Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_E13
         (616 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           24   3.4  
Y17703-1|CAA76823.1|  111|Anopheles gambiae D7r1 protein protein.      23   5.9  
AY045760-1|AAK84942.1|  165|Anopheles gambiae D7-related 1 prote...    23   5.9  
AJ133852-1|CAB39727.1|  165|Anopheles gambiae D7-related 1 prote...    23   5.9  

>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 272 MXSTCEQTVLTAASSFLDPN 213
           M S CE+T+    SSF DP+
Sbjct: 327 MISACEKTMQRMTSSFPDPH 346


>Y17703-1|CAA76823.1|  111|Anopheles gambiae D7r1 protein protein.
          Length = 111

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 10/38 (26%), Positives = 21/38 (55%)
 Frame = -3

Query: 563 SKNFVISLLLTVVDCWMRAAELETCSKELPSMINSSFC 450
           +K  ++SLL   +    +A  ++ C K++P+ + S  C
Sbjct: 3   NKLHLVSLLACGLFVIAQANTVKKCEKKMPASLKSQLC 40


>AY045760-1|AAK84942.1|  165|Anopheles gambiae D7-related 1 protein
           protein.
          Length = 165

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 10/38 (26%), Positives = 21/38 (55%)
 Frame = -3

Query: 563 SKNFVISLLLTVVDCWMRAAELETCSKELPSMINSSFC 450
           +K  ++SLL   +    +A  ++ C K++P+ + S  C
Sbjct: 3   NKLHLVSLLACGLFVIAQANTVKKCEKKMPASLKSQLC 40


>AJ133852-1|CAB39727.1|  165|Anopheles gambiae D7-related 1 protein
           protein.
          Length = 165

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 10/38 (26%), Positives = 21/38 (55%)
 Frame = -3

Query: 563 SKNFVISLLLTVVDCWMRAAELETCSKELPSMINSSFC 450
           +K  ++SLL   +    +A  ++ C K++P+ + S  C
Sbjct: 3   NKLHLVSLLACGLFVIAQANTVKKCEKKMPASLKSQLC 40


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 630,545
Number of Sequences: 2352
Number of extensions: 13280
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)