969 Cluster: 60S ribosomal protein L9; n=86;
Eukaryota|Rep: 60S ribosomal protein L9 - Homo sapiens
(Human)
Length = 192
Score = 194 bits (473), Expect = 1e-48
Identities = 92/139 (66%), Positives = 109/139 (78%)
Frame = +1
Query: 178 GKPSLSCKVEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFPINCVTTEG 357
GK +V+KW+G++KELA VRT+CSHV NMIKGVT GF+Y MR+VYAHFPIN V E
Sbjct: 49 GKKKKRLRVDKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQEN 108
Query: 358 NSIIXIRNFLGXKYITRVKMAPGVTVVNSPKQKDELIIEGNSLEHVSSSAALIQQSTTVN 537
S++ IRNFLG KYI RV+M PGV S QKDELI+EGN +E VS+SAALIQQ+TTV
Sbjct: 109 GSLVEIRNFLGEKYIRRVRMRPGVACSVSQAQKDELILEGNDIELVSNSAALIQQATTVK 168
Query: 538 NXDITKFLDGLYVSDKTTV 594
N DI KFLDG+YVS+K TV
Sbjct: 169 NKDIRKFLDGIYVSEKGTV 187
Score = 52.8 bits (121), Expect = 6e-06
Identities = 24/57 (42%), Positives = 38/57 (66%)
Frame = +2
Query: 38 MKQIVANXKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRSPARLR 208
MK I++N V IP+ + + +K R V VKGPRG L+R+F H+ V++ ++ + RLR
Sbjct: 1 MKTILSNQTVDIPENVDITLKGRTVIVKGPRGTLRRDFNHINVELSLLG-KKKKRLR 56
>UniRef50_P49210 Cluster: 60S ribosomal protein L9; n=55;
Eukaryota|Rep: 60S ribosomal protein L9 - Oryza sativa
subsp. japonica (Rice)
Length = 190
Score = 165 bits (401), Expect = 7e-40
Identities = 76/132 (57%), Positives = 97/132 (73%)
Frame = +1
Query: 199 KVEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFPINCVTTEGNSIIXIR 378
+V+ WFG+++ +AA+RT SHV N+I GVTKG++Y MR VYAHFPIN T N+ I IR
Sbjct: 55 QVDAWFGTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIR 114
Query: 379 NFLGXKYITRVKMAPGVTVVNSPKQKDELIIEGNSLEHVSSSAALIQQSTTVNNXDITKF 558
NFLG K + +V M GVT++ S K KDEL+++GN +E VS SAALI Q V N DI KF
Sbjct: 115 NFLGEKKVRKVDMLEGVTILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKF 174
Query: 559 LDGLYVSDKTTV 594
LDG+YVSDK T+
Sbjct: 175 LDGIYVSDKGTI 186
Score = 59.3 bits (137), Expect = 7e-08
Identities = 25/48 (52%), Positives = 39/48 (81%)
Frame = +2
Query: 38 MKQIVANXKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMV 181
MK I+A+ ++IP+G+TV V +++VTV+GPRG L RNFKHL +D +++
Sbjct: 1 MKTILASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLL 48
>UniRef50_Q54XI5 Cluster: 60S ribosomal protein L9; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L9 - Dictyostelium discoideum AX4
Length = 206
Score = 148 bits (358), Expect = 1e-34
Identities = 64/139 (46%), Positives = 96/139 (69%)
Frame = +1
Query: 178 GKPSLSCKVEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFPINCVTTEG 357
GK L+ V+ WFG++K++A ++T+ S + NMI GVTKG++Y MR VYAHFPIN T+G
Sbjct: 67 GKKELT--VDLWFGNRKQIACIKTITSIIENMITGVTKGYEYKMRFVYAHFPINVAVTDG 124
Query: 358 NSIIXIRNFLGXKYITRVKMAPGVTVVNSPKQKDELIIEGNSLEHVSSSAALIQQSTTVN 537
++ IRNF G K + R+++ G+T + K KDE+++ GNSLE +S S A IQ + +
Sbjct: 125 GRVVEIRNFFGEKIVRRIELLDGITCYRNEKAKDEIVLTGNSLELLSQSCATIQLRSAIK 184
Query: 538 NXDITKFLDGLYVSDKTTV 594
D+ KFLDG+YVS++ +
Sbjct: 185 YKDVRKFLDGIYVSERNVL 203
Score = 41.1 bits (92), Expect = 0.020
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +2
Query: 83 LTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPR 190
+TV VK R V V GPRG L ++F H +VDI +V +
Sbjct: 34 VTVDVKGRSVKVTGPRGTLSKSFDHASVDINLVGKK 69
>UniRef50_Q10232 Cluster: 60S ribosomal protein L9-A; n=6;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 190
Score = 146 bits (354), Expect = 4e-34
Identities = 71/128 (55%), Positives = 90/128 (70%)
Frame = +1
Query: 211 WFGSKKELAAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFPINCVTTEGNSIIXIRNFLG 390
W GS+K A +R+V S + NMI GVT+GF+Y MR VYAHFPIN TE +++ IRNFLG
Sbjct: 58 WHGSRKHNACIRSVYSIINNMIIGVTQGFRYKMRLVYAHFPININLTENGTVVEIRNFLG 117
Query: 391 XKYITRVKMAPGVTVVNSPKQKDELIIEGNSLEHVSSSAALIQQSTTVNNXDITKFLDGL 570
+ +K PGVTV S KDE+I+EGNSLE+VS SAA I+Q V N DI KFLDG+
Sbjct: 118 ERITRVIKCLPGVTVSISSAVKDEIILEGNSLENVSQSAANIKQICNVRNKDIRKFLDGI 177
Query: 571 YVSDKTTV 594
YVS++ +
Sbjct: 178 YVSERGNI 185
Score = 47.6 bits (108), Expect = 2e-04
Identities = 19/45 (42%), Positives = 32/45 (71%)
Frame = +2
Query: 41 KQIVANXKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIR 175
+ I + + IP G+TV +K+R VTV GPRG LK+N +H+ ++++
Sbjct: 3 RDIYKDETLTIPKGVTVDIKARNVTVTGPRGTLKQNLRHVDIEMK 47
>UniRef50_Q4P4X4 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 252
Score = 138 bits (335), Expect = 7e-32
Identities = 66/129 (51%), Positives = 83/129 (64%)
Frame = +1
Query: 211 WFGSKKELAAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFPINCVTTEGNSIIXIRNFLG 390
W +K A +RT + V NMIKGVT GFQY MRAVYAHFPIN + IRNFLG
Sbjct: 120 WHAGRKHAACLRTAQACVANMIKGVTVGFQYKMRAVYAHFPINIIIAGDKKSAEIRNFLG 179
Query: 391 XKYITRVKMAPGVTVVNSPKQKDELIIEGNSLEHVSSSAALIQQSTTVNNXDITKFLDGL 570
K + + M GVT+ QKD++++EGN ++ VS SAAL+ +T V N DI KFLDG+
Sbjct: 180 EKRVRNIAMLEGVTIQEDKAQKDQVLVEGNDIDLVSQSAALLHGATLVRNKDIRKFLDGI 239
Query: 571 YVSDKTTVV 597
Y + K TVV
Sbjct: 240 YCTGKDTVV 248
Score = 34.3 bits (75), Expect = 2.3
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +2
Query: 38 MKQIVANXKVKIPDGLTVHVKSRLVTVKGPRGVLKRN 148
M QI + +P ++V V SR+ TVKGPRG L ++
Sbjct: 1 MLQIFKELDLAVPADVSVSVSSRVFTVKGPRGSLTKS 37
>UniRef50_UPI00004985C5 Cluster: 60S ribosomal protein L9; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L9 - Entamoeba histolytica HM-1:IMSS
Length = 197
Score = 134 bits (325), Expect = 1e-30
Identities = 62/131 (47%), Positives = 86/131 (65%)
Frame = +1
Query: 202 VEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFPINCVTTEGNSIIXIRN 381
++ W+G++++ A VRT+ SH+ NMI GVTKG+QY MR VYAHFP+ V + I ++N
Sbjct: 65 IDMWYGNRRDSAVVRTIASHIKNMITGVTKGYQYKMRVVYAHFPVTLVIADDGKSIQVQN 124
Query: 382 FLGXKYITRVKMAPGVTVVNSPKQKDELIIEGNSLEHVSSSAALIQQSTTVNNXDITKFL 561
FLG K ++M GV V KDE+ +EGN +E VS SAA I + V N DI +FL
Sbjct: 125 FLGEKRTRHIEMYDGVVV--KKLGKDEICLEGNDVEKVSQSAANIHAANLVRNKDIRQFL 182
Query: 562 DGLYVSDKTTV 594
DG+YVS+K +
Sbjct: 183 DGVYVSEKCLI 193
Score = 38.7 bits (86), Expect = 0.11
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2
Query: 65 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI 172
V IP+G+ + + + + V GPRG L R F+H VDI
Sbjct: 11 VVIPEGVNIEINRKNIKVTGPRGSLTREFQHPKVDI 46
>UniRef50_P05738 Cluster: 60S ribosomal protein L9-A; n=40;
Eukaryota|Rep: 60S ribosomal protein L9-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 191
Score = 133 bits (322), Expect = 3e-30
Identities = 71/131 (54%), Positives = 87/131 (66%), Gaps = 2/131 (1%)
Frame = +1
Query: 199 KVEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFPINC--VTTEGNSIIX 372
KV G +K +AA+RTV S V NMI GVTKG++Y MR VYAHFPIN V +G I
Sbjct: 54 KVAVHNGGRKHVAALRTVKSLVDNMITGVTKGYKYKMRYVYAHFPINVNIVEKDGAKFIE 113
Query: 373 IRNFLGXKYITRVKMAPGVTVVNSPKQKDELIIEGNSLEHVSSSAALIQQSTTVNNXDIT 552
+RNFLG K I V + GVT+ S KDE+++ GNS+E VS +AA +QQ V N DI
Sbjct: 114 VRNFLGDKKIRNVPVRDGVTIEFSTNVKDEIVLSGNSVEDVSQNAADLQQICRVRNKDIR 173
Query: 553 KFLDGLYVSDK 585
KFLDG+YVS K
Sbjct: 174 KFLDGIYVSHK 184
Score = 54.4 bits (125), Expect = 2e-06
Identities = 23/49 (46%), Positives = 33/49 (67%)
Frame = +2
Query: 38 MKQIVANXKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVN 184
MK I ++++P+G+TV +KSR+V V GPRG L +N KH+ V VN
Sbjct: 1 MKYIQTEQQIEVPEGVTVSIKSRIVKVVGPRGTLTKNLKHIDVTFTKVN 49
>UniRef50_Q7QU08 Cluster: GLP_108_35846_36403; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_108_35846_36403 - Giardia lamblia
ATCC 50803
Length = 185
Score = 132 bits (319), Expect = 6e-30
Identities = 66/138 (47%), Positives = 83/138 (60%)
Frame = +1
Query: 172 SHGKPSLSCKVEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFPINCVTT 351
+H ++S V WF K A RT+CSH+ NM KGVT GF+Y MR YAHFPI
Sbjct: 45 THANDTISVAV--WFPRGKRNALPRTICSHIENMFKGVTYGFEYKMRLAYAHFPIAATVV 102
Query: 352 EGNSIIXIRNFLGXKYITRVKMAPGVTVVNSPKQKDELIIEGNSLEHVSSSAALIQQSTT 531
+ N I IRNF+ R++ PGVT+ S KDELI+ G S+E VS +AA I +S
Sbjct: 103 DNNKAIEIRNFMHQIKTRRIECLPGVTIAMSTNVKDELILRGISIEDVSHTAARIHESLK 162
Query: 532 VNNXDITKFLDGLYVSDK 585
V N D+ KFLDG YVS +
Sbjct: 163 VPNKDLRKFLDGCYVSSR 180
Score = 39.5 bits (88), Expect = 0.062
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = +2
Query: 47 IVANXKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVN 184
+ ++ +K+P + + R+VTVKG +G L R+F H +DI N
Sbjct: 3 LCSSMTIKVPTDVECTINKRVVTVKGKKGTLVRDFSHAPLDITHAN 48
>UniRef50_Q9AW64 Cluster: 60S ribosomal protein L9; n=1; Guillardia
theta|Rep: 60S ribosomal protein L9 - Guillardia theta
(Cryptomonas phi)
Length = 188
Score = 127 bits (306), Expect = 2e-28
Identities = 57/122 (46%), Positives = 80/122 (65%)
Frame = +1
Query: 211 WFGSKKELAAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFPINCVTTEGNSIIXIRNFLG 390
W KK+LA + T+ SH+ NMI GV+ GF+Y ++ +YAHFPIN T+ S + IRNFLG
Sbjct: 59 WMAGKKQLAKLNTIASHITNMIVGVSLGFEYILQPIYAHFPINLSITDDGSCLEIRNFLG 118
Query: 391 XKYITRVKMAPGVTVVNSPKQKDELIIEGNSLEHVSSSAALIQQSTTVNNXDITKFLDGL 570
K I ++ M GV + + +KDE+ + G+ L VS +AA IQQS N D+ KFLDG+
Sbjct: 119 EKRIRKIYMGQGVKIKKNEAKKDEISVFGSDLNLVSLNAASIQQSCQAKNKDLRKFLDGI 178
Query: 571 YV 576
Y+
Sbjct: 179 YI 180
>UniRef50_UPI0000DA3DDB Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=3; Euarchontoglires|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 145
Score = 116 bits (278), Expect = 6e-25
Identities = 65/123 (52%), Positives = 80/123 (65%)
Frame = +1
Query: 226 KELAAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFPINCVTTEGNSIIXIRNFLGXKYIT 405
KELA VRT+CSHV NMIKGV+ GF+Y +R+VYAHFP+N V
Sbjct: 30 KELATVRTICSHVQNMIKGVSLGFRYKVRSVYAHFPLNVV-------------------- 69
Query: 406 RVKMAPGVTVVNSPKQKDELIIEGNSLEHVSSSAALIQQSTTVNNXDITKFLDGLYVSDK 585
+M GV S QKDELI+EGN E VS+SAALIQ++T V N DI KF+DG+YVS+K
Sbjct: 70 --QMRTGVACSVSQAQKDELILEGNDTELVSNSAALIQKATAVENQDIRKFVDGIYVSEK 127
Query: 586 TTV 594
T+
Sbjct: 128 GTM 130
>UniRef50_A0DI71 Cluster: Chromosome undetermined scaffold_51, whole
genome shotgun sequence; n=6; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_51, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 196
Score = 114 bits (275), Expect = 1e-24
Identities = 56/129 (43%), Positives = 79/129 (61%), Gaps = 1/129 (0%)
Frame = +1
Query: 202 VEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFPINCVTTEGNSIIXIRN 381
V W +K+ V +V S + NMI+GVT G+++ M YAHFPI + I+N
Sbjct: 64 VRMWQSYRKQRCQVNSVASQIRNMIRGVTTGYKFKMVLAYAHFPIIINLIGNGQGVEIKN 123
Query: 382 FLGXKYITRVKMAPGVTVV-NSPKQKDELIIEGNSLEHVSSSAALIQQSTTVNNXDITKF 558
FLG K I +K PGVT+ N ++K+ L ++GN L +VS + ALI Q+ V N DI +F
Sbjct: 124 FLGEKIIRTIKCLPGVTITRNEAEEKNVLTLQGNDLNNVSLTCALIHQACAVKNKDIRQF 183
Query: 559 LDGLYVSDK 585
LDG+YVS+K
Sbjct: 184 LDGIYVSEK 192
Score = 50.0 bits (114), Expect = 4e-05
Identities = 22/47 (46%), Positives = 33/47 (70%)
Frame = +2
Query: 38 MKQIVANXKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM 178
MK I+ V IP+ + + KS++V VKGPRG L +NF+H A+DI++
Sbjct: 1 MKYILTEEHVPIPEKIEITQKSKVVKVKGPRGELTKNFRHSALDIQV 47
>UniRef50_O02376 Cluster: 60S ribosomal protein L9; n=1; Haemonchus
contortus|Rep: 60S ribosomal protein L9 - Haemonchus
contortus (Barber pole worm)
Length = 141
Score = 106 bits (254), Expect = 5e-22
Identities = 45/73 (61%), Positives = 56/73 (76%)
Frame = +1
Query: 199 KVEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFPINCVTTEGNSIIXIR 378
+V KWFG +KE+AA+RTVCSH+ NMIKGVTKGF+Y MR+VYAHFPIN +G + IR
Sbjct: 54 RVRKWFGVRKEIAAIRTVCSHIQNMIKGVTKGFRYKMRSVYAHFPINVTLQDGGRTVEIR 113
Query: 379 NFLGXKYITRVKM 417
NFLG K + V +
Sbjct: 114 NFLGEKIVRPVPL 126
Score = 54.4 bits (125), Expect = 2e-06
Identities = 26/57 (45%), Positives = 39/57 (68%)
Frame = +2
Query: 38 MKQIVANXKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRSPARLR 208
MK + +N V PDG+T VK+R+V V GPRG LKR+F+HL +++ V ++ R+R
Sbjct: 1 MKLVESNDTVDFPDGVTFTVKNRVVHVTGPRGTLKRDFRHLHMEMERVG-KNQLRVR 56
>UniRef50_Q8U015 Cluster: 50S ribosomal protein L6P; n=14;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Pyrococcus furiosus
Length = 184
Score = 104 bits (250), Expect = 1e-21
Identities = 55/128 (42%), Positives = 81/128 (63%)
Frame = +1
Query: 202 VEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFPINCVTTEGNSIIXIRN 381
+ K F +K++A RT +H+ NMIKGVT+GF Y ++ VY+HFPI+ V +G+ +I I N
Sbjct: 55 IYKDFPRRKDVAIARTFAAHIRNMIKGVTEGFTYKLKVVYSHFPIS-VKVQGDEVI-IEN 112
Query: 382 FLGXKYITRVKMAPGVTVVNSPKQKDELIIEGNSLEHVSSSAALIQQSTTVNNXDITKFL 561
FLG K + K+ PGVTV + E+I+EG E V +AA I+Q+T + D F
Sbjct: 113 FLGEKAPRKAKILPGVTV---KVRGQEIIVEGIDKEAVGQTAANIEQATRITKWDRRIFQ 169
Query: 562 DGLYVSDK 585
DG+Y+ +K
Sbjct: 170 DGIYIVEK 177
Score = 34.3 bits (75), Expect = 2.3
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = +2
Query: 62 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNF 151
+V+IP+G+ V V+ V VKGP+G L+R F
Sbjct: 10 EVEIPEGVEVTVEGYKVKVKGPKGELEREF 39
>UniRef50_Q5JJG4 Cluster: 50S ribosomal protein L6P; n=3;
Archaea|Rep: 50S ribosomal protein L6P - Pyrococcus
kodakaraensis (Thermococcus kodakaraensis)
Length = 184
Score = 104 bits (249), Expect = 2e-21
Identities = 55/128 (42%), Positives = 81/128 (63%)
Frame = +1
Query: 202 VEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFPINCVTTEGNSIIXIRN 381
+ K F KK++A VRT +H+ NMIKGVT+GF+Y ++ VY+HFP+ V +G+ ++ I N
Sbjct: 55 IYKEFPRKKDVAIVRTFKAHINNMIKGVTEGFKYRLKVVYSHFPMT-VKVQGDEVV-IEN 112
Query: 382 FLGXKYITRVKMAPGVTVVNSPKQKDELIIEGNSLEHVSSSAALIQQSTTVNNXDITKFL 561
FLG K R K+ PGVTV + E+ +EG E V +AA I+Q+T + D F
Sbjct: 113 FLGEKNPRRAKILPGVTV---KVKGSEIEVEGIDKEAVGQTAANIEQATRITKWDRRVFQ 169
Query: 562 DGLYVSDK 585
DG+Y+ +K
Sbjct: 170 DGIYIVEK 177
Score = 37.5 bits (83), Expect = 0.25
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +2
Query: 62 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI 172
+++IP+G+ V V+ V VKGP+G L+R K+ V I
Sbjct: 10 EIEIPEGVEVTVEGNTVKVKGPKGELQRELKYPGVQI 46
>UniRef50_Q8SSF7 Cluster: 60S RIBOSOMAL PROTEIN L9; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L9 -
Encephalitozoon cuniculi
Length = 204
Score = 103 bits (246), Expect = 4e-21
Identities = 53/129 (41%), Positives = 73/129 (56%)
Frame = +1
Query: 199 KVEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFPINCVTTEGNSIIXIR 378
++ W G +K +A TV S + N IK VT GF Y M+AVY HF IN E I+ ++
Sbjct: 73 RIRLWNGKRKAMALAITVESLLRNAIKAVTVGFAYTMKAVYNHFSINMEIKEDGKILLVK 132
Query: 379 NFLGXKYITRVKMAPGVTVVNSPKQKDELIIEGNSLEHVSSSAALIQQSTTVNNXDITKF 558
NFLG K + R +M G V ++KD ++IEG SL VS SA I N D F
Sbjct: 133 NFLGEKNVKRFRMR-GAARVRLDERKDTIVIEGPSLSDVSQSAGTITNECKAKNRDSRVF 191
Query: 559 LDGLYVSDK 585
LDG++V+++
Sbjct: 192 LDGIFVTER 200
>UniRef50_A2GN76 Cluster: Ribosomal protein L6, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein L6,
putative - Trichomonas vaginalis G3
Length = 197
Score = 96.3 bits (229), Expect = 5e-19
Identities = 52/123 (42%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
Frame = +1
Query: 211 WFGSKKELAAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFPINCVTTEGNSIIXIRNFLG 390
WFG++K LA + T+ V NMI GVT G++Y M VY+HFPI +E F+G
Sbjct: 66 WFGNRKLLARIGTLFGIVKNMITGVTLGWRYKMHFVYSHFPIKHTCSEDGRTFDFNGFMG 125
Query: 391 XKYITRVKMAPGVTV-VNSPKQKDELIIEGNSLEHVSSSAALIQQSTTVNNXDITKFLDG 567
K V GV + N KDE+ IEG +LE VS I Q T + + D+ KFLDG
Sbjct: 126 HKEHKIVTAPEGVRIWSNESVAKDEINIEGANLEDVSLVCGQIHQLTKIKDKDLRKFLDG 185
Query: 568 LYV 576
+YV
Sbjct: 186 IYV 188
>UniRef50_Q3LWE8 Cluster: Ribosomal protein L9; n=1; Bigelowiella
natans|Rep: Ribosomal protein L9 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 190
Score = 91.1 bits (216), Expect = 2e-17
Identities = 46/133 (34%), Positives = 73/133 (54%)
Frame = +1
Query: 187 SLSCKVEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFPINCVTTEGNSI 366
S S V ++ +K A VRT+ S + NMI GV+KGF Y ++ VY+HFPI+ + +
Sbjct: 52 SNSLIVRCYYNNKSSSAIVRTITSIIYNMIIGVSKGFTYLLKIVYSHFPISVKYIQNENT 111
Query: 367 IXIRNFLGXKYITRVKMAPGVTVVNSPKQKDELIIEGNSLEHVSSSAALIQQSTTVNNXD 546
+ I N G K I + V V + K E+I+ +E + ++LIQ ++NN D
Sbjct: 112 LEITNLFGLKRIDSFFIPSSVQVCTNNLNKKEIILLSKDIETLGILSSLIQNKCSINNKD 171
Query: 547 ITKFLDGLYVSDK 585
F+DG+Y++ K
Sbjct: 172 CRVFIDGIYLASK 184
>UniRef50_O28370 Cluster: 50S ribosomal protein L6P; n=4;
Euryarchaeota|Rep: 50S ribosomal protein L6P -
Archaeoglobus fulgidus
Length = 196
Score = 85.8 bits (203), Expect = 7e-16
Identities = 46/121 (38%), Positives = 68/121 (56%)
Frame = +1
Query: 223 KKELAAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFPINCVTTEGNSIIXIRNFLGXKYI 402
KK A V T H+ N+I GV +GF+Y ++ VYAHFPI V EGN +I I NF+G K+
Sbjct: 80 KKHKAMVGTFAGHIENLITGVKEGFEYHLKVVYAHFPIK-VRVEGNEVI-IENFIGEKHP 137
Query: 403 TRVKMAPGVTVVNSPKQKDELIIEGNSLEHVSSSAALIQQSTTVNNXDITKFLDGLYVSD 582
R K+ V S + ++ + G +E +AA ++Q+T + D F DG+Y+
Sbjct: 138 RRAKIVGRAQVEISGQ---DIYVRGIDIEECGQTAANLEQATKIKRKDPRVFQDGIYIVK 194
Query: 583 K 585
K
Sbjct: 195 K 195
>UniRef50_O05637 Cluster: 50S ribosomal protein L6P; n=8;
Thermoprotei|Rep: 50S ribosomal protein L6P - Sulfolobus
acidocaldarius
Length = 189
Score = 83.8 bits (198), Expect = 3e-15
Identities = 41/133 (30%), Positives = 77/133 (57%)
Frame = +1
Query: 202 VEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFPINCVTTEGNSIIXIRN 381
+E F +++ A + ++ +H+ NMI G G++Y ++ + HFPI+ V G+ + + N
Sbjct: 58 LETTFADRRKKALLYSIIAHIKNMITGTINGYRYYLKVISTHFPIS-VKVSGDE-VQVSN 115
Query: 382 FLGXKYITRVKMAPGVTVVNSPKQKDELIIEGNSLEHVSSSAALIQQSTTVNNXDITKFL 561
+G K I R K+ PGV V + +++++EG+ + +V+ +AA I+ ST + D F
Sbjct: 116 LIGEKNIRRAKILPGVKVT---VKGEDIVVEGSDIYNVAQTAANIESSTKIVGYDRRIFS 172
Query: 562 DGLYVSDKTTVVL 600
DG+Y+ K + L
Sbjct: 173 DGIYIYKKEVIGL 185
>UniRef50_A3CT13 Cluster: 50S ribosomal protein L6P; n=2;
Methanomicrobiales|Rep: 50S ribosomal protein L6P -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 174
Score = 83.4 bits (197), Expect = 4e-15
Identities = 47/121 (38%), Positives = 70/121 (57%)
Frame = +1
Query: 223 KKELAAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFPINCVTTEGNSIIXIRNFLGXKYI 402
K+ LA T+ +H NMI+GV G++Y M+ VY+HFPI + +GN + I NFLG K
Sbjct: 58 KRILAMTGTLEAHAKNMIRGVADGYEYRMKVVYSHFPIQ-LKQQGNR-LEITNFLGEKQP 115
Query: 403 TRVKMAPGVTVVNSPKQKDELIIEGNSLEHVSSSAALIQQSTTVNNXDITKFLDGLYVSD 582
K+ GVTV DE+ I G E V ++AA I+ +T + D F DG+Y+++
Sbjct: 116 RIAKIIEGVTVKIG---NDEVTITGIDKEKVGNTAANIEHATRITKRDPRVFQDGIYITE 172
Query: 583 K 585
+
Sbjct: 173 R 173
Score = 32.3 bits (70), Expect = 9.4
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +2
Query: 62 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDI 172
+V+IP G+ V + ++TV GP+G L R+ + +D+
Sbjct: 6 QVEIPPGVDVTLDGGVLTVSGPKGTLVRDMRFPQIDL 42
>UniRef50_P14135 Cluster: 50S ribosomal protein L6P; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L6P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 178
Score = 83.0 bits (196), Expect = 5e-15
Identities = 46/120 (38%), Positives = 70/120 (58%)
Frame = +1
Query: 226 KELAAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFPINCVTTEGNSIIXIRNFLGXKYIT 405
K ++ + T SH+ NM GVT+G++Y M Y+HFP+ V EG+ ++ I NFLG K
Sbjct: 58 KTMSTIGTFQSHIENMFHGVTEGWEYGMEVFYSHFPMQ-VNVEGDEVV-IENFLGEKAPR 115
Query: 406 RVKMAPGVTVVNSPKQKDELIIEGNSLEHVSSSAALIQQSTTVNNXDITKFLDGLYVSDK 585
R + G T V +EL + G +E V +AA I+Q T +N+ D+ F DG+Y++ K
Sbjct: 116 RTTI-HGDTDVEI--DGEELTVSGPDIEAVGQTAADIEQLTRINDKDVRVFQDGVYITRK 172
>UniRef50_UPI0000D9FBAF Cluster: PREDICTED: similar to 60S ribosomal
protein L9, partial; n=1; Macaca mulatta|Rep: PREDICTED:
similar to 60S ribosomal protein L9, partial - Macaca
mulatta
Length = 179
Score = 81.4 bits (192), Expect = 2e-14
Identities = 37/62 (59%), Positives = 42/62 (67%)
Frame = +1
Query: 202 VEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFPINCVTTEGNSIIXIRN 381
VE WFG K A +RTVCSH+ NMI GV + +QY +R VYAHFPIN T S I IRN
Sbjct: 118 VEMWFGLTKNKACIRTVCSHIENMITGVRQRYQYKLRFVYAHFPINSNITNDGSTIEIRN 177
Query: 382 FL 387
FL
Sbjct: 178 FL 179
Score = 41.5 bits (93), Expect = 0.015
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Frame = +2
Query: 38 MKQIVANXKVKIP-DGLTVHV--KSRLVTVKGPRGVLKRNFKHLAVDIRMV 181
MK I + ++IP DG TV V KSR + V G G L+R F+H+ VD+++V
Sbjct: 60 MKTIHSQIDIQIPEDGSTVKVTLKSRHIVVSGKYGKLERTFRHIPVDMKLV 110
>UniRef50_A0RVY9 Cluster: Ribosomal protein L6P/L9E; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein L6P/L9E -
Cenarchaeum symbiosum
Length = 165
Score = 81.4 bits (192), Expect = 2e-14
Identities = 45/121 (37%), Positives = 73/121 (60%)
Frame = +1
Query: 223 KKELAAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFPINCVTTEGNSIIXIRNFLGXKYI 402
K++LA + T S V N+ +GV G+ ++ VYAHFPI + +G ++I + NF G +
Sbjct: 46 KRDLAILNTARSIVRNLCEGVGVGYTIKLKVVYAHFPIT-IKQDG-AMILVENFQGERSA 103
Query: 403 TRVKMAPGVTVVNSPKQKDELIIEGNSLEHVSSSAALIQQSTTVNNXDITKFLDGLYVSD 582
+ K+ G VV+ + +++I+ G+ L VS +AA ++Q T V N D FLDG+YV +
Sbjct: 104 RKAKIVGGTKVVS---KGEDVIVTGHVLTDVSQTAANLEQGTKVKNKDHRVFLDGVYVYE 160
Query: 583 K 585
K
Sbjct: 161 K 161
>UniRef50_Q8PV34 Cluster: 50S ribosomal protein L6P; n=4;
Methanomicrobia|Rep: 50S ribosomal protein L6P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 176
Score = 78.6 bits (185), Expect = 1e-13
Identities = 47/121 (38%), Positives = 69/121 (57%)
Frame = +1
Query: 223 KKELAAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFPINCVTTEGNSIIXIRNFLGXKYI 402
K++ A V T SH+ N+I GV++GF+ M VYAHFP+ V EG +++ I NFLG K
Sbjct: 60 KEQKAMVGTFASHLKNLIIGVSEGFECKMNIVYAHFPMQ-VKVEGKTLV-IGNFLGEKK- 116
Query: 403 TRVKMAPGVTVVNSPKQKDELIIEGNSLEHVSSSAALIQQSTTVNNXDITKFLDGLYVSD 582
R+ G T V +E+++ G + E V +AA I+Q T + D F DG+Y+
Sbjct: 117 PRIAKILGETKVK--VSGNEIVVSGINKEDVGQTAANIEQKTKIKRFDPRIFQDGIYIVQ 174
Query: 583 K 585
K
Sbjct: 175 K 175
Score = 33.9 bits (74), Expect = 3.1
Identities = 12/38 (31%), Positives = 25/38 (65%)
Frame = +2
Query: 65 VKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRM 178
++IP+G++V + + T KGP+G ++R F + + I +
Sbjct: 9 IEIPEGVSVSLSQDVFTAKGPKGTVERTFWYPGIKIEV 46
>UniRef50_A1RXT3 Cluster: Ribosomal protein L6; n=2;
Thermoprotei|Rep: Ribosomal protein L6 - Thermofilum
pendens (strain Hrk 5)
Length = 191
Score = 77.4 bits (182), Expect = 3e-13
Identities = 46/112 (41%), Positives = 69/112 (61%)
Frame = +1
Query: 193 SCKVEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFPINCVTTEGNSIIX 372
S VE + +KK+ A V T+ S + NMI GVTKG++Y ++ VYAHFP++ + E + II
Sbjct: 52 SVVVETFHATKKDYALVGTIASIINNMIIGVTKGYRYKLKIVYAHFPMS-LKVEKDKII- 109
Query: 373 IRNFLGXKYITRVKMAPGVTVVNSPKQKDELIIEGNSLEHVSSSAALIQQST 528
I NFLG + + PG V +KD++I+EG L+ V+ +AA I +T
Sbjct: 110 IENFLGERGKRIAGIMPGAKV---KIEKDDVIVEGIDLDAVAQTAANIHLAT 158
Score = 37.5 bits (83), Expect = 0.25
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +2
Query: 38 MKQIVANXKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKH 157
M+ + V IP+G+ VHV + V V+GP G ++++F H
Sbjct: 1 MRVLQKTESVPIPEGVKVHVNGKRVEVEGPLGKVEKDFSH 40
>UniRef50_Q673R2 Cluster: 50S ribosomal protein L6P; n=2;
environmental samples|Rep: 50S ribosomal protein L6P -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 188
Score = 76.2 bits (179), Expect = 6e-13
Identities = 43/123 (34%), Positives = 65/123 (52%), Gaps = 2/123 (1%)
Frame = +1
Query: 223 KKELAAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFPINCVTTEGNSIIXIRNFLGXKYI 402
KKE A T +H+ NM +GV GF+Y ++AVY+HFP+ + GN + + N G K +
Sbjct: 62 KKEKALAGTWAAHLTNMARGVDSGFEYKLKAVYSHFPMT-IRVNGNQ-MTVTNLFGEK-V 118
Query: 403 TRVKMAP--GVTVVNSPKQKDELIIEGNSLEHVSSSAALIQQSTTVNNXDITKFLDGLYV 576
RV P V + K ++ + G E V +AA I++S + N D F DG+Y+
Sbjct: 119 PRVAALPWSPAEVEVKVQNKTDVTVSGADREKVGQTAANIERSCRIKNRDRRVFQDGIYI 178
Query: 577 SDK 585
K
Sbjct: 179 VSK 181
>UniRef50_Q97BW0 Cluster: 50S ribosomal protein L6P; n=1;
Thermoplasma volcanium|Rep: 50S ribosomal protein L6P -
Thermoplasma volcanium
Length = 178
Score = 74.5 bits (175), Expect = 2e-12
Identities = 44/129 (34%), Positives = 71/129 (55%)
Frame = +1
Query: 199 KVEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFPINCVTTEGNSIIXIR 378
K+ K + +E V T S + NM+KG+ +GFQY M+ Y+HFP+ V+ +G +++ I
Sbjct: 53 KIVKSKNNSRERGIVGTWASEISNMVKGLKEGFQYEMKIDYSHFPMR-VSVKGKTVV-IE 110
Query: 379 NFLGXKYITRVKMAPGVTVVNSPKQKDELIIEGNSLEHVSSSAALIQQSTTVNNXDITKF 558
NF G + R G T V+ + D L + G S + V +AA I+++T + D F
Sbjct: 111 NFFGER-SPRTAEIVGETQVS--VKGDRLFLNGPSKKDVGETAANIERATIIKGFDPRVF 167
Query: 559 LDGLYVSDK 585
DG+Y+ K
Sbjct: 168 QDGIYLISK 176
>UniRef50_Q74MR6 Cluster: 50S ribosomal protein L6P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L6P -
Nanoarchaeum equitans
Length = 192
Score = 71.3 bits (167), Expect = 2e-11
Identities = 42/130 (32%), Positives = 69/130 (53%), Gaps = 5/130 (3%)
Frame = +1
Query: 202 VEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFPINCVTTEGNSIIXIRN 381
+E +F +++E + T SH+ NM++GV F Y ++ Y HFP+ V EGN +I + N
Sbjct: 54 LETYFATRREKRLINTWRSHIKNMLEGVQNPFVYRLKVCYTHFPMR-VKLEGNKLI-VEN 111
Query: 382 FLGXK--YITRVKMAPGVTV-VNSPKQKDELIIEGNSLEHVSSSAALIQQSTTV--NNXD 546
FLG K I + V V + K + E+++E E A++I+QST D
Sbjct: 112 FLGEKAPIIKELPYLDKVKVKIEQNKDETEIVVESPDKEKAGIVASMIEQSTRFLHKRKD 171
Query: 547 ITKFLDGLYV 576
+F DG+++
Sbjct: 172 RRRFTDGIWL 181
>UniRef50_Q8ZVA7 Cluster: 50S ribosomal protein L6P; n=5;
Thermoproteaceae|Rep: 50S ribosomal protein L6P -
Pyrobaculum aerophilum
Length = 196
Score = 70.9 bits (166), Expect = 2e-11
Identities = 40/115 (34%), Positives = 67/115 (58%)
Frame = +1
Query: 202 VEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFPINCVTTEGNSIIXIRN 381
+E + K+E A + T + NM GVT+G++Y ++ +Y HFP+ V +GN ++ I N
Sbjct: 59 MEVFKARKREYAILGTYKGILKNMFLGVTRGWRYKLKVIYTHFPM-LVKVQGNQLV-IEN 116
Query: 382 FLGXKYITRVKMAPGVTVVNSPKQKDELIIEGNSLEHVSSSAALIQQSTTVNNXD 546
FLG K + + GV V K K++++IEG E VS+ AA +Q +T ++ +
Sbjct: 117 FLGRKSKITLNIPKGVKV--EVKGKEDIVIEGIDRELVSTFAAAVQAATELHGDE 169
>UniRef50_A7DSX9 Cluster: Ribosomal protein L6; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L6
- Candidatus Nitrosopumilus maritimus SCM1
Length = 185
Score = 68.9 bits (161), Expect = 9e-11
Identities = 41/121 (33%), Positives = 67/121 (55%)
Frame = +1
Query: 223 KKELAAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFPINCVTTEGNSIIXIRNFLGXKYI 402
K++ A + T S + N+ +G+ +G+ M+ V+AHFPI V EG I+ I NF G +
Sbjct: 64 KRDYAILHTARSIIRNICEGLVEGYTIKMKVVFAHFPIT-VKVEGKKIL-IENFQGERAP 121
Query: 403 TRVKMAPGVTVVNSPKQKDELIIEGNSLEHVSSSAALIQQSTTVNNXDITKFLDGLYVSD 582
+ V+ PK +D +++ G ++ +AA I+ +T V N D FLDG+YV +
Sbjct: 122 RSTHIMGNTKVI--PKGED-VLLTGEVWTDITQTAANIELTTKVKNKDHRVFLDGIYVYE 178
Query: 583 K 585
K
Sbjct: 179 K 179
Score = 33.5 bits (73), Expect = 4.1
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +2
Query: 62 KVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVN 184
+V+IP+G+TV ++ +GP G +NF+++ V I + +
Sbjct: 12 QVEIPEGVTVTQNKNMLLFEGPLGKTHKNFRNIPVKIEIAD 52
>UniRef50_Q8TW14 Cluster: 50S ribosomal protein L6P; n=3; cellular
organisms|Rep: 50S ribosomal protein L6P - Methanopyrus
kandleri
Length = 204
Score = 68.9 bits (161), Expect = 9e-11
Identities = 35/122 (28%), Positives = 66/122 (54%)
Frame = +1
Query: 220 SKKELAAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFPINCVTTEGNSIIXIRNFLGXKY 399
++++ A + + +++ NM KGVT+G +Y ++ VY+HFP + + I NF+G +
Sbjct: 78 NRRQKAILGMIKAYIENMQKGVTEGHEYKLKLVYSHFPPEVKVDQKEGKVYIENFMG-EN 136
Query: 400 ITRVKMAPGVTVVNSPKQKDELIIEGNSLEHVSSSAALIQQSTTVNNXDITKFLDGLYVS 579
+ RV Q ++I+ G E V +AA ++Q+T + + D F DG+Y+
Sbjct: 137 VPRVAEIVDPENTEVIVQGQDIIVRGIDKEAVGQTAANLEQATYIKDRDPRVFQDGIYIV 196
Query: 580 DK 585
+K
Sbjct: 197 EK 198
>UniRef50_Q6L1B1 Cluster: 50S ribosomal protein L6P; n=3;
Thermoplasmatales|Rep: 50S ribosomal protein L6P -
Picrophilus torridus
Length = 180
Score = 64.5 bits (150), Expect = 2e-09
Identities = 40/128 (31%), Positives = 65/128 (50%)
Frame = +1
Query: 193 SCKVEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFPINCVTTEGNSIIX 372
S K+ +K V T S +I+GVTKGF+Y M+ + HFP+ V+ G+ +I
Sbjct: 51 SVKIATSKNNKYTKGIVGTWYSETKLLIEGVTKGFEYHMKIDFTHFPMR-VSVRGDKLI- 108
Query: 373 IRNFLGXKYITRVKMAPGVTVVNSPKQKDELIIEGNSLEHVSSSAALIQQSTTVNNXDIT 552
+ NFLG K K+ G V + D + I G + +AA I+++T + + D
Sbjct: 109 VENFLGEKSPRSAKIVDGCKV---SVKGDRITINGIDKRKIGETAANIERATYIRHFDAR 165
Query: 553 KFLDGLYV 576
F DG+++
Sbjct: 166 VFQDGIFL 173
>UniRef50_Q5AEN3 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 140
Score = 58.0 bits (134), Expect = 2e-07
Identities = 41/112 (36%), Positives = 58/112 (51%), Gaps = 2/112 (1%)
Frame = -2
Query: 597 HNSCFVRYIKTIQELCDIXIVDCSRLLDESSRARDMFQGVAFND*FILLFGRVNDGHTRC 418
+N R I TIQE DI + D + LL+ SS R+ FQGV N+ FILL R G T
Sbjct: 21 NNGTSFRNINTIQEFTDILVSDTTDLLNISSILRNSFQGVTRNNQFILLSRRNFHGDTFM 80
Query: 417 HLYPCDVFXPQEVTYXNN*ITL--SGDTVNGEVSIHSTHXVLEAFSYSFNHV 268
+ F QE++ N +T+ + VN E+ I+ +H V FS + + V
Sbjct: 81 DFNFSNSFFTQEISNFNVILTIFFNNVNVNWEMRINKSHLVFVTFSDTSDQV 132
>UniRef50_UPI0000DA368E Cluster: PREDICTED: similar to 60S ribosomal
protein L9; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L9 - Rattus norvegicus
Length = 92
Score = 52.8 bits (121), Expect = 6e-06
Identities = 26/59 (44%), Positives = 35/59 (59%)
Frame = +1
Query: 292 GFQYXMRAVYAHFPINCVTTEGNSIIXIRNFLGXKYITRVKMAPGVTVVNSPKQKDELI 468
GF Y MR+VYA FP N + E S+I + +G KYI RV++ V S QK+EL+
Sbjct: 33 GFHYRMRSVYAGFPTNVIIQENGSVIEHWSAMGKKYIHRVQIRTSVAFYASQAQKNELM 91
>UniRef50_UPI0001554F35 Cluster: PREDICTED: similar to Chain A,
Solution Structure Of The N-Terminal Domain Of Human
Ribosomal Protein L9; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to Chain A, Solution Structure Of The
N-Terminal Domain Of Human Ribosomal Protein L9 -
Ornithorhynchus anatinus
Length = 143
Score = 46.4 bits (105), Expect = 5e-04
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +2
Query: 38 MKQIVANXKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPR 190
MK I++N V IP + + +K R V VKGP+G L R+F H+ V++ ++ +
Sbjct: 1 MKTILSNQTVDIPANIGIILKGRTVIVKGPQGSLHRDFNHINVELSLLGKK 51
Score = 46.0 bits (104), Expect = 7e-04
Identities = 21/39 (53%), Positives = 26/39 (66%)
Frame = +1
Query: 178 GKPSLSCKVEKWFGSKKELAAVRTVCSHVXNMIKGVTKG 294
GK V+KW+G++KELA V T+CS V N IK VT G
Sbjct: 49 GKKLKKFHVDKWWGNRKELATVHTICSPVQNTIKWVTLG 87
>UniRef50_Q48D51 Cluster: 50S ribosomal protein L6; n=6;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Pseudomonas syringae pv. phaseolicola (strain 1448A /
Race 6)
Length = 179
Score = 40.3 bits (90), Expect = 0.036
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Frame = +2
Query: 50 VANXKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRSPARL--RNGSDP 223
VA VK+P G+ V + +L++VKGP+G L+ H +V++ +V R RNG
Sbjct: 4 VAKNPVKLPSGVEVKLVGQLLSVKGPKGTLEL-IIHSSVEVEIVEEAGELRFAARNGDQQ 62
Query: 224 KRSL 235
R++
Sbjct: 63 TRAM 66
>UniRef50_Q6E6D2 Cluster: Large subunit ribosomal protein L9e; n=1;
Antonospora locustae|Rep: Large subunit ribosomal
protein L9e - Antonospora locustae (Nosema locustae)
Length = 160
Score = 39.1 bits (87), Expect = 0.082
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = +2
Query: 38 MKQIVANXKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAV 166
MK+++ KV+IP+G +V + R++TV+G R R+ H +
Sbjct: 1 MKRLLCEEKVEIPEGCSVEILERVMTVRGKRATAVRDLSHFVL 43
>UniRef50_Q3ZZN4 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Dehalococcoides
sp. (strain CBDB1)
Length = 182
Score = 37.9 bits (84), Expect = 0.19
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +2
Query: 50 VANXKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFK 154
+ +K+P G+ V + VTVKGP+G L R+F+
Sbjct: 4 IGKMPIKVPPGIKVDINGNDVTVKGPKGTLSRSFR 38
>UniRef50_A0BWM5 Cluster: Chromosome undetermined scaffold_132,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_132,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 167
Score = 37.1 bits (82), Expect = 0.33
Identities = 13/25 (52%), Positives = 21/25 (84%)
Frame = +2
Query: 104 RLVTVKGPRGVLKRNFKHLAVDIRM 178
+L+ + GPRG+L RNFKH ++DI++
Sbjct: 53 KLIMIIGPRGILNRNFKHASLDIQV 77
>UniRef50_Q9ZAE4 Cluster: 50S ribosomal protein L6; n=4; cellular
organisms|Rep: 50S ribosomal protein L6 - Thermotoga
maritima
Length = 184
Score = 36.3 bits (80), Expect = 0.58
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 50 VANXKVKIPDGLTVHVKSRLVTVKGPRGVLKRNF 151
+A + +P G+TV +K +V VKGP+G L + F
Sbjct: 4 LAKKPIVLPQGVTVEIKDNVVKVKGPKGELSQEF 37
>UniRef50_UPI0000499CA8 Cluster: BspA-like leucine rich repeat
protein; n=1; Entamoeba histolytica HM-1:IMSS|Rep:
BspA-like leucine rich repeat protein - Entamoeba
histolytica HM-1:IMSS
Length = 651
Score = 35.5 bits (78), Expect = 1.0
Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 5 FPGSCVKQSPNMKQIVANXKVK-IPDGLTVHVKSRLVTVKGPRGV 136
F C KQ N+K I K+K IPDG S L+TVK P+GV
Sbjct: 591 FSTDCFKQCTNLKSIAIPLKLKEIPDGCFAGCSS-LITVKIPKGV 634
>UniRef50_Q8R7W9 Cluster: 50S ribosomal protein L6; n=22;
Bacteria|Rep: 50S ribosomal protein L6 -
Thermoanaerobacter tengcongensis
Length = 180
Score = 35.5 bits (78), Expect = 1.0
Identities = 25/100 (25%), Positives = 48/100 (48%)
Frame = +1
Query: 223 KKELAAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFPINCVTTEGNSIIXIRNFLGXKYI 402
K+E A T + + NM+KGVT+GF+ + V + +G +I +G +
Sbjct: 60 KEERAMHGTTRAIIANMVKGVTEGFEKALEIVGVGYR---AAKQGKKLIL---NVGYSHP 113
Query: 403 TRVKMAPGVTVVNSPKQKDELIIEGNSLEHVSSSAALIQQ 522
++ PG+ ++ + + +I+ G E V AA I++
Sbjct: 114 VEIEEEPGIEII--VEGNNRIIVRGADKERVGQVAANIRR 151
>UniRef50_Q7UN05 Cluster: 50S ribosomal protein L6; n=3;
Planctomycetaceae|Rep: 50S ribosomal protein L6 -
Rhodopirellula baltica
Length = 181
Score = 35.5 bits (78), Expect = 1.0
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = +2
Query: 50 VANXKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKH 157
+ N V IP G+TV + R + V+GP+G K +FKH
Sbjct: 4 IGNKPVAIPSGVTVSIADRNIDVEGPKG--KLSFKH 37
>UniRef50_A4M9T7 Cluster: 50S ribosomal protein L6; n=3;
Thermotogaceae|Rep: 50S ribosomal protein L6 - Petrotoga
mobilis SJ95
Length = 186
Score = 33.9 bits (74), Expect = 3.1
Identities = 18/34 (52%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = +1
Query: 202 VEKWFGSKKELAAVR-TVCSHVXNMIKGVTKGFQ 300
V K +K L A+R T SHV NMIKGVT+G++
Sbjct: 60 VVKRSSDEKRLKALRGTFTSHVRNMIKGVTEGYK 93
>UniRef50_Q11HR7 Cluster: 50S ribosomal protein L6; n=73;
Proteobacteria|Rep: 50S ribosomal protein L6 -
Mesorhizobium sp. (strain BNC1)
Length = 177
Score = 33.9 bits (74), Expect = 3.1
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 50 VANXKVKIPDGLTVHVKSRLVTVKGPRGVLK 142
+ V +P G+T +V ++VT KGP+G LK
Sbjct: 4 IGKKPVPVPQGVTANVDGQVVTAKGPKGELK 34
>UniRef50_Q83ER1 Cluster: 50S ribosomal protein L6; n=108;
Proteobacteria|Rep: 50S ribosomal protein L6 - Coxiella
burnetii
Length = 178
Score = 33.9 bits (74), Expect = 3.1
Identities = 21/62 (33%), Positives = 29/62 (46%)
Frame = +2
Query: 50 VANXKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRSPARLRNGSDPKR 229
VA +KIP G+ V+V + +TVKG G L R H AV + + N S
Sbjct: 5 VAKNPIKIPTGVEVNVAGQQITVKGKLGTLTRVI-HRAVKVTKTDAELQTICANDSPGSN 63
Query: 230 SL 235
+L
Sbjct: 64 AL 65
Score = 32.3 bits (70), Expect = 9.4
Identities = 27/96 (28%), Positives = 46/96 (47%)
Frame = +1
Query: 235 AAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFPINCVTTEGNSIIXIRNFLGXKYITRVK 414
A T + + NM++GV GFQ + V + EG + +G + ++
Sbjct: 64 ALAGTARAVLANMVQGVHTGFQRKLVMVGVGYR---AKAEGKK---LNLTVGLSHPVNIE 117
Query: 415 MAPGVTVVNSPKQKDELIIEGNSLEHVSSSAALIQQ 522
M G+T V +P Q E+I++G + VS AA I++
Sbjct: 118 MPEGIT-VETPSQ-TEIIVKGADKQRVSQVAANIRE 151
>UniRef50_Q8A491 Cluster: 50S ribosomal protein L6; n=34;
Bacteria|Rep: 50S ribosomal protein L6 - Bacteroides
thetaiotaomicron
Length = 189
Score = 33.9 bits (74), Expect = 3.1
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 50 VANXKVKIPDGLTVHVKSRLVTVKGPRGVLKR 145
+ + IP G+TV +K +VTVKGP+G L +
Sbjct: 4 IGKLPISIPAGVTVTLKDDVVTVKGPKGELSQ 35
>UniRef50_Q6YR07 Cluster: 50S ribosomal protein L6; n=16;
Firmicutes|Rep: 50S ribosomal protein L6 - Onion yellows
phytoplasma
Length = 184
Score = 33.5 bits (73), Expect = 4.1
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +2
Query: 50 VANXKVKIPDGLTVHVKSR-LVTVKGPRGVLKRNFKH 157
V N +++P+ + V +K R ++V+GP+G L+ F H
Sbjct: 4 VGNKAIEVPNAVKVDIKDRNFISVEGPKGKLEYQFNH 40
>UniRef50_Q5ZYR8 Cluster: Long chain acyl-CoA dehydrogenase; n=4;
Legionella pneumophila|Rep: Long chain acyl-CoA
dehydrogenase - Legionella pneumophila subsp.
pneumophila (strain Philadelphia 1 /ATCC 33152 / DSM
7513)
Length = 812
Score = 33.1 bits (72), Expect = 5.4
Identities = 22/78 (28%), Positives = 41/78 (52%)
Frame = +1
Query: 154 TLGC*HSHGKPSLSCKVEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFP 333
T+ + H KPS++ + K+F + ELA + S + + + G + + ++Y P
Sbjct: 435 TVAAVNEHKKPSVASAITKYFNT--ELARITVNASMDVHAGRAIVVGPRNYLNSLYQSVP 492
Query: 334 INCVTTEGNSIIXIRNFL 387
I+ +T EG +I+ RN L
Sbjct: 493 IS-ITVEGANIMS-RNLL 508
>UniRef50_A5GIT1 Cluster: 50S ribosomal protein L6; n=7;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain WH7803)
Length = 179
Score = 33.1 bits (72), Expect = 5.4
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 50 VANXKVKIPDGLTVHVKSRLVTVKGPRGVLKR 145
+ + IPD ++V + VTVKGP+G LKR
Sbjct: 4 IGKSPIPIPDKVSVSLDGLAVTVKGPKGELKR 35
>UniRef50_UPI000049A544 Cluster: DNA-directed RNA polymerase III
largest subunit; n=1; Entamoeba histolytica
HM-1:IMSS|Rep: DNA-directed RNA polymerase III largest
subunit - Entamoeba histolytica HM-1:IMSS
Length = 1379
Score = 32.3 bits (70), Expect = 9.4
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 424 GVTVVNSPKQKDELIIEGNSLEHVSSSAALIQQSTTVNNXDITKFLDGLYVSDKTTV 594
G V+N K EL++EG+ L V + +I + TT N+ + + + G+ + T +
Sbjct: 1211 GRAVINKNKGSFELLVEGSELLKVMGTPGVIGEETTSNHIAVVEKVLGIEAARSTII 1267
>UniRef50_Q8XPL8 Cluster: Putative surface-exposed adhesin protein;
n=1; Ralstonia solanacearum|Rep: Putative
surface-exposed adhesin protein - Ralstonia solanacearum
(Pseudomonas solanacearum)
Length = 1309
Score = 32.3 bits (70), Expect = 9.4
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +1
Query: 478 NSLEHVSSSAALIQQSTTVNNXDITKFLDG 567
NS++ +SSSA+L+QQS + + K LDG
Sbjct: 150 NSIKSISSSASLVQQSAAGKDITVAKDLDG 179
>UniRef50_Q847P4 Cluster: 50S ribosomal protein L6; n=1; Aster
yellows phytoplasma|Rep: 50S ribosomal protein L6 -
Aster yellows phytoplasma
Length = 175
Score = 32.3 bits (70), Expect = 9.4
Identities = 19/86 (22%), Positives = 41/86 (47%)
Frame = +1
Query: 262 VXNMIKGVTKGFQYXMRAVYAHFPINCVTTEGNSIIXIRNFLGXKYITRVKMAPGVTVVN 441
+ NMIKGV+ GF+ + + F N + N I+ + +G + +K+ +T+
Sbjct: 80 IYNMIKGVSNGFKKKLELIGVGFRAN-INNNNNQILNLN--IGYSHNIMIKLPQSITLEV 136
Query: 442 SPKQKDELIIEGNSLEHVSSSAALIQ 519
+ ++I++ + + AA I+
Sbjct: 137 KMDKNPQIILKSYDKQLLGIVAAKIR 162
>UniRef50_Q0ID19 Cluster: 50S ribosomal protein L6; n=6;
Bacteria|Rep: 50S ribosomal protein L6 - Synechococcus
sp. (strain CC9311)
Length = 179
Score = 32.3 bits (70), Expect = 9.4
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +2
Query: 50 VANXKVKIPDGLTVHVKSRLVTVKGPRGVLKR 145
+ + IPD + V + VTVKGP+G LKR
Sbjct: 4 IGKNPIPIPDKVNVTLSGLAVTVKGPKGELKR 35
>UniRef50_Q8ETW8 Cluster: 50S ribosomal protein L6; n=40;
Bacteria|Rep: 50S ribosomal protein L6 - Oceanobacillus
iheyensis
Length = 178
Score = 32.3 bits (70), Expect = 9.4
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +2
Query: 65 VKIPDGLTVHVKSRLVTVKGPRGVLKR 145
V+IP+G+ + + + VTVKGP+G L R
Sbjct: 9 VEIPEGVELKLDNNTVTVKGPKGELSR 35
>UniRef50_Q5FM76 Cluster: 50S ribosomal protein L6; n=10;
Firmicutes|Rep: 50S ribosomal protein L6 - Lactobacillus
acidophilus
Length = 176
Score = 32.3 bits (70), Expect = 9.4
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2
Query: 65 VKIPDGLTVHVKSRLVTVKGPRGVLKRNF 151
+++PD +TV + +TVKGP+G L R F
Sbjct: 9 IEVPDSVTVTKEGDNITVKGPKGELTRYF 37
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 594,314,783
Number of Sequences: 1657284
Number of extensions: 11366422
Number of successful extensions: 26245
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 25539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26229
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44392209541
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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