Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_E13
         (616 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    26   0.34 
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   4.1  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   4.1  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       21   9.6  

>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 25.8 bits (54), Expect = 0.34
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = -2

Query: 249 CPHGGKLLFGSEPFLNLAGERGFTMR 172
           CP    +LF S PFLN  G  G T R
Sbjct: 383 CPESDSILFVSSPFLN--GLEGLTGR 406


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = +1

Query: 271 MIKGVTKGFQYXMRAVYAH 327
           M++G+  G QY     Y H
Sbjct: 740 MLRGIASGMQYLAEMNYVH 758


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 55  KSXSQNPRRAYGPCEIAS 108
           KS S +PR   GPC+  S
Sbjct: 880 KSPSPSPRPLVGPCKALS 897


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 10/27 (37%), Positives = 12/27 (44%)
 Frame = -2

Query: 552 CDIXIVDCSRLLDESSRARDMFQGVAF 472
           C I +    RLLD   + R  F  V F
Sbjct: 324 CHILVATPGRLLDFVEKGRVKFSSVQF 350


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,722
Number of Sequences: 438
Number of extensions: 3056
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)