Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_E11
         (653 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0270 - 13675169-13675334,13676902-13676984,13677057-13677302     44   1e-04
04_03_0612 + 18023354-18023916,18024046-18024805                       27   9.9  

>04_03_0270 - 13675169-13675334,13676902-13676984,13677057-13677302
          Length = 164

 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 20/49 (40%), Positives = 31/49 (63%)
 Frame = +1

Query: 304 VNHFLTINVQFLNNFMRNCEQKLMQFERKLXKVNAAMVLLXSKLSSIPE 450
           VN F+   V+FLN+F   C  KL    RK+ K+++++ LL +KL SI +
Sbjct: 83  VNMFIANTVEFLNSFAAQCNDKLSLLHRKIVKLDSSLNLLEAKLRSIDD 131


>04_03_0612 + 18023354-18023916,18024046-18024805
          Length = 440

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +3

Query: 267 GCGITSKTYIGICKSFPN 320
           GCG+ ++ ++ +C  FPN
Sbjct: 46  GCGLATEDFLALCSRFPN 63


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,697,560
Number of Sequences: 37544
Number of extensions: 197627
Number of successful extensions: 347
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 347
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)