Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_E11
         (653 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC010889-1|AAH10889.1|  194|Homo sapiens coiled-coil domain cont...    77   4e-14
CR457171-1|CAG33452.1|  194|Homo sapiens CGI-116 protein.              77   6e-14
AK223339-1|BAD97059.1|  194|Homo sapiens CGI-116 protein variant...    77   6e-14
AF155655-1|AAF67012.1|  194|Homo sapiens protein x 0009 protein.       77   6e-14
AF151874-1|AAD34111.1|  194|Homo sapiens CGI-116 protein protein.      77   6e-14
BC007902-1|AAH07902.2|  295|Homo sapiens NOM1 protein protein.         37   0.072
AY576779-1|AAT39521.1|  860|Homo sapiens nucleolar protein with ...    37   0.072

>BC010889-1|AAH10889.1|  194|Homo sapiens coiled-coil domain
           containing 53 protein.
          Length = 194

 Score = 77.4 bits (182), Expect = 4e-14
 Identities = 46/140 (32%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
 Frame = +1

Query: 256 DLTKVAALHQKRTLAFVNHFLTINVQFLNNFMRNCEQKLMQFERKLXKVNAAMVLLXSKL 435
           DLTKV A+ QKRT+AF+N F+   VQFLN F   CE+KL     ++ ++   + +L +KL
Sbjct: 14  DLTKVPAIQQKRTVAFLNQFVVHTVQFLNRFSTVCEEKLADLSLRIQQIETTLNILDAKL 73

Query: 436 SSIPELD------IPKXXXXXXXXXXXXXXXXXXXXXXXXXXXRKLXXLAPPEMKT---K 588
           SSIP LD       P                             +   ++   + T    
Sbjct: 74  SSIPGLDDVTVEVSPLNVTSVTNGAHPEATSEQPQQSSTQDSGLQESEVSAENILTVAKD 133

Query: 589 PEYDKFVKMVQVGVPLQAVK 648
           P Y +++KMVQVGVP+ A++
Sbjct: 134 PRYARYLKMVQVGVPVMAIR 153


>CR457171-1|CAG33452.1|  194|Homo sapiens CGI-116 protein.
          Length = 194

 Score = 77.0 bits (181), Expect = 6e-14
 Identities = 46/140 (32%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
 Frame = +1

Query: 256 DLTKVAALHQKRTLAFVNHFLTINVQFLNNFMRNCEQKLMQFERKLXKVNAAMVLLXSKL 435
           DLTKV A+ QKRT+AF+N F+   VQFLN F   CE+KL     ++ ++   + +L +KL
Sbjct: 14  DLTKVPAIQQKRTVAFLNQFVVHTVQFLNRFSTVCEEKLADLSLRIQQIETTLNILDAKL 73

Query: 436 SSIPELD------IPKXXXXXXXXXXXXXXXXXXXXXXXXXXXRKLXXLAPPEMKT---K 588
           SSIP LD       P                             +   ++   + T    
Sbjct: 74  SSIPGLDDVTVEVSPLNVTSVTNGAHPEATSEQPQQNSTQDSGLQESEVSAENILTVAKD 133

Query: 589 PEYDKFVKMVQVGVPLQAVK 648
           P Y +++KMVQVGVP+ A++
Sbjct: 134 PRYARYLKMVQVGVPVMAIR 153


>AK223339-1|BAD97059.1|  194|Homo sapiens CGI-116 protein variant
           protein.
          Length = 194

 Score = 77.0 bits (181), Expect = 6e-14
 Identities = 46/140 (32%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
 Frame = +1

Query: 256 DLTKVAALHQKRTLAFVNHFLTINVQFLNNFMRNCEQKLMQFERKLXKVNAAMVLLXSKL 435
           DLTKV A+ QKRT+AF+N F+   VQFLN F   CE+KL     ++ ++   + +L +KL
Sbjct: 14  DLTKVPAIQQKRTVAFLNQFVVHTVQFLNRFSTVCEEKLADLSLRIQQIETTLNILDAKL 73

Query: 436 SSIPELD------IPKXXXXXXXXXXXXXXXXXXXXXXXXXXXRKLXXLAPPEMKT---K 588
           SSIP LD       P                             +   ++   + T    
Sbjct: 74  SSIPGLDGVTVEVSPLNVTSVTNGAHPEATSEQPQQNSTQDSGLQESEVSAENILTVAKD 133

Query: 589 PEYDKFVKMVQVGVPLQAVK 648
           P Y +++KMVQVGVP+ A++
Sbjct: 134 PRYARYLKMVQVGVPVMAIR 153


>AF155655-1|AAF67012.1|  194|Homo sapiens protein x 0009 protein.
          Length = 194

 Score = 77.0 bits (181), Expect = 6e-14
 Identities = 46/140 (32%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
 Frame = +1

Query: 256 DLTKVAALHQKRTLAFVNHFLTINVQFLNNFMRNCEQKLMQFERKLXKVNAAMVLLXSKL 435
           DLTKV A+ QKRT+AF+N F+   VQFLN F   CE+KL     ++ ++   + +L +KL
Sbjct: 14  DLTKVPAIQQKRTVAFLNQFVVHTVQFLNRFSTVCEEKLADLSLRIQQIETTLNILDAKL 73

Query: 436 SSIPELD------IPKXXXXXXXXXXXXXXXXXXXXXXXXXXXRKLXXLAPPEMKT---K 588
           SSIP LD       P                             +   ++   + T    
Sbjct: 74  SSIPGLDDVTVEVSPLNVTSVTNGAHPEATSEQPQQNSTQDSGLQESEVSAENILTVAKD 133

Query: 589 PEYDKFVKMVQVGVPLQAVK 648
           P Y +++KMVQVGVP+ A++
Sbjct: 134 PRYARYLKMVQVGVPVMAIR 153


>AF151874-1|AAD34111.1|  194|Homo sapiens CGI-116 protein protein.
          Length = 194

 Score = 77.0 bits (181), Expect = 6e-14
 Identities = 46/140 (32%), Positives = 68/140 (48%), Gaps = 9/140 (6%)
 Frame = +1

Query: 256 DLTKVAALHQKRTLAFVNHFLTINVQFLNNFMRNCEQKLMQFERKLXKVNAAMVLLXSKL 435
           DLTKV A+ QKRT+AF+N F+   VQFLN F   CE+KL     ++ ++   + +L +KL
Sbjct: 14  DLTKVPAIQQKRTVAFLNQFVVHTVQFLNRFSTVCEEKLADLSLRIQQIETTLNILDAKL 73

Query: 436 SSIPELD------IPKXXXXXXXXXXXXXXXXXXXXXXXXXXXRKLXXLAPPEMKT---K 588
           SSIP LD       P                             +   ++   + T    
Sbjct: 74  SSIPGLDDVTVEVSPLNVTSVTNGAHPEATSEQPQQNSTQDSGLQESEVSAENILTVAKD 133

Query: 589 PEYDKFVKMVQVGVPLQAVK 648
           P Y +++KMVQVGVP+ A++
Sbjct: 134 PRYARYLKMVQVGVPVMAIR 153


>BC007902-1|AAH07902.2|  295|Homo sapiens NOM1 protein protein.
          Length = 295

 Score = 36.7 bits (81), Expect = 0.072
 Identities = 24/76 (31%), Positives = 39/76 (51%)
 Frame = +1

Query: 106 KEKDCYCKIISXTKQIQASKPQDKFLFRLVYILLKMTIQEDLTQSESPQTDLTKVAALHQ 285
           K K     I+   +  +  KP+ +FL +++ ILL  T  EDL+   +  +D  K+  L +
Sbjct: 191 KTKSLSLSILKVVEFSELDKPRVRFLRKVLSILLMETEVEDLSLIFTRVSDNPKLGVLRE 250

Query: 286 KRTLAFVNHFLTINVQ 333
              L F++HFL  N Q
Sbjct: 251 GLKL-FISHFLLKNAQ 265


>AY576779-1|AAT39521.1|  860|Homo sapiens nucleolar protein with
           MIF4G domain 1 protein.
          Length = 860

 Score = 36.7 bits (81), Expect = 0.072
 Identities = 24/76 (31%), Positives = 39/76 (51%)
 Frame = +1

Query: 106 KEKDCYCKIISXTKQIQASKPQDKFLFRLVYILLKMTIQEDLTQSESPQTDLTKVAALHQ 285
           K K     I+   +  +  KP+ +FL +++ ILL  T  EDL+   +  +D  K+  L +
Sbjct: 756 KTKSLSLSILKVVEFSELDKPRVRFLRKVLSILLMETEVEDLSLIFTRVSDNPKLGVLRE 815

Query: 286 KRTLAFVNHFLTINVQ 333
              L F++HFL  N Q
Sbjct: 816 GLKL-FISHFLLKNAQ 830


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,655,990
Number of Sequences: 237096
Number of extensions: 1111911
Number of successful extensions: 1810
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1810
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)