Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_E13
(616 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X94613-1|CAA64319.1| 190|Drosophila melanogaster ribosomal prot... 229 2e-60
BT022718-1|AAY55134.1| 190|Drosophila melanogaster RE74350p pro... 229 2e-60
AE014134-2010|AAF53049.1| 190|Drosophila melanogaster CG6141-PB... 229 2e-60
AE014134-2009|AAF53048.2| 190|Drosophila melanogaster CG6141-PA... 229 2e-60
BT011112-1|AAR82779.1| 2851|Drosophila melanogaster LD31436p pro... 30 2.9
AF425651-1|AAL65911.1| 4001|Drosophila melanogaster multiple ank... 30 2.9
AE014297-3507|AAO41601.1| 4001|Drosophila melanogaster CG33106-P... 30 2.9
AE014297-3506|AAO41600.1| 4001|Drosophila melanogaster CG33106-P... 30 2.9
AE014297-2734|AAF55720.1| 573|Drosophila melanogaster CG4462-PA... 29 6.6
>X94613-1|CAA64319.1| 190|Drosophila melanogaster ribosomal protein
L9 protein.
Length = 190
Score = 229 bits (561), Expect = 2e-60
Identities = 109/133 (81%), Positives = 118/133 (88%)
Frame = +1
Query: 199 KVEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFPINCVTTEGNSIIXIR 378
KVEKWFG+KKELAAVRTVCSH+ NMIKGVT GFQY MRAVYAHFPINCVT+E N++I IR
Sbjct: 54 KVEKWFGTKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIR 113
Query: 379 NFLGXKYITRVKMAPGVTVVNSPKQKDELIIEGNSLEHVSSSAALIQQSTTVNNXDITKF 558
NFLG KYI RV+MAPGVTVVNS QKDELI+EGN +E VS SAALIQQSTTV N DI KF
Sbjct: 114 NFLGEKYIRRVEMAPGVTVVNSTAQKDELIVEGNDIESVSGSAALIQQSTTVKNKDIRKF 173
Query: 559 LDGLYVSDKTTVV 597
LDGLYVS+KTTVV
Sbjct: 174 LDGLYVSEKTTVV 186
Score = 55.2 bits (127), Expect = 7e-08
Identities = 26/52 (50%), Positives = 36/52 (69%)
Frame = +2
Query: 38 MKQIVANXKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRS 193
M+ I +N VKIP + VK+R+VT+ G RG LKR FKHLA+D+ M + R+
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRTFKHLALDMYMPDKRT 52
>BT022718-1|AAY55134.1| 190|Drosophila melanogaster RE74350p
protein.
Length = 190
Score = 229 bits (561), Expect = 2e-60
Identities = 109/133 (81%), Positives = 118/133 (88%)
Frame = +1
Query: 199 KVEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFPINCVTTEGNSIIXIR 378
KVEKWFG+KKELAAVRTVCSH+ NMIKGVT GFQY MRAVYAHFPINCVT+E N++I IR
Sbjct: 54 KVEKWFGTKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIR 113
Query: 379 NFLGXKYITRVKMAPGVTVVNSPKQKDELIIEGNSLEHVSSSAALIQQSTTVNNXDITKF 558
NFLG KYI RV+MAPGVTVVNS QKDELI+EGN +E VS SAALIQQSTTV N DI KF
Sbjct: 114 NFLGEKYIRRVEMAPGVTVVNSTAQKDELIVEGNDIESVSGSAALIQQSTTVKNKDIRKF 173
Query: 559 LDGLYVSDKTTVV 597
LDGLYVS+KTTVV
Sbjct: 174 LDGLYVSEKTTVV 186
Score = 55.6 bits (128), Expect = 5e-08
Identities = 26/52 (50%), Positives = 37/52 (71%)
Frame = +2
Query: 38 MKQIVANXKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRS 193
M+ I +N VKIP + VK+R+VT+ G RG LKR+FKHLA+D+ M + R+
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRT 52
>AE014134-2010|AAF53049.1| 190|Drosophila melanogaster CG6141-PB,
isoform B protein.
Length = 190
Score = 229 bits (561), Expect = 2e-60
Identities = 109/133 (81%), Positives = 118/133 (88%)
Frame = +1
Query: 199 KVEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFPINCVTTEGNSIIXIR 378
KVEKWFG+KKELAAVRTVCSH+ NMIKGVT GFQY MRAVYAHFPINCVT+E N++I IR
Sbjct: 54 KVEKWFGTKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIR 113
Query: 379 NFLGXKYITRVKMAPGVTVVNSPKQKDELIIEGNSLEHVSSSAALIQQSTTVNNXDITKF 558
NFLG KYI RV+MAPGVTVVNS QKDELI+EGN +E VS SAALIQQSTTV N DI KF
Sbjct: 114 NFLGEKYIRRVEMAPGVTVVNSTAQKDELIVEGNDIESVSGSAALIQQSTTVKNKDIRKF 173
Query: 559 LDGLYVSDKTTVV 597
LDGLYVS+KTTVV
Sbjct: 174 LDGLYVSEKTTVV 186
Score = 55.6 bits (128), Expect = 5e-08
Identities = 26/52 (50%), Positives = 37/52 (71%)
Frame = +2
Query: 38 MKQIVANXKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRS 193
M+ I +N VKIP + VK+R+VT+ G RG LKR+FKHLA+D+ M + R+
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRT 52
>AE014134-2009|AAF53048.2| 190|Drosophila melanogaster CG6141-PA,
isoform A protein.
Length = 190
Score = 229 bits (561), Expect = 2e-60
Identities = 109/133 (81%), Positives = 118/133 (88%)
Frame = +1
Query: 199 KVEKWFGSKKELAAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFPINCVTTEGNSIIXIR 378
KVEKWFG+KKELAAVRTVCSH+ NMIKGVT GFQY MRAVYAHFPINCVT+E N++I IR
Sbjct: 54 KVEKWFGTKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIR 113
Query: 379 NFLGXKYITRVKMAPGVTVVNSPKQKDELIIEGNSLEHVSSSAALIQQSTTVNNXDITKF 558
NFLG KYI RV+MAPGVTVVNS QKDELI+EGN +E VS SAALIQQSTTV N DI KF
Sbjct: 114 NFLGEKYIRRVEMAPGVTVVNSTAQKDELIVEGNDIESVSGSAALIQQSTTVKNKDIRKF 173
Query: 559 LDGLYVSDKTTVV 597
LDGLYVS+KTTVV
Sbjct: 174 LDGLYVSEKTTVV 186
Score = 55.6 bits (128), Expect = 5e-08
Identities = 26/52 (50%), Positives = 37/52 (71%)
Frame = +2
Query: 38 MKQIVANXKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRS 193
M+ I +N VKIP + VK+R+VT+ G RG LKR+FKHLA+D+ M + R+
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRT 52
>BT011112-1|AAR82779.1| 2851|Drosophila melanogaster LD31436p protein.
Length = 2851
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -3
Query: 497 ETCSKELPSMINSSFCLGELTTVTPGA 417
E+ SK LP+ SS LG+ +TV+PGA
Sbjct: 2688 ESSSKSLPAAQKSSTTLGKSSTVSPGA 2714
>AF425651-1|AAL65911.1| 4001|Drosophila melanogaster multiple ankyrin
repeat singleKH domain protein protein.
Length = 4001
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -3
Query: 497 ETCSKELPSMINSSFCLGELTTVTPGA 417
E+ SK LP+ SS LG+ +TV+PGA
Sbjct: 3252 ESSSKSLPAAQKSSTTLGKSSTVSPGA 3278
>AE014297-3507|AAO41601.1| 4001|Drosophila melanogaster CG33106-PB,
isoform B protein.
Length = 4001
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -3
Query: 497 ETCSKELPSMINSSFCLGELTTVTPGA 417
E+ SK LP+ SS LG+ +TV+PGA
Sbjct: 3252 ESSSKSLPAAQKSSTTLGKSSTVSPGA 3278
>AE014297-3506|AAO41600.1| 4001|Drosophila melanogaster CG33106-PA,
isoform A protein.
Length = 4001
Score = 29.9 bits (64), Expect = 2.9
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -3
Query: 497 ETCSKELPSMINSSFCLGELTTVTPGA 417
E+ SK LP+ SS LG+ +TV+PGA
Sbjct: 3252 ESSSKSLPAAQKSSTTLGKSSTVSPGA 3278
>AE014297-2734|AAF55720.1| 573|Drosophila melanogaster CG4462-PA
protein.
Length = 573
Score = 28.7 bits (61), Expect = 6.6
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Frame = -3
Query: 263 TCEQTVLTAAS--SF-LDPNHFSTLQESEGLPCECQQPSV*SSF 141
TC+ + LT++S SF + N L ES G EC+Q + SSF
Sbjct: 89 TCDTSYLTSSSNSSFSISDNQCYVLDESTGTSSECEQFNYVSSF 132
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,189,019
Number of Sequences: 53049
Number of extensions: 551167
Number of successful extensions: 1208
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1208
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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