Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_E12
(649 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q921J9 Cluster: Rabggta protein; n=5; Euteleostomi|Rep:... 77 4e-13
UniRef50_Q92696 Cluster: Geranylgeranyl transferase type-2 subun... 77 4e-13
UniRef50_Q9VN77 Cluster: CG12007-PA; n=2; Sophophora|Rep: CG1200... 75 1e-12
UniRef50_Q17NP5 Cluster: Rab geranylgeranyl transferase alpha su... 75 1e-12
UniRef50_UPI0000D561D5 Cluster: PREDICTED: similar to Rab gerany... 71 2e-11
UniRef50_Q9TYY0 Cluster: Putative uncharacterized protein M57.2;... 71 3e-11
UniRef50_Q5BZ45 Cluster: SJCHGC04459 protein; n=1; Schistosoma j... 64 3e-09
UniRef50_A7SL75 Cluster: Predicted protein; n=1; Nematostella ve... 52 9e-06
UniRef50_O94412 Cluster: Rab geranylgeranyltransferase; n=1; Sch... 51 2e-05
UniRef50_Q6C601 Cluster: Yarrowia lipolytica chromosome E of str... 50 6e-05
UniRef50_O93829 Cluster: Geranylgeranyl transferase type-2 subun... 49 8e-05
UniRef50_Q55DQ4 Cluster: Putative uncharacterized protein; n=1; ... 46 6e-04
UniRef50_Q5CIB7 Cluster: Rab geranylgeranyltransferase, alpha su... 46 0.001
UniRef50_A5K3Y5 Cluster: Protein prenyltransferase alpha subunit... 45 0.002
UniRef50_A6QWC8 Cluster: Putative uncharacterized protein; n=1; ... 42 0.013
UniRef50_Q8IL46 Cluster: Protein prenyltransferase alpha subunit... 41 0.030
UniRef50_Q4P3U2 Cluster: Putative uncharacterized protein; n=1; ... 40 0.069
UniRef50_Q5K762 Cluster: RAB-protein geranylgeranyltransferase, ... 38 0.16
UniRef50_A1CWQ9 Cluster: Protein prenyltransferase alpha subunit... 38 0.16
UniRef50_Q00618 Cluster: Geranylgeranyl transferase type-2 subun... 37 0.48
UniRef50_UPI000065D014 Cluster: Protein prenyltransferase alpha ... 36 0.64
UniRef50_Q08CA2 Cluster: LOC561820 protein; n=9; Euteleostomi|Re... 35 1.5
UniRef50_Q4YXA5 Cluster: Protein prenyltransferase alpha subunit... 35 1.5
UniRef50_Q96U26 Cluster: Related to geranylgeranyl transferase a... 35 2.0
UniRef50_UPI00004999D2 Cluster: conserved hypothetical protein; ... 34 2.6
UniRef50_Q8RA32 Cluster: DNA polymerase III polC-type; n=7; Clos... 34 2.6
UniRef50_Q54RT9 Cluster: Putative uncharacterized protein; n=1; ... 34 3.4
UniRef50_UPI0000DB7CCD Cluster: PREDICTED: similar to Rab gerany... 33 4.5
UniRef50_Q76L90 Cluster: Protein farnesyltransferase alpha subun... 33 4.5
UniRef50_A7NUL1 Cluster: Chromosome chr18 scaffold_1, whole geno... 33 6.0
UniRef50_A0D1X7 Cluster: Chromosome undetermined scaffold_340, w... 33 6.0
UniRef50_Q2ZZJ6 Cluster: Putative uncharacterized protein; n=3; ... 33 7.9
UniRef50_A3YH56 Cluster: Putative uncharacterized protein; n=1; ... 33 7.9
UniRef50_Q22RW4 Cluster: MCM2/3/5 family protein; n=3; Eukaryota... 33 7.9
UniRef50_A5K1V0 Cluster: Trancription factor, putative; n=5; Pla... 33 7.9
UniRef50_Q7Z6K3 Cluster: Protein prenyltransferase alpha subunit... 33 7.9
UniRef50_A3DLP0 Cluster: Putative uncharacterized protein precur... 33 7.9
>UniRef50_Q921J9 Cluster: Rabggta protein; n=5; Euteleostomi|Rep:
Rabggta protein - Mus musculus (Mouse)
Length = 317
Score = 77.0 bits (181), Expect = 4e-13
Identities = 36/74 (48%), Positives = 48/74 (64%)
Frame = +3
Query: 360 MHGRVKVXTSEEXKARKEKXXNEKLKIFKHAMQKIQIKRKECTLDKELLELTGNVLSSNP 539
MHGR+KV TSEE K +KLK+++ A Q + KR+ LD+ +LELT +L +NP
Sbjct: 1 MHGRLKVKTSEEQAEAKRLEREQKLKLYQSATQAVFQKREAGELDESVLELTSQILGANP 60
Query: 540 DIYTLWNIXREILQ 581
D TLWN RE+LQ
Sbjct: 61 DFATLWNCRREVLQ 74
>UniRef50_Q92696 Cluster: Geranylgeranyl transferase type-2 subunit
alpha; n=30; Deuterostomia|Rep: Geranylgeranyl
transferase type-2 subunit alpha - Homo sapiens (Human)
Length = 567
Score = 77.0 bits (181), Expect = 4e-13
Identities = 36/74 (48%), Positives = 48/74 (64%)
Frame = +3
Query: 360 MHGRVKVXTSEEXKARKEKXXNEKLKIFKHAMQKIQIKRKECTLDKELLELTGNVLSSNP 539
MHGR+KV TSEE K +KLK+++ A Q + KR+ LD+ +LELT +L +NP
Sbjct: 1 MHGRLKVKTSEEQAEAKRLEREQKLKLYQSATQAVFQKRQAGELDESVLELTSQILGANP 60
Query: 540 DIYTLWNIXREILQ 581
D TLWN RE+LQ
Sbjct: 61 DFATLWNCRREVLQ 74
>UniRef50_Q9VN77 Cluster: CG12007-PA; n=2; Sophophora|Rep:
CG12007-PA - Drosophila melanogaster (Fruit fly)
Length = 515
Score = 74.9 bits (176), Expect = 1e-12
Identities = 36/71 (50%), Positives = 48/71 (67%)
Frame = +3
Query: 360 MHGRVKVXTSEEXKARKEKXXNEKLKIFKHAMQKIQIKRKECTLDKELLELTGNVLSSNP 539
MHGRVKV T+EE + RK+K K++ ++ AM +IQ KR+ LD E+L LT +L NP
Sbjct: 1 MHGRVKVRTTEEERERKKKEQALKVRAYRAAMGRIQKKREAGELDNEMLSLTVQILLRNP 60
Query: 540 DIYTLWNIXRE 572
D+ LWNI RE
Sbjct: 61 DVSMLWNIRRE 71
>UniRef50_Q17NP5 Cluster: Rab geranylgeranyl transferase alpha
subunit; n=2; Culicidae|Rep: Rab geranylgeranyl
transferase alpha subunit - Aedes aegypti (Yellowfever
mosquito)
Length = 532
Score = 74.9 bits (176), Expect = 1e-12
Identities = 35/75 (46%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Frame = +3
Query: 363 HGRVKVXTSEEXKARKEKXXNEKLKIFKHAMQKIQIKRKECTLDKELLELTGNVLSSNPD 542
HGR+KV TS E ARK+K +K K F+ M +I +K+ LD+E+++LT +L++NPD
Sbjct: 1 HGRLKVRTSAEEAARKQKEREQKAKAFRAGMGRILMKKVTDELDEEMMQLTAKILAANPD 60
Query: 543 IYTLWNIXRE-ILQL 584
+ TLWN+ R IL+L
Sbjct: 61 VATLWNLRRRCILKL 75
>UniRef50_UPI0000D561D5 Cluster: PREDICTED: similar to Rab
geranylgeranyl transferase, a subunit; n=1; Tribolium
castaneum|Rep: PREDICTED: similar to Rab geranylgeranyl
transferase, a subunit - Tribolium castaneum
Length = 314
Score = 70.9 bits (166), Expect = 2e-11
Identities = 35/79 (44%), Positives = 48/79 (60%)
Frame = +3
Query: 363 HGRVKVXTSEEXKARKEKXXNEKLKIFKHAMQKIQIKRKECTLDKELLELTGNVLSSNPD 542
HGR+KV TSEE K +K+K +KL ++ M++I R + D L L+G +LS NPD
Sbjct: 6 HGRIKVRTSEEQKLQKQKEQQKKLVAYRMGMKQILSTRNKENYDPASLLLSGQLLSVNPD 65
Query: 543 IYTLWNIXREILQLFKKSN 599
IYTLWN +E + K N
Sbjct: 66 IYTLWNYRKEATLMELKEN 84
>UniRef50_Q9TYY0 Cluster: Putative uncharacterized protein M57.2;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein M57.2 - Caenorhabditis elegans
Length = 580
Score = 70.5 bits (165), Expect = 3e-11
Identities = 34/84 (40%), Positives = 50/84 (59%)
Frame = +3
Query: 360 MHGRVKVXTSEEXKARKEKXXNEKLKIFKHAMQKIQIKRKECTLDKELLELTGNVLSSNP 539
MH KV T+EE KA K+K ++ + F H KI KR++ D E+L LT +L N
Sbjct: 1 MHFVKKVPTTEEEKAAKQKEHTKRSQQFLHVRDKIVAKREKGEYDDEILSLTQAILEKNA 60
Query: 540 DIYTLWNIXREILQLFKKSNDNIE 611
DIYT WNI R ++L ++N+ ++
Sbjct: 61 DIYTFWNIRRTTIELRMEANEKVQ 84
>UniRef50_Q5BZ45 Cluster: SJCHGC04459 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC04459 protein - Schistosoma
japonicum (Blood fluke)
Length = 209
Score = 64.1 bits (149), Expect = 3e-09
Identities = 38/98 (38%), Positives = 60/98 (61%), Gaps = 2/98 (2%)
Frame = +3
Query: 360 MHGRVKVX-TSEEXKARKEKXXNEKLKIFKHAMQKIQIKRKECTLDKELLELTGNVLSSN 536
MHGRVKV T+E+ +ARK K K F+ +K+ + R++ D+ LE +++ ++
Sbjct: 21 MHGRVKVIQTAEQERARKLKKDQISKKFFEEC-EKLWVCREKENFDEMQLEKIDSLIETS 79
Query: 537 PDIYTLWNIXREI-LQLFKKSNDNIEXMSQVYNAXLHL 647
PD TLWN REI L LFKK +++ E +S++ + L L
Sbjct: 80 PDTATLWNYRREILLHLFKKYSEDQEKVSKLLESELGL 117
>UniRef50_A7SL75 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 285
Score = 52.4 bits (120), Expect = 9e-06
Identities = 25/65 (38%), Positives = 37/65 (56%)
Frame = +3
Query: 432 LKIFKHAMQKIQIKRKECTLDKELLELTGNVLSSNPDIYTLWNIXREILQLFKKSNDNIE 611
+K+F QKI KR++ D+E L+LT +L NPD+ TLWN REI +++ E
Sbjct: 1 MKLFSDLDQKINKKREKREFDEEALDLTEQILGVNPDVSTLWNFRREIFLKWREDGGFTE 60
Query: 612 XMSQV 626
+ V
Sbjct: 61 KLVNV 65
>UniRef50_O94412 Cluster: Rab geranylgeranyltransferase; n=1;
Schizosaccharomyces pombe|Rep: Rab
geranylgeranyltransferase - Schizosaccharomyces pombe
(Fission yeast)
Length = 344
Score = 51.2 bits (117), Expect = 2e-05
Identities = 25/73 (34%), Positives = 41/73 (56%)
Frame = +3
Query: 360 MHGRVKVXTSEEXKARKEKXXNEKLKIFKHAMQKIQIKRKECTLDKELLELTGNVLSSNP 539
MHG ++V SEE + K + K++ ++ + + Q RK + L+LT +L NP
Sbjct: 1 MHGILRVKLSEEQRKLKAEKERAKIEEYRGLVSRFQEARKRKDYSEGNLKLTTELLDWNP 60
Query: 540 DIYTLWNIXREIL 578
+ Y++WN REIL
Sbjct: 61 ETYSVWNYRREIL 73
>UniRef50_Q6C601 Cluster: Yarrowia lipolytica chromosome E of strain
CLIB 122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome E of
strain CLIB 122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 347
Score = 49.6 bits (113), Expect = 6e-05
Identities = 25/74 (33%), Positives = 38/74 (51%)
Frame = +3
Query: 360 MHGRVKVXTSEEXKARKEKXXNEKLKIFKHAMQKIQIKRKECTLDKELLELTGNVLSSNP 539
MH K S E A K++ K+ + ++ R+E DKE L+L ++ NP
Sbjct: 1 MHNVRKQKYSAEQLAEKKQLEKGKINAYNGLSTQVNQFRREGKHDKEALDLNTKLIKINP 60
Query: 540 DIYTLWNIXREILQ 581
+ YT+WN REIL+
Sbjct: 61 EFYTMWNYRREILK 74
>UniRef50_O93829 Cluster: Geranylgeranyl transferase type-2 subunit
alpha; n=5; Saccharomycetales|Rep: Geranylgeranyl
transferase type-2 subunit alpha - Candida albicans
(Yeast)
Length = 371
Score = 49.2 bits (112), Expect = 8e-05
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 2/96 (2%)
Frame = +3
Query: 363 HGRVKVXTSEEXKARKEKXXNEKLKIFKHAMQKI-QIKRKECTLDKELLELTGNVLSSNP 539
HG +V SEE K K + K+K ++ +I +++ E D+ L++ T +L NP
Sbjct: 3 HGIKRVKLSEEAKRLKLEKDQIKIKNYRQLTDEIFELRANENYSDEALIK-TNELLIINP 61
Query: 540 DIYTLWNIXREIL-QLFKKSNDNIEXMSQVYNAXLH 644
+ YT+WN REIL + SND + Q+Y L+
Sbjct: 62 EFYTIWNYRREILINNYSSSNDKDD---QIYEDILN 94
>UniRef50_Q55DQ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 335
Score = 46.4 bits (105), Expect = 6e-04
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Frame = +3
Query: 360 MHGRVKVXTSEEXKARKEKXXNEKLKIFKHAMQKIQIKRKECT--LDKELLELTGNVLSS 533
MHG +KV TSEE + EK++ + ++ + R++ D+ L ++ VL
Sbjct: 1 MHGVLKVRTSEEKAKAQRLKELEKIESYNKLVKSFEELREKQNGRYDEISLSVSKLVLIE 60
Query: 534 NPDIYTLWNIXREILQLFKKSNDNIE 611
NP+ YT+WN R + F ++ +N E
Sbjct: 61 NPEFYTIWNYRRLAILQFTETKENSE 86
>UniRef50_Q5CIB7 Cluster: Rab geranylgeranyltransferase, alpha
subunit isoform a; n=2; Cryptosporidium|Rep: Rab
geranylgeranyltransferase, alpha subunit isoform a -
Cryptosporidium hominis
Length = 567
Score = 45.6 bits (103), Expect = 0.001
Identities = 24/83 (28%), Positives = 43/83 (51%)
Frame = +3
Query: 360 MHGRVKVXTSEEXKARKEKXXNEKLKIFKHAMQKIQIKRKECTLDKELLELTGNVLSSNP 539
MHGRVK E + K+ K ++F ++ I +K+ T + LELT +L N
Sbjct: 1 MHGRVKSEQKELTEEEKQYIERAK-RLFDECIELINQDQKKSTFSAKTLELTEKILKINT 59
Query: 540 DIYTLWNIXREILQLFKKSNDNI 608
++ T+WN + + + ++SN +
Sbjct: 60 EVATMWNFRKSYI-VSEQSNTQL 81
>UniRef50_A5K3Y5 Cluster: Protein prenyltransferase alpha subunit,
putative; n=1; Plasmodium vivax|Rep: Protein
prenyltransferase alpha subunit, putative - Plasmodium
vivax
Length = 534
Score = 44.8 bits (101), Expect = 0.002
Identities = 26/74 (35%), Positives = 41/74 (55%)
Frame = +3
Query: 360 MHGRVKVXTSEEXKARKEKXXNEKLKIFKHAMQKIQIKRKECTLDKELLELTGNVLSSNP 539
MHGR + +S++ KA+ EK E + + H ++K + E + DKE +E T +L P
Sbjct: 1 MHGR-RASSSKDEKAKLEKV-KELIPLVNHLIKK----KNEKSYDKEYIETTSVILRRCP 54
Query: 540 DIYTLWNIXREILQ 581
+ TLWN RE +
Sbjct: 55 YLQTLWNFRREYFE 68
>UniRef50_A6QWC8 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 378
Score = 41.9 bits (94), Expect = 0.013
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +3
Query: 363 HGRVKVXTSEEXKARKEKXXNEKLKIFKHAMQKIQIKRKECTLDKELLELTGNVLSSNPD 542
HG + S + ++K++ + + + +R E E L T +L+ NP+
Sbjct: 4 HGVPRYNASMRRTEAAWQKESQKIQTYNELVSIVNSQRAEHDFSTEALNKTSELLTKNPE 63
Query: 543 IYTLWNIXREILQ-LFKKSNDNIE 611
YT+WN R ILQ F K+ + E
Sbjct: 64 YYTIWNTRRLILQHQFSKATSSGE 87
>UniRef50_Q8IL46 Cluster: Protein prenyltransferase alpha subunit,
putative; n=1; Plasmodium falciparum 3D7|Rep: Protein
prenyltransferase alpha subunit, putative - Plasmodium
falciparum (isolate 3D7)
Length = 563
Score = 40.7 bits (91), Expect = 0.030
Identities = 25/77 (32%), Positives = 38/77 (49%)
Frame = +3
Query: 360 MHGRVKVXTSEEXKARKEKXXNEKLKIFKHAMQKIQIKRKECTLDKELLELTGNVLSSNP 539
MHGR EE +AR +K E + + + ++K +K DKE ++ T +L P
Sbjct: 1 MHGRRANRAQEEEQARLQKV-KELIPLVNNLIKK----KKTNNYDKEYIDRTSLILMKCP 55
Query: 540 DIYTLWNIXREILQLFK 590
+ TLWN RE + K
Sbjct: 56 YLQTLWNYRREYFEYIK 72
>UniRef50_Q4P3U2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 600
Score = 39.5 bits (88), Expect = 0.069
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = +3
Query: 360 MHG---RVKVXTSEEXKARKEKXXNEKLKIFKHAMQKIQIKRKECTLDKELLELTGNVLS 530
MHG + K + E +A ++ KL + Q ++ D L T +L+
Sbjct: 141 MHGVKRQPKTAATAEARAARKAKEAAKLAAYLEVEQTFFEYKRSARKDTTALHHTTKLLT 200
Query: 531 SNPDIYTLWNIXREIL 578
NP++YT+WN R++L
Sbjct: 201 LNPELYTVWNYRRQVL 216
>UniRef50_Q5K762 Cluster: RAB-protein geranylgeranyltransferase,
putative; n=1; Filobasidiella neoformans|Rep:
RAB-protein geranylgeranyltransferase, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 330
Score = 38.3 bits (85), Expect = 0.16
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +3
Query: 360 MHGRVKVXTSEEXKARKEKXXNEKLKIFKHAMQKIQIKRKECT-LDKELLELTGNVLSSN 536
MHG + + + K K++ + A++K + RK +E L T +L N
Sbjct: 1 MHGIKRSRLTPQAAEAKRLKEQSKIETYL-ALEKDVLTRKSAKEYSEEALGKTTQLLDLN 59
Query: 537 PDIYTLWNIXREIL 578
P+ YT+WN R+IL
Sbjct: 60 PEFYTIWNYRRDIL 73
>UniRef50_A1CWQ9 Cluster: Protein prenyltransferase alpha subunit
repeat protein; n=7; Trichocomaceae|Rep: Protein
prenyltransferase alpha subunit repeat protein -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 364
Score = 38.3 bits (85), Expect = 0.16
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = +3
Query: 363 HGRVKVXTSEEXKARKEKXXNEKLKIFKHAMQKIQIKRKECTLDKELLELTGNVLSSNPD 542
HG + + E + K++ ++ + ++ K E E L+ +LSSNP+
Sbjct: 4 HGIPRYSSLGERSEEALQQELRKIQNYQALDRLVRDKIAEHDYTPETLQKISELLSSNPE 63
Query: 543 IYTLWNIXREILQ---LFKKSNDNIEXMS 620
YT+WN R +LQ SND+ E ++
Sbjct: 64 YYTVWNYRRRVLQHEFNLASSNDSEEAVT 92
>UniRef50_Q00618 Cluster: Geranylgeranyl transferase type-2 subunit
alpha; n=6; Saccharomycetales|Rep: Geranylgeranyl
transferase type-2 subunit alpha - Saccharomyces
cerevisiae (Baker's yeast)
Length = 327
Score = 36.7 bits (81), Expect = 0.48
Identities = 18/73 (24%), Positives = 34/73 (46%)
Frame = +3
Query: 360 MHGRVKVXTSEEXKARKEKXXNEKLKIFKHAMQKIQIKRKECTLDKELLELTGNVLSSNP 539
MHG + ++E +K +K+ ++ + + R E E L+ T +L NP
Sbjct: 1 MHGIKRKQWTKELLRQKRVQDEKKIYDYRSLTENVLNMRDEKIYSIEALKKTSELLEKNP 60
Query: 540 DIYTLWNIXREIL 578
+ +WN R+I+
Sbjct: 61 EFNAIWNYRRDII 73
>UniRef50_UPI000065D014 Cluster: Protein prenyltransferase alpha
subunit repeat containing 1.; n=1; Takifugu
rubripes|Rep: Protein prenyltransferase alpha subunit
repeat containing 1. - Takifugu rubripes
Length = 430
Score = 36.3 bits (80), Expect = 0.64
Identities = 15/38 (39%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Frame = +3
Query: 471 KRKECTLDKE-LLELTGNVLSSNPDIYTLWNIXREILQ 581
++++ LD+E L+++T +L NPD T WN+ +E+LQ
Sbjct: 47 RQRKHWLDREALVDITSTLLLLNPDFTTAWNVRKELLQ 84
>UniRef50_Q08CA2 Cluster: LOC561820 protein; n=9; Euteleostomi|Rep:
LOC561820 protein - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 431
Score = 35.1 bits (77), Expect = 1.5
Identities = 15/38 (39%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Frame = +3
Query: 471 KRKECTLDKE-LLELTGNVLSSNPDIYTLWNIXREILQ 581
++++ LD+E L+++T +L NPD T WN+ +E+LQ
Sbjct: 81 RQRKQWLDREALVDITCTLLLLNPDFTTAWNVRKELLQ 118
>UniRef50_Q4YXA5 Cluster: Protein prenyltransferase alpha subunit,
putative; n=3; Plasmodium (Vinckeia)|Rep: Protein
prenyltransferase alpha subunit, putative - Plasmodium
berghei
Length = 467
Score = 35.1 bits (77), Expect = 1.5
Identities = 16/62 (25%), Positives = 32/62 (51%)
Frame = +3
Query: 405 RKEKXXNEKLKIFKHAMQKIQIKRKECTLDKELLELTGNVLSSNPDIYTLWNIXREILQL 584
++E EK+K + + IK+K +K+ ++++ +L P I TLWN ++ +
Sbjct: 10 KEEYGKLEKVKELIPVVNDLIIKKKTSKYEKKYIQMSSTILRKCPYIQTLWNYRKKYFEF 69
Query: 585 FK 590
K
Sbjct: 70 IK 71
>UniRef50_Q96U26 Cluster: Related to geranylgeranyl transferase
alpha chain; n=2; Sordariomycetes|Rep: Related to
geranylgeranyl transferase alpha chain - Neurospora
crassa
Length = 419
Score = 34.7 bits (76), Expect = 2.0
Identities = 16/72 (22%), Positives = 35/72 (48%)
Frame = +3
Query: 363 HGRVKVXTSEEXKARKEKXXNEKLKIFKHAMQKIQIKRKECTLDKELLELTGNVLSSNPD 542
HG + + + R++ E++K ++ +++ + ++ LT +L NP+
Sbjct: 9 HGIARTSRTRTEEQRQKDL--ERIKDYRALEDQVRHHAAKNDYSSDVFALTSKLLRLNPE 66
Query: 543 IYTLWNIXREIL 578
YT+WN+ R L
Sbjct: 67 YYTVWNVRRRCL 78
>UniRef50_UPI00004999D2 Cluster: conserved hypothetical protein; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: conserved
hypothetical protein - Entamoeba histolytica HM-1:IMSS
Length = 1738
Score = 34.3 bits (75), Expect = 2.6
Identities = 19/68 (27%), Positives = 32/68 (47%)
Frame = +3
Query: 390 EEXKARKEKXXNEKLKIFKHAMQKIQIKRKECTLDKELLELTGNVLSSNPDIYTLWNIXR 569
EE K ++EK E+ +I+K + I EL + N S N + W+ +
Sbjct: 803 EEFKQKREKWRKERKEIYKRIYDIVDITDYIKEEPVELKGVIENNASENASLLVKWDNVK 862
Query: 570 EILQLFKK 593
E+ ++FKK
Sbjct: 863 EVSEMFKK 870
>UniRef50_Q8RA32 Cluster: DNA polymerase III polC-type; n=7;
Clostridia|Rep: DNA polymerase III polC-type -
Thermoanaerobacter tengcongensis
Length = 1401
Score = 34.3 bits (75), Expect = 2.6
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +3
Query: 312 ESLRLNFVVLKF--N*AEMHGRVKVXTSEEXKARKEKXXNEKLKIFKHAMQKIQIKRKEC 485
+S +L+F + +F N E++ V++ SEE + EK E +K + +QK + +KE
Sbjct: 119 KSSKLDFAIREFLRNRYELNLDVELIFSEEGEEIAEKIIEEDIKAIEEVIQKDEKSKKEK 178
Query: 486 TLDKELLELTGNVLSSNP 539
+ +E L G + + P
Sbjct: 179 SRSEENRVLLGKEMKAKP 196
>UniRef50_Q54RT9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 322
Score = 33.9 bits (74), Expect = 3.4
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Frame = +3
Query: 435 KIFKHAMQKIQ--IKRKECTLDKELLELTGNVLSSNPDIYTLWNIXREILQLFKKSNDNI 608
++FK M + +K KE +L +L+L V+ NP YT+W RE+L+ ++ ++ I
Sbjct: 41 EVFKDKMNYFRAILKSKEKSL--RVLDLLEEVIQENPSNYTIWYYRREVLKAIEQ-DETI 97
Query: 609 E 611
E
Sbjct: 98 E 98
>UniRef50_UPI0000DB7CCD Cluster: PREDICTED: similar to Rab
geranylgeranyltransferase, alpha subunit, partial; n=1;
Apis mellifera|Rep: PREDICTED: similar to Rab
geranylgeranyltransferase, alpha subunit, partial - Apis
mellifera
Length = 91
Score = 33.5 bits (73), Expect = 4.5
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +3
Query: 510 LTGNVLSSNPDIYTLWNIXRE 572
+T ++ NPDIYTLWNI RE
Sbjct: 2 VTERMVLQNPDIYTLWNIRRE 22
>UniRef50_Q76L90 Cluster: Protein farnesyltransferase alpha subunit;
n=1; Entamoeba histolytica|Rep: Protein
farnesyltransferase alpha subunit - Entamoeba
histolytica
Length = 298
Score = 33.5 bits (73), Expect = 4.5
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +3
Query: 435 KIFKHAMQKIQIKRKECTLDKELLELTGNVLSSNPDIYTLWNIXREILQLFKKSND 602
KIFK M + + L + LE+TG V+ N Y+ W R IL+ + + D
Sbjct: 34 KIFKEVMGYYRALMAKGELSERALEITGKVIEMNSADYSAWYYRRRILKKMEGTFD 89
>UniRef50_A7NUL1 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 696
Score = 33.1 bits (72), Expect = 6.0
Identities = 20/67 (29%), Positives = 30/67 (44%)
Frame = +3
Query: 360 MHGRVKVXTSEEXKARKEKXXNEKLKIFKHAMQKIQIKRKECTLDKELLELTGNVLSSNP 539
MHGR + E A EKL+ + ++ KE LE++ +L +NP
Sbjct: 1 MHGRPRKAPKPEDAAASAAKA-EKLRALQ---SQLLHNHHNQIYTKEALEISAKLLEANP 56
Query: 540 DIYTLWN 560
+ YT WN
Sbjct: 57 ESYTAWN 63
>UniRef50_A0D1X7 Cluster: Chromosome undetermined scaffold_340,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_340,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 486
Score = 33.1 bits (72), Expect = 6.0
Identities = 17/43 (39%), Positives = 21/43 (48%)
Frame = +3
Query: 495 KELLELTGNVLSSNPDIYTLWNIXREILQLFKKSNDNIEXMSQ 623
+E +E V+S NP Y WN LQ KK D IE +Q
Sbjct: 211 QEAIECYDKVISINPKYYVSWNNKGTSLQSLKKFQDAIECFNQ 253
>UniRef50_Q2ZZJ6 Cluster: Putative uncharacterized protein; n=3;
Streptococcus suis|Rep: Putative uncharacterized protein
- Streptococcus suis 89/1591
Length = 220
Score = 32.7 bits (71), Expect = 7.9
Identities = 22/76 (28%), Positives = 35/76 (46%)
Frame = +3
Query: 405 RKEKXXNEKLKIFKHAMQKIQIKRKECTLDKELLELTGNVLSSNPDIYTLWNIXREILQL 584
R EK K+ + + + K T + L T +L+ P +Y+L RE Q+
Sbjct: 121 RDEKPAPAKVVVKPPVVSTTESKAGRLTRLADNLRQTDYILADMPAVYSLKKEDREQEQV 180
Query: 585 FKKSNDNIEXMSQVYN 632
KK++ + SQVYN
Sbjct: 181 IKKNSYDFLRKSQVYN 196
>UniRef50_A3YH56 Cluster: Putative uncharacterized protein; n=1;
Marinomonas sp. MED121|Rep: Putative uncharacterized
protein - Marinomonas sp. MED121
Length = 334
Score = 32.7 bits (71), Expect = 7.9
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = -1
Query: 325 KRSDSLYIFVQL*VQNIFXSFFGALIYFKRTPTNVFQDKVFTN*S--SDYKITMLNYFSL 152
KR Y+ + + SFFG + KR +VFQ KV+ + + +DYK ++N F L
Sbjct: 21 KRVSLTYLLSAFIIALLSLSFFGHKLPIKRAVRHVFQAKVWWSATAFADYKTLVINAFIL 80
Query: 151 YVVN 140
+++
Sbjct: 81 KLIS 84
>UniRef50_Q22RW4 Cluster: MCM2/3/5 family protein; n=3; Eukaryota|Rep:
MCM2/3/5 family protein - Tetrahymena thermophila SB210
Length = 1681
Score = 32.7 bits (71), Expect = 7.9
Identities = 21/65 (32%), Positives = 36/65 (55%)
Frame = +3
Query: 390 EEXKARKEKXXNEKLKIFKHAMQKIQIKRKECTLDKELLELTGNVLSSNPDIYTLWNIXR 569
E K +KEK ++I + KIQ R+E T D+++ EL ++ P+IY L ++ +
Sbjct: 1245 ESYKIQKEKKSYSDMQIEEDIQIKIQEMREEMT-DEQIYELLARSIA--PEIYGLEDVKK 1301
Query: 570 EILQL 584
+L L
Sbjct: 1302 ALLLL 1306
>UniRef50_A5K1V0 Cluster: Trancription factor, putative; n=5;
Plasmodium|Rep: Trancription factor, putative -
Plasmodium vivax
Length = 1213
Score = 32.7 bits (71), Expect = 7.9
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Frame = +3
Query: 372 VKVXTSEEXKARKEKXXNEKLKIFKHAMQKIQIKRKECTL----DKELLELTGNVLSSNP 539
+ V T+ AR + NE+L++ A+Q + K+KE L D+E +E G V+ P
Sbjct: 414 IPVGTAIGGDARNGQTANEQLELLDEALQIKRKKKKERPLKKLFDREEIEQIGGVIEHGP 473
Query: 540 DIYTLW---NIXREILQLFKKSN 599
T+ NI E L KK N
Sbjct: 474 YPRTIKYQNNIFEENGYLLKKMN 496
>UniRef50_Q7Z6K3 Cluster: Protein prenyltransferase alpha subunit
repeat-containing protein 1; n=28; Amniota|Rep: Protein
prenyltransferase alpha subunit repeat-containing
protein 1 - Homo sapiens (Human)
Length = 403
Score = 32.7 bits (71), Expect = 7.9
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 474 RKECTLDKELLELTGNVLSSNPDIYTLWNIXREIL 578
RK+ EL+++T +L NPD T WN+ +E++
Sbjct: 79 RKQWLNRDELIDVTCTLLLLNPDFTTAWNVRKELI 113
>UniRef50_A3DLP0 Cluster: Putative uncharacterized protein
precursor; n=1; Staphylothermus marinus F1|Rep: Putative
uncharacterized protein precursor - Staphylothermus
marinus (strain ATCC 43588 / DSM 3639 / F1)
Length = 482
Score = 32.7 bits (71), Expect = 7.9
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +1
Query: 442 SNMPCKKF-KSREKNALLIKNYWN*QEMYYLLILTFTLYGI*XEKFYNYLKKAMII 606
+N+ KKF K++EK +LIK YW ++++ F L + K YN L+ I+
Sbjct: 363 ANLLDKKFLKNKEK--ILIKRYWELLRQAFIIVKNFDLEEVLASKSYNKLRVLGIV 416
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 448,983,609
Number of Sequences: 1657284
Number of extensions: 7128997
Number of successful extensions: 13964
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 13480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13946
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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