Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_E11
         (653 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071457-1|AAL49079.1|  176|Drosophila melanogaster RE53816p pro...    78   1e-14
AE014134-1387|AAF52595.2|  176|Drosophila melanogaster CG7429-PA...    78   1e-14

>AY071457-1|AAL49079.1|  176|Drosophila melanogaster RE53816p
           protein.
          Length = 176

 Score = 77.8 bits (183), Expect = 1e-14
 Identities = 52/149 (34%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
 Frame = +1

Query: 226 DLTQSESPQTDLTKVAALHQKRTLAFVNHFLTINVQFLNNFMRNCEQKLMQFERKLXKVN 405
           D T + +   D T++  L+QKR LAFVNHFL     FLN F   CE K ++ ER+L K  
Sbjct: 2   DATAAITGNVDKTQIPPLNQKRILAFVNHFLVSTCTFLNEFALGCETKFVEMERQLQKTE 61

Query: 406 AAMVLLXSKLSSIP---ELDIPKXXXXXXXXXXXXXXXXXXXXXXXXXXXRKLXXLAPPE 576
           AA+++L +KL+SIP    +                                      PPE
Sbjct: 62  AALIILEAKLASIPTEHHVATEATEAPAISNQQRNEEASMVDTTEPPTTENPTEPELPPE 121

Query: 577 MK-----TKPEYDKFVKMVQVGVPLQAVK 648
                      Y KF KMVQVGVP  AVK
Sbjct: 122 SVGVRACEDQRYRKFFKMVQVGVPAPAVK 150


>AE014134-1387|AAF52595.2|  176|Drosophila melanogaster CG7429-PA
           protein.
          Length = 176

 Score = 77.8 bits (183), Expect = 1e-14
 Identities = 52/149 (34%), Positives = 66/149 (44%), Gaps = 8/149 (5%)
 Frame = +1

Query: 226 DLTQSESPQTDLTKVAALHQKRTLAFVNHFLTINVQFLNNFMRNCEQKLMQFERKLXKVN 405
           D T + +   D T++  L+QKR LAFVNHFL     FLN F   CE K ++ ER+L K  
Sbjct: 2   DATAAITGNVDKTQIPPLNQKRILAFVNHFLVSTCTFLNEFALGCETKFVEMERQLQKTE 61

Query: 406 AAMVLLXSKLSSIP---ELDIPKXXXXXXXXXXXXXXXXXXXXXXXXXXXRKLXXLAPPE 576
           AA+++L +KL+SIP    +                                      PPE
Sbjct: 62  AALIILEAKLASIPTEHHVATEATEAPAISNQQRNEEASMVDTTEPPTTENPTEPELPPE 121

Query: 577 MK-----TKPEYDKFVKMVQVGVPLQAVK 648
                      Y KF KMVQVGVP  AVK
Sbjct: 122 SVGVRACEDQRYRKFFKMVQVGVPAPAVK 150


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,962,680
Number of Sequences: 53049
Number of extensions: 361921
Number of successful extensions: 743
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 743
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)