BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_E11
(653 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D55C82 Cluster: PREDICTED: similar to CG7429-PA;... 87 3e-16
UniRef50_UPI00015B4BB8 Cluster: PREDICTED: similar to GA20344-PA... 87 3e-16
UniRef50_Q9VLT8 Cluster: CG7429-PA; n=2; Sophophora|Rep: CG7429-... 80 4e-14
UniRef50_UPI0000DB6F7A Cluster: PREDICTED: similar to Coiled-coi... 80 5e-14
UniRef50_Q7Q9T7 Cluster: ENSANGP00000003388; n=2; Culicidae|Rep:... 78 2e-13
UniRef50_Q9Y3C0 Cluster: Coiled-coil domain-containing protein 5... 77 4e-13
UniRef50_Q9CYF6 Cluster: 8 days embryo whole body cDNA, RIKEN fu... 70 6e-11
UniRef50_UPI0000E46388 Cluster: PREDICTED: hypothetical protein,... 61 2e-08
UniRef50_A7RF75 Cluster: Predicted protein; n=1; Nematostella ve... 57 3e-07
UniRef50_Q55FU3 Cluster: Putative uncharacterized protein; n=1; ... 55 2e-06
UniRef50_Q01LZ2 Cluster: OSIGBa0157N01.9 protein; n=2; Oryza sat... 53 5e-06
UniRef50_A0DD37 Cluster: Chromosome undetermined scaffold_46, wh... 48 2e-04
UniRef50_Q7XL21 Cluster: OSJNBa0079M09.10 protein; n=3; Oryza sa... 44 0.003
UniRef50_A2F9Y4 Cluster: Putative uncharacterized protein; n=1; ... 44 0.004
UniRef50_Q4D5Y0 Cluster: Putative uncharacterized protein; n=3; ... 43 0.006
UniRef50_Q23G58 Cluster: Putative uncharacterized protein; n=1; ... 38 0.21
UniRef50_Q4QDH5 Cluster: Putative uncharacterized protein; n=3; ... 37 0.49
UniRef50_Q5C9Z4 Cluster: Nucleolar MIF4G domain-containing prote... 37 0.49
UniRef50_UPI0000D9AA5D Cluster: PREDICTED: similar to nucleolar ... 35 2.0
UniRef50_O01901 Cluster: Daf-16-dependent longevity protein 1; n... 35 2.0
UniRef50_Q89A39 Cluster: Protein hflK; n=1; Buchnera aphidicola ... 33 7.9
>UniRef50_UPI0000D55C82 Cluster: PREDICTED: similar to CG7429-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG7429-PA - Tribolium castaneum
Length = 152
Score = 87.4 bits (207), Expect = 3e-16
Identities = 48/138 (34%), Positives = 72/138 (52%)
Frame = +1
Query: 238 SESPQTDLTKVAALHQKRTLAFVNHFLTINVQFLNNFMRNCEQKLMQFERKLXKVNAAMV 417
S P D T++ + QKRT+AF+NHF+ V FLN+F ++CE +LM+FE KL +V A+++
Sbjct: 8 SIDPNVDYTQILPIQQKRTIAFINHFVMNTVSFLNHFAQSCESRLMEFEYKLQEVEASLL 67
Query: 418 LLXSKLSSIPELDIPKXXXXXXXXXXXXXXXXXXXXXXXXXXXRKLXXLAPPEMKTKPEY 597
+L S+L SI L+ + P++ + P Y
Sbjct: 68 ILESQLGSIAHLE------ENTAKDSPKQNDLDLPPVKDEETQIEKNVEVEPDVASDPRY 121
Query: 598 DKFVKMVQVGVPLQAVKL 651
+F KM+Q GVP AVKL
Sbjct: 122 QRFFKMLQFGVPPAAVKL 139
>UniRef50_UPI00015B4BB8 Cluster: PREDICTED: similar to GA20344-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
GA20344-PA - Nasonia vitripennis
Length = 191
Score = 87.0 bits (206), Expect = 3e-16
Identities = 51/148 (34%), Positives = 73/148 (49%), Gaps = 13/148 (8%)
Frame = +1
Query: 247 PQTDLTKVAALHQKRTLAFVNHFLTINVQFLNNFMRNCEQKLMQFERKLXKVNAAMVLLX 426
P D TKV ++QKRT+AF+NHF+ + FLN F +CE+KL FE KL +V A++ +L
Sbjct: 11 PTVDYTKVPPINQKRTIAFINHFIAHTITFLNKFALSCEEKLFDFENKLQRVEASLAILE 70
Query: 427 SKLSSIPELDIPKXXXXXXXXXXXXXXXXXXXXXXXXXXXRKL---XXLAPPEMKTK--- 588
++LSSIP ++ +++ P E K +
Sbjct: 71 ARLSSIPAVENEPQQAVQAPTAEVEDKSKVEETQQVEVTAQEIDEPDNEVPIEPKVEETE 130
Query: 589 -------PEYDKFVKMVQVGVPLQAVKL 651
P+Y K+ KMV GVP QAVKL
Sbjct: 131 TQPISSDPQYAKYFKMVHFGVPKQAVKL 158
>UniRef50_Q9VLT8 Cluster: CG7429-PA; n=2; Sophophora|Rep: CG7429-PA
- Drosophila melanogaster (Fruit fly)
Length = 176
Score = 80.2 bits (189), Expect = 4e-14
Identities = 52/149 (34%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
Frame = +1
Query: 226 DLTQSESPQTDLTKVAALHQKRTLAFVNHFLTINVQFLNNFMRNCEQKLMQFERKLXKVN 405
D T + + D T++ L+QKR LAFVNHFL FLN F CE K ++ ER+L K
Sbjct: 2 DATAAITGNVDKTQIPPLNQKRILAFVNHFLVSTCTFLNEFALGCETKFVEMERQLQKTE 61
Query: 406 AAMVLLXSKLSSIP---ELDIPKXXXXXXXXXXXXXXXXXXXXXXXXXXXRKLXXLAPPE 576
AA+++L +KL+SIP + PPE
Sbjct: 62 AALIILEAKLASIPTEHHVATEATEAPAISNQQRNEEASMVDTTEPPTTENPTEPELPPE 121
Query: 577 MK-----TKPEYDKFVKMVQVGVPLQAVK 648
Y KF KMVQVGVP AVK
Sbjct: 122 SVGVRACEDQRYRKFFKMVQVGVPAPAVK 150
>UniRef50_UPI0000DB6F7A Cluster: PREDICTED: similar to Coiled-coil
domain-containing protein 53; n=1; Apis mellifera|Rep:
PREDICTED: similar to Coiled-coil domain-containing
protein 53 - Apis mellifera
Length = 160
Score = 79.8 bits (188), Expect = 5e-14
Identities = 35/70 (50%), Positives = 51/70 (72%)
Frame = +1
Query: 247 PQTDLTKVAALHQKRTLAFVNHFLTINVQFLNNFMRNCEQKLMQFERKLXKVNAAMVLLX 426
P D TKV ++QKRT++F+NHF+ V FLN F +CE++L+QFE KL ++ A++ +L
Sbjct: 11 PTIDCTKVPPINQKRTISFINHFIVHTVTFLNKFTLSCEERLLQFEYKLQRIEASLEILE 70
Query: 427 SKLSSIPELD 456
S LSSIP L+
Sbjct: 71 SWLSSIPGLE 80
>UniRef50_Q7Q9T7 Cluster: ENSANGP00000003388; n=2; Culicidae|Rep:
ENSANGP00000003388 - Anopheles gambiae str. PEST
Length = 161
Score = 77.8 bits (183), Expect = 2e-13
Identities = 42/131 (32%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Frame = +1
Query: 280 HQKRTLAFVNHFLTINVQFLNNFMRNCEQKLMQFERKLXKVNAAMVLLXSKLSSIPEL-- 453
+QKR +AF+NHF+ V FLN F +CE K + +E+K+ + A+++++ +KL+SI L
Sbjct: 15 NQKRMVAFINHFIVSTVTFLNKFASDCESKFVTYEQKIQNLEASLLIVEAKLASIDVLKQ 74
Query: 454 --DIPKXXXXXXXXXXXXXXXXXXX----XXXXXXXXRKLXXLAPPEMKTKPEYDKFVKM 615
D P ++ L PP ++ P+YD + KM
Sbjct: 75 LNDGPPASAEMKPSDSQPTALGSSDGEPVSAAELQSQPEISTLNPPALERDPKYDLYFKM 134
Query: 616 VQVGVPLQAVK 648
+Q+GVPL AVK
Sbjct: 135 LQLGVPLGAVK 145
>UniRef50_Q9Y3C0 Cluster: Coiled-coil domain-containing protein 53;
n=13; Eutheria|Rep: Coiled-coil domain-containing
protein 53 - Homo sapiens (Human)
Length = 194
Score = 77.0 bits (181), Expect = 4e-13
Identities = 46/140 (32%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
Frame = +1
Query: 256 DLTKVAALHQKRTLAFVNHFLTINVQFLNNFMRNCEQKLMQFERKLXKVNAAMVLLXSKL 435
DLTKV A+ QKRT+AF+N F+ VQFLN F CE+KL ++ ++ + +L +KL
Sbjct: 14 DLTKVPAIQQKRTVAFLNQFVVHTVQFLNRFSTVCEEKLADLSLRIQQIETTLNILDAKL 73
Query: 436 SSIPELD------IPKXXXXXXXXXXXXXXXXXXXXXXXXXXXRKLXXLAPPEMKT---K 588
SSIP LD P + ++ + T
Sbjct: 74 SSIPGLDDVTVEVSPLNVTSVTNGAHPEATSEQPQQNSTQDSGLQESEVSAENILTVAKD 133
Query: 589 PEYDKFVKMVQVGVPLQAVK 648
P Y +++KMVQVGVP+ A++
Sbjct: 134 PRYARYLKMVQVGVPVMAIR 153
>UniRef50_Q9CYF6 Cluster: 8 days embryo whole body cDNA, RIKEN
full-length enriched library, clone:5730495F03
product:RIKEN cDNA 5730495F03; n=15; Euteleostomi|Rep: 8
days embryo whole body cDNA, RIKEN full-length enriched
library, clone:5730495F03 product:RIKEN cDNA 5730495F03
- Mus musculus (Mouse)
Length = 178
Score = 69.7 bits (163), Expect = 6e-11
Identities = 32/67 (47%), Positives = 45/67 (67%)
Frame = +1
Query: 256 DLTKVAALHQKRTLAFVNHFLTINVQFLNNFMRNCEQKLMQFERKLXKVNAAMVLLXSKL 435
DLTKV A+ QKRT+AF+N F+ VQFLN F CE+KL ++ ++ + +L +KL
Sbjct: 13 DLTKVPAIQQKRTVAFLNQFVVHTVQFLNRFSAVCEEKLADLSLRIQQIETTLNILDAKL 72
Query: 436 SSIPELD 456
SSIP L+
Sbjct: 73 SSIPGLE 79
>UniRef50_UPI0000E46388 Cluster: PREDICTED: hypothetical protein,
partial; n=2; Strongylocentrotus purpuratus|Rep:
PREDICTED: hypothetical protein, partial -
Strongylocentrotus purpuratus
Length = 179
Score = 61.3 bits (142), Expect = 2e-08
Identities = 39/134 (29%), Positives = 58/134 (43%), Gaps = 7/134 (5%)
Frame = +1
Query: 268 VAALHQKRTLAFVNHFLTINVQFLNNFMRNCEQKLMQFERKLXKVNAAMVLLXSKLSSIP 447
V A+H KR LAF+NHF+ +FLN F CE KL ++ ++ + +L +KL+SIP
Sbjct: 1 VGAIHSKRMLAFLNHFIIHTTRFLNKFSCVCETKLSDITTRIQRLETTVNILEAKLASIP 60
Query: 448 ELDIPKXXXXXXXXXXXXXXXXXXXXXXXXXXXRKLXXLAPPE-------MKTKPEYDKF 606
L+ A PE + P Y K+
Sbjct: 61 GLENVTVETTPPPAAPEPSNLPALPSSEPADGSGIPAIEATPEPAPAVMTVSQDPRYIKY 120
Query: 607 VKMVQVGVPLQAVK 648
KM+ +GVP+ A+K
Sbjct: 121 FKMINMGVPVDALK 134
>UniRef50_A7RF75 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 207
Score = 57.2 bits (132), Expect = 3e-07
Identities = 30/70 (42%), Positives = 43/70 (61%)
Frame = +1
Query: 247 PQTDLTKVAALHQKRTLAFVNHFLTINVQFLNNFMRNCEQKLMQFERKLXKVNAAMVLLX 426
P D TKV+ L+ KRTLAF+NHF+T V+FLN F CE+ ++ V ++L
Sbjct: 11 PNVDYTKVSPLNHKRTLAFLNHFITHTVRFLNRFSCVCEEYKNHYDNSGGLVIGILIL-- 68
Query: 427 SKLSSIPELD 456
+L+SIP L+
Sbjct: 69 -QLASIPGLE 77
>UniRef50_Q55FU3 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 354
Score = 54.8 bits (126), Expect = 2e-06
Identities = 29/67 (43%), Positives = 37/67 (55%)
Frame = +1
Query: 256 DLTKVAALHQKRTLAFVNHFLTINVQFLNNFMRNCEQKLMQFERKLXKVNAAMVLLXSKL 435
D V ++ K+TLA+VN+F+ QFLN F CEQKL L K+ M LL KL
Sbjct: 6 DYRDVNSISNKKTLAYVNNFVINTTQFLNRFNYLCEQKLCDISNHLQKLEITMSLLEIKL 65
Query: 436 SSIPELD 456
SI L+
Sbjct: 66 GSIDGLE 72
>UniRef50_Q01LZ2 Cluster: OSIGBa0157N01.9 protein; n=2; Oryza
sativa|Rep: OSIGBa0157N01.9 protein - Oryza sativa
(Rice)
Length = 141
Score = 53.2 bits (122), Expect = 5e-06
Identities = 24/72 (33%), Positives = 42/72 (58%)
Frame = +1
Query: 235 QSESPQTDLTKVAALHQKRTLAFVNHFLTINVQFLNNFMRNCEQKLMQFERKLXKVNAAM 414
+ E + + + A+ +RT+ VN F+ V+FLN+F C KL RK+ K+++++
Sbjct: 33 EEEEEEEESARAIAVSDQRTIYLVNMFIANTVEFLNSFAAQCNDKLSLLHRKIVKLDSSL 92
Query: 415 VLLXSKLSSIPE 450
LL +KL SI +
Sbjct: 93 NLLEAKLRSIDD 104
>UniRef50_A0DD37 Cluster: Chromosome undetermined scaffold_46, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_46,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 200
Score = 48.0 bits (109), Expect = 2e-04
Identities = 22/64 (34%), Positives = 37/64 (57%)
Frame = +1
Query: 256 DLTKVAALHQKRTLAFVNHFLTINVQFLNNFMRNCEQKLMQFERKLXKVNAAMVLLXSKL 435
DL ++ + K T+A +N ++ N+ FLN F E KL + E L ++ + ++LL KL
Sbjct: 6 DLNQLEPIPYKNTIAVLNEYMLQNIDFLNKFGHFNENKLFEMEVVLDEIESKVLLLEKKL 65
Query: 436 SSIP 447
S+P
Sbjct: 66 ESVP 69
>UniRef50_Q7XL21 Cluster: OSJNBa0079M09.10 protein; n=3; Oryza
sativa|Rep: OSJNBa0079M09.10 protein - Oryza sativa
subsp. japonica (Rice)
Length = 168
Score = 44.0 bits (99), Expect = 0.003
Identities = 20/49 (40%), Positives = 31/49 (63%)
Frame = +1
Query: 304 VNHFLTINVQFLNNFMRNCEQKLMQFERKLXKVNAAMVLLXSKLSSIPE 450
VN F+ V+FLN+F C KL RK+ K+++++ LL +KL SI +
Sbjct: 83 VNMFIANTVEFLNSFAAQCNDKLSLLHRKIVKLDSSLNLLEAKLRSIDD 131
>UniRef50_A2F9Y4 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 214
Score = 43.6 bits (98), Expect = 0.004
Identities = 20/66 (30%), Positives = 33/66 (50%)
Frame = +1
Query: 256 DLTKVAALHQKRTLAFVNHFLTINVQFLNNFMRNCEQKLMQFERKLXKVNAAMVLLXSKL 435
D V ++ R +A +N F V FLN F C+ KL++ +++ + +L SKL
Sbjct: 19 DYRNVESIGHARIMASINQFTERTVDFLNRFSNICDMKLLEVSQRINNIEILTKILESKL 78
Query: 436 SSIPEL 453
S+ L
Sbjct: 79 ESVKGL 84
>UniRef50_Q4D5Y0 Cluster: Putative uncharacterized protein; n=3;
Trypanosoma|Rep: Putative uncharacterized protein -
Trypanosoma cruzi
Length = 251
Score = 43.2 bits (97), Expect = 0.006
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +1
Query: 289 RTLAFVNHFLTINVQFLNNFMRNCEQKLMQFERKLXKVNAAMVLLXSKLSSIPE 450
RT VN F+ QFLN F C+ +L++ R L ++ VLL +KL SI +
Sbjct: 12 RTADAVNKFIISTTQFLNRFAAQCDSQLIEICRSLQRLEILTVLLENKLKSIDD 65
>UniRef50_Q23G58 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 385
Score = 37.9 bits (84), Expect = 0.21
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 6/83 (7%)
Frame = +1
Query: 235 QSESPQTDLTKVAALHQKRTLAFVNHFLTINVQFLNNFMRNCEQKLMQFERKLXKVNAAM 414
Q E DL+++ + + +L VN F+ V F+N E + E+ L ++ +
Sbjct: 20 QQEQQGIDLSQLECIPIRCSLGVVNEFIINTVDFINRVGFRLENDQLSIEKLLEGIDQKL 79
Query: 415 VLLXSKLSSI-PEL-----DIPK 465
+LL KL S+ PE DIPK
Sbjct: 80 LLLEKKLDSVNPEFYNVLPDIPK 102
>UniRef50_Q4QDH5 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 295
Score = 36.7 bits (81), Expect = 0.49
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +1
Query: 304 VNHFLTINVQFLNNFMRNCEQKLMQFERKLXKVNAAMVLL 423
VN F+ VQFLN F CE +L+Q E L ++ LL
Sbjct: 36 VNRFVISTVQFLNRFSNECESRLVQTEESLQQLELQTQLL 75
>UniRef50_Q5C9Z4 Cluster: Nucleolar MIF4G domain-containing protein
1; n=21; Euteleostomi|Rep: Nucleolar MIF4G
domain-containing protein 1 - Homo sapiens (Human)
Length = 860
Score = 36.7 bits (81), Expect = 0.49
Identities = 24/76 (31%), Positives = 39/76 (51%)
Frame = +1
Query: 106 KEKDCYCKIISXTKQIQASKPQDKFLFRLVYILLKMTIQEDLTQSESPQTDLTKVAALHQ 285
K K I+ + + KP+ +FL +++ ILL T EDL+ + +D K+ L +
Sbjct: 756 KTKSLSLSILKVVEFSELDKPRVRFLRKVLSILLMETEVEDLSLIFTRVSDNPKLGVLRE 815
Query: 286 KRTLAFVNHFLTINVQ 333
L F++HFL N Q
Sbjct: 816 GLKL-FISHFLLKNAQ 830
>UniRef50_UPI0000D9AA5D Cluster: PREDICTED: similar to nucleolar
protein with MIF4G domain 1; n=1; Macaca mulatta|Rep:
PREDICTED: similar to nucleolar protein with MIF4G
domain 1 - Macaca mulatta
Length = 321
Score = 34.7 bits (76), Expect = 2.0
Identities = 24/76 (31%), Positives = 38/76 (50%)
Frame = +1
Query: 106 KEKDCYCKIISXTKQIQASKPQDKFLFRLVYILLKMTIQEDLTQSESPQTDLTKVAALHQ 285
K K I+ + + KP+ FL +++ ILL T EDL+ + +D K+ L +
Sbjct: 217 KTKSLSLSILKVVEFSELDKPRVHFLRKVLSILLMETEIEDLSLIFTRVSDNPKLGMLRE 276
Query: 286 KRTLAFVNHFLTINVQ 333
L F++HFL N Q
Sbjct: 277 GLKL-FISHFLLKNAQ 291
>UniRef50_O01901 Cluster: Daf-16-dependent longevity protein 1; n=2;
Caenorhabditis|Rep: Daf-16-dependent longevity protein 1
- Caenorhabditis elegans
Length = 189
Score = 34.7 bits (76), Expect = 2.0
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +1
Query: 247 PQTDLTKVAALHQKRTLAFVNHFLTINVQFLNNFMRNCEQKLMQFERKLXKVNAAMVLLX 426
P DL KV + RT N + + LNNF E L + E+ L + + L+
Sbjct: 9 PAIDLNKVPPIDHHRTAVTFNCLIMKMTEMLNNFGNKMEDILEKAEQSLDTADRKLRLME 68
Query: 427 SKLSSI 444
SKL+ +
Sbjct: 69 SKLAGM 74
>UniRef50_Q89A39 Cluster: Protein hflK; n=1; Buchnera aphidicola
(Baizongia pistaciae)|Rep: Protein hflK - Buchnera
aphidicola subsp. Baizongia pistaciae
Length = 417
Score = 32.7 bits (71), Expect = 7.9
Identities = 24/96 (25%), Positives = 44/96 (45%)
Frame = +1
Query: 115 DCYCKIISXTKQIQASKPQDKFLFRLVYILLKMTIQEDLTQSESPQTDLTKVAALHQKRT 294
DC KI S T+++ + + FLF L + LK LTQS S + +
Sbjct: 321 DCMEKIFSHTRKVLTNSDNNFFLFSLNDLFLKNN-YNSLTQSHSNSNKHSSMLNTVSSSH 379
Query: 295 LAFVNHFLTINVQFLNNFMRNCEQKLMQFERKLXKV 402
+ ++H + N+ +N + N ++KL F + ++
Sbjct: 380 VKSIDHVNSNNLLISSNNIIN-QRKLNSFRKDYLRI 414
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 484,079,994
Number of Sequences: 1657284
Number of extensions: 7662037
Number of successful extensions: 16408
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 16013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16405
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -