Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_E10
(474 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63; Eukary... 171 7e-42
UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105; Eukar... 152 3e-36
UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S riboso... 128 5e-29
UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365... 125 6e-28
UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S riboso... 122 5e-27
UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal ... 116 4e-25
UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative, ... 109 3e-23
UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S riboso... 108 7e-23
UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, who... 89 5e-17
UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=... 77 2e-13
UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein sim... 72 8e-12
UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1; Encepha... 69 5e-11
UniRef50_A7AM97 Cluster: 40S ribosomal protein S17, putative; n=... 68 9e-11
UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome sh... 55 9e-07
UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Re... 52 6e-06
UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellu... 51 2e-05
UniRef50_UPI0000DD7D3B Cluster: PREDICTED: similar to 40S riboso... 44 0.002
UniRef50_O26894 Cluster: 30S ribosomal protein S17e; n=2; Methan... 42 0.005
UniRef50_Q8TUZ3 Cluster: 30S ribosomal protein S17e; n=6; Archae... 41 0.016
UniRef50_A1RX28 Cluster: Ribosomal protein S17e; n=1; Thermofilu... 40 0.028
UniRef50_A2BK33 Cluster: 30S ribosomal protein S17e; n=2; Desulf... 38 0.11
UniRef50_UPI00015531AB Cluster: PREDICTED: similar to OTTHUMP000... 37 0.26
UniRef50_O29351 Cluster: 30S ribosomal protein S17e; n=5; Archae... 36 0.60
UniRef50_A2SST9 Cluster: Ribosomal protein S17E-like protein; n=... 35 0.80
UniRef50_A7DPB3 Cluster: Ribosomal protein S17e; n=1; Candidatus... 35 1.1
UniRef50_Q9YA67 Cluster: 30S ribosomal protein S17e; n=2; Thermo... 35 1.1
UniRef50_Q0W674 Cluster: 30s ribosomal protein S17E; n=2; Archae... 33 3.2
UniRef50_Q5V5R5 Cluster: 30S ribosomal protein S17e; n=2; Archae... 33 3.2
UniRef50_Q8PXL8 Cluster: 30S ribosomal protein S17e; n=8; Euryar... 33 4.3
UniRef50_Q64BW7 Cluster: Ribosomal protein S17E; n=1; uncultured... 32 5.6
UniRef50_Q5V546 Cluster: Sensor protein; n=1; Haloarcula marismo... 32 7.4
UniRef50_A2UAG4 Cluster: Metal dependent phosphohydrolase; n=2; ... 31 9.8
UniRef50_Q95YE6 Cluster: Ligase protein 4; n=2; Caenorhabditis|R... 31 9.8
>UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63;
Eukaryota|Rep: 40S ribosomal protein S17 - Drosophila
melanogaster (Fruit fly)
Length = 131
Score = 171 bits (416), Expect = 7e-42
Identities = 82/99 (82%), Positives = 87/99 (87%)
Frame = +1
Query: 133 LHFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLXEXERERRDNYV 312
L F TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGISIKL E ERERRDNYV
Sbjct: 26 LDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEEERERRDNYV 85
Query: 313 PEVSALEHDIIEVDPDTNDMLKMLDFNNINGLQLTQPAT 429
P VSALE DIIEVD DT +MLK+LDF+NI GLQLTQP T
Sbjct: 86 PAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNT 124
Score = 45.6 bits (103), Expect = 6e-04
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = +3
Query: 69 RTKTVKKAAXIIIEKYYTRLTLAF 140
RTKTVKKAA +IIEKYYTRLTL F
Sbjct: 5 RTKTVKKAAKVIIEKYYTRLTLDF 28
>UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105;
Eukaryota|Rep: 40S ribosomal protein S17 - Homo sapiens
(Human)
Length = 135
Score = 152 bits (369), Expect = 3e-36
Identities = 69/95 (72%), Positives = 83/95 (87%)
Frame = +1
Query: 139 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLXEXERERRDNYVPE 318
F TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKL E ERERRDNYVPE
Sbjct: 28 FHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPE 87
Query: 319 VSALEHDIIEVDPDTNDMLKMLDFNNINGLQLTQP 423
VSAL+ +IIEVDPDT +MLK+LDF +++ LQ+TQP
Sbjct: 88 VSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
Score = 40.3 bits (90), Expect = 0.021
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +3
Query: 69 RTKTVKKAAXIIIEKYYTRL 128
RTKTVKKAA +IIEKYYTRL
Sbjct: 5 RTKTVKKAARVIIEKYYTRL 24
>UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Rattus norvegicus
Length = 190
Score = 128 bits (310), Expect = 5e-29
Identities = 60/95 (63%), Positives = 72/95 (75%)
Frame = +1
Query: 139 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLXEXERERRDNYVPE 318
F TNK +CEEIAIIP++ LRNKI + THLM+R++ VRGISIKL E ERERRDNYVPE
Sbjct: 83 FHTNKHVCEEIAIIPSENLRNKITSYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPE 142
Query: 319 VSALEHDIIEVDPDTNDMLKMLDFNNINGLQLTQP 423
SAL+ +IIEVDPDT ML + F ++ Q TQP
Sbjct: 143 GSALDQEIIEVDPDTKKMLNLPGFGRLSNFQDTQP 177
>UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365;
n=3; Homo/Pan/Gorilla group|Rep: Uncharacterized protein
ENSP00000351365 - Homo sapiens (Human)
Length = 135
Score = 125 bits (301), Expect = 6e-28
Identities = 58/98 (59%), Positives = 76/98 (77%)
Frame = +1
Query: 139 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLXEXERERRDNYVPE 318
F TNK +CE IAII +K LRNKI G+ HLM+R+R VRGISIKL E ERE RDNYVPE
Sbjct: 29 FYTNKCVCE-IAIILSKKLRNKIVGYVKHLMKRIRKGPVRGISIKLQEEERENRDNYVPE 87
Query: 319 VSALEHDIIEVDPDTNDMLKMLDFNNINGLQLTQPATQ 432
+S L+ + +EVDPDT +ML++LDF +++ LQ+T+P +
Sbjct: 88 ISVLDQETVEVDPDTKEMLELLDFVSLSNLQVTRPTVE 125
>UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Macaca mulatta
Length = 189
Score = 122 bits (293), Expect = 5e-27
Identities = 56/96 (58%), Positives = 74/96 (77%)
Frame = +1
Query: 136 HFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLXEXERERRDNYVP 315
+F +NKR CEE II +K L NKI G+ HLM+R++ VRGISIKL E ERER+DNYVP
Sbjct: 81 NFCSNKRACEETTIILSKKLCNKIVGYVMHLMKRIQKDPVRGISIKLQEKERERKDNYVP 140
Query: 316 EVSALEHDIIEVDPDTNDMLKMLDFNNINGLQLTQP 423
E+SA + + IEVDPDT +M K+L+F +++ LQ+TQP
Sbjct: 141 EISATDQETIEVDPDTKEMRKVLNFVSLSNLQVTQP 176
>UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal
protein S17; n=8; Eutheria|Rep: PREDICTED: similar to
ribosomal protein S17 - Mus musculus
Length = 228
Score = 116 bits (278), Expect = 4e-25
Identities = 53/95 (55%), Positives = 74/95 (77%)
Frame = +1
Query: 139 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLXEXERERRDNYVPE 318
F T+K +CEEI I+P+K L++KIAG+ THL ++++ VRGISIKL E ERR +Y+PE
Sbjct: 65 FYTDKHVCEEITIVPSKKLQSKIAGYVTHLTKQIQRGPVRGISIKL--QEEERRADYIPE 122
Query: 319 VSALEHDIIEVDPDTNDMLKMLDFNNINGLQLTQP 423
VSAL+ +I EVDP T +MLK+LD +++ LQ+TQP
Sbjct: 123 VSALDQEITEVDPATKEMLKLLDLGSLSNLQVTQP 157
>UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative,
expressed; n=7; Eukaryota|Rep: 40S ribosomal protein
S17-4, putative, expressed - Oryza sativa subsp.
japonica (Rice)
Length = 141
Score = 109 bits (262), Expect = 3e-23
Identities = 52/96 (54%), Positives = 71/96 (73%)
Frame = +1
Query: 133 LHFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLXEXERERRDNYV 312
L F TNK++ EE++I+P+K LRNK+AGF THLMRR++ VRGIS+KL E ERERR ++V
Sbjct: 26 LDFHTNKKVLEEVSILPSKRLRNKVAGFTTHLMRRIQRGPVRGISLKLQEEERERRMDFV 85
Query: 313 PEVSALEHDIIEVDPDTNDMLKMLDFNNINGLQLTQ 420
PE SALE + I VD +T +ML L ++ G++ Q
Sbjct: 86 PEKSALEVEEIRVDKETMEMLAALGMADLPGVERQQ 121
Score = 37.5 bits (83), Expect = 0.15
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +3
Query: 69 RTKTVKKAAXIIIEKYYTRLTLAF 140
RTKTVKK + +IEKYY+R+TL F
Sbjct: 5 RTKTVKKTSRQVIEKYYSRMTLDF 28
>UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Canis familiaris
Length = 177
Score = 108 bits (259), Expect = 7e-23
Identities = 54/97 (55%), Positives = 72/97 (74%), Gaps = 1/97 (1%)
Frame = +1
Query: 136 HFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQV-RGISIKLXEXERERRDNYV 312
HF TNKR+CE+IAI P+K LRN IAG+ HL +R++ V RG ER +++ YV
Sbjct: 76 HFHTNKRVCEDIAISPSKKLRNGIAGYVAHLTKRIQQGPVARG-------GER-KKETYV 127
Query: 313 PEVSALEHDIIEVDPDTNDMLKMLDFNNINGLQLTQP 423
PEVSAL+ +IIEVDPDT +MLK+LDF +++ LQ+TQP
Sbjct: 128 PEVSALDQEIIEVDPDTQEMLKLLDFGSLSNLQVTQP 164
>UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_9,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 178
Score = 89.0 bits (211), Expect = 5e-17
Identities = 41/80 (51%), Positives = 58/80 (72%)
Frame = +1
Query: 139 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLXEXERERRDNYVPE 318
F NK+I E+ +P+K LRNKIAGFATHL++R++ V+GIS+K+ E ERERR +YVPE
Sbjct: 68 FHFNKKILSEVGQVPSKKLRNKIAGFATHLLKRIQTGSVKGISLKIQEEERERRLDYVPE 127
Query: 319 VSALEHDIIEVDPDTNDMLK 378
S+++ D + D D ML+
Sbjct: 128 KSSVDIDNLRGDQDVKRMLE 147
Score = 31.5 bits (68), Expect = 9.8
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 45 QLQPWVVSRTKTVKKAAXIIIEKYYTRLTLAF 140
Q+ W + +KAA ++IEKYY +LT F
Sbjct: 37 QIHSWEELEIRQQRKAAKVLIEKYYMKLTSDF 68
>UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=6;
Trypanosomatidae|Rep: 40S ribosomal protein S17,
putative - Leishmania major
Length = 143
Score = 77.0 bits (181), Expect = 2e-13
Identities = 41/90 (45%), Positives = 58/90 (64%), Gaps = 5/90 (5%)
Frame = +1
Query: 133 LHFD--TNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLXEXERERRDN 306
L+FD NKR+ ++ I +K L+NKIAG+ TH+M+RL VRGIS+KL E ERERR +
Sbjct: 24 LNFDFYQNKRVIMDVTIAESKKLKNKIAGYTTHIMKRLARGPVRGISLKLQEEERERRMD 83
Query: 307 YVPEVSALEHDI---IEVDPDTNDMLKMLD 387
+ P S ++ I + VD T ML+ L+
Sbjct: 84 HAPATSDVDKVIQSGVSVDKKTMQMLQRLE 113
Score = 33.5 bits (73), Expect = 2.4
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +3
Query: 69 RTKTVKKAAXIIIEKYYTRLTLAF 140
RTKTVK+A+ ++EKYY++L F
Sbjct: 5 RTKTVKRASRQVVEKYYSKLNFDF 28
>UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)); n=2;
Eutheria|Rep: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)) - Homo
sapiens (Human)
Length = 121
Score = 71.7 bits (168), Expect = 8e-12
Identities = 36/88 (40%), Positives = 54/88 (61%)
Frame = +1
Query: 139 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLXEXERERRDNYVPE 318
F +K +C+EI I ++ L +KIAG+ THLM+ +R S + +S R R NYVPE
Sbjct: 28 FYMSKYVCKEITITSSRELCSKIAGYVTHLMKEIRGSDSQ-VSPSSCRRRRRDRSNYVPE 86
Query: 319 VSALEHDIIEVDPDTNDMLKMLDFNNIN 402
S L+ +I EVD T +MLK+ F +++
Sbjct: 87 GSVLDQEITEVDAGTKEMLKLPGFGSVS 114
>UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S17
- Encephalitozoon cuniculi
Length = 120
Score = 68.9 bits (161), Expect = 5e-11
Identities = 30/80 (37%), Positives = 52/80 (65%)
Frame = +1
Query: 139 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLXEXERERRDNYVPE 318
FD N + +++A++ +K L+N+IAG+ T L +++ + IK E ERER++N +P+
Sbjct: 28 FDHNLLVVQDVAVVQSKKLKNEIAGYLTSLYKKILKGTYNKVYIKSHEEERERKENVIPK 87
Query: 319 VSALEHDIIEVDPDTNDMLK 378
S L+ D +EVD T +M+K
Sbjct: 88 ESMLDVDCVEVDDVTMEMIK 107
>UniRef50_A7AM97 Cluster: 40S ribosomal protein S17, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S17, putative -
Babesia bovis
Length = 145
Score = 68.1 bits (159), Expect = 9e-11
Identities = 33/60 (55%), Positives = 42/60 (70%)
Frame = +1
Query: 214 FATHLMRRLRHSQVRGISIKLXEXERERRDNYVPEVSALEHDIIEVDPDTNDMLKMLDFN 393
F HLMRR++ VRGIS+KL E ERERR ++VPE S ++ +I+VD DT DML L N
Sbjct: 66 FIIHLMRRIQKGPVRGISLKLQEEERERRMDFVPERSEVDVPLIQVDQDTADMLTFLKLN 125
>UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome
shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
Chromosome 13 SCAF7124, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 372
Score = 54.8 bits (126), Expect = 9e-07
Identities = 22/36 (61%), Positives = 32/36 (88%)
Frame = +1
Query: 316 EVSALEHDIIEVDPDTNDMLKMLDFNNINGLQLTQP 423
+VSAL+ ++IEVDPDT +MLK+LDF +++ LQ+TQP
Sbjct: 326 QVSALDQELIEVDPDTKEMLKLLDFGSLSNLQVTQP 361
>UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Rep:
RpS17 protein - Guillardia theta (Cryptomonas phi)
Length = 118
Score = 52.0 bits (119), Expect = 6e-06
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 2/92 (2%)
Frame = +1
Query: 133 LHFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGI--SIKLXEXERERRDN 306
+ F NK C+EIA+I +K LRNKIAG+ THL++ + + I +IK E +
Sbjct: 26 IDFQENKFFCDEIALITSKSLRNKIAGYVTHLIKEFFKGKKKKIYTNIKFDINNIEINNK 85
Query: 307 YVPEVSALEHDIIEVDPDTNDMLKMLDFNNIN 402
S E + VD +T M+K L F N N
Sbjct: 86 ESEVFSNTELKLNLVDDETKQMIKKL-FPNKN 116
>UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellular
organisms|Rep: 30S ribosomal protein S17e -
Methanococcus jannaschii
Length = 62
Score = 50.8 bits (116), Expect = 2e-05
Identities = 22/35 (62%), Positives = 29/35 (82%)
Frame = +1
Query: 139 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLR 243
F+TNKR+ EE+A I TK LRN+IAG+ TH MR+L+
Sbjct: 28 FETNKRVLEEVAQISTKRLRNRIAGYITHKMRQLQ 62
>UniRef50_UPI0000DD7D3B Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Homo sapiens|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Homo sapiens
Length = 53
Score = 44.0 bits (99), Expect = 0.002
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +1
Query: 136 HFDTNKRICEEIAIIPTKPLRNKIAGFATH 225
+F NKR+C+EIAIIP+K LRNK AG H
Sbjct: 21 NFHRNKRVCKEIAIIPSKKLRNKKAGLLWH 50
>UniRef50_O26894 Cluster: 30S ribosomal protein S17e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S17e -
Methanobacterium thermoautotrophicum
Length = 62
Score = 42.3 bits (95), Expect = 0.005
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = +1
Query: 139 FDTNKRICEEIAIIPTKPLRNKIAGFATHLM 231
FDTNK++ EE + + TK LRNKIAG+ T ++
Sbjct: 28 FDTNKKLVEEFSTVSTKHLRNKIAGYITRII 58
>UniRef50_Q8TUZ3 Cluster: 30S ribosomal protein S17e; n=6;
Archaea|Rep: 30S ribosomal protein S17e - Methanopyrus
kandleri
Length = 70
Score = 40.7 bits (91), Expect = 0.016
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = +1
Query: 139 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRG 261
F+ NK++ E +A TK LRN IAG+ THLMR + G
Sbjct: 28 FEHNKKVVEIVARPKTKKLRNMIAGYVTHLMRLKERQREEG 68
>UniRef50_A1RX28 Cluster: Ribosomal protein S17e; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S17e - Thermofilum
pendens (strain Hrk 5)
Length = 95
Score = 39.9 bits (89), Expect = 0.028
Identities = 18/33 (54%), Positives = 25/33 (75%)
Frame = +1
Query: 139 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 237
F+ NK+ EIA IP++ LRN+IAG+ T L+RR
Sbjct: 28 FELNKKKLMEIADIPSRQLRNQIAGYITRLVRR 60
>UniRef50_A2BK33 Cluster: 30S ribosomal protein S17e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S17e -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 103
Score = 37.9 bits (84), Expect = 0.11
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +1
Query: 139 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMR 234
F+ NKRI ++ P+K LRN+IAG+ T L+R
Sbjct: 28 FEHNKRIVSQLIETPSKKLRNQIAGYVTRLIR 59
>UniRef50_UPI00015531AB Cluster: PREDICTED: similar to
OTTHUMP00000016594; n=1; Mus musculus|Rep: PREDICTED:
similar to OTTHUMP00000016594 - Mus musculus
Length = 128
Score = 36.7 bits (81), Expect = 0.26
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +1
Query: 151 KRICEEIAIIPTKPLRNKIAGFATHLMRRL-RHSQVRGISIKLXEXERERRDNYVPEVSA 327
K +C+EI I P+K L KIAGF LM+++ R+ +++ +S L ER +D V
Sbjct: 49 KDLCKEIIIFPSKKL-YKIAGFVMRLMKQIQRNYKLQELSSSLA-AERISKDIVCQNVGF 106
Query: 328 LEHDIIEVDP 357
L+ +++ +P
Sbjct: 107 LQINMLMSEP 116
>UniRef50_O29351 Cluster: 30S ribosomal protein S17e; n=5;
Archaea|Rep: 30S ribosomal protein S17e - Archaeoglobus
fulgidus
Length = 65
Score = 35.5 bits (78), Expect = 0.60
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +1
Query: 136 HFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 237
+FD NKR+ E+ I +K +RN++AG+ T + R
Sbjct: 27 NFDENKRLVAELTNIQSKTVRNRVAGYITRRVNR 60
>UniRef50_A2SST9 Cluster: Ribosomal protein S17E-like protein; n=4;
Methanomicrobiales|Rep: Ribosomal protein S17E-like
protein - Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z)
Length = 64
Score = 35.1 bits (77), Expect = 0.80
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1
Query: 136 HFDTNKRICEEIAIIPTKPLRNKIAGFAT 222
+FD NK++ EI I +K +RN++AG+ T
Sbjct: 26 NFDDNKKVVAEITTIESKMIRNRVAGYVT 54
>UniRef50_A7DPB3 Cluster: Ribosomal protein S17e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S17e - Candidatus Nitrosopumilus maritimus SCM1
Length = 129
Score = 34.7 bits (76), Expect = 1.1
Identities = 13/33 (39%), Positives = 25/33 (75%)
Frame = +1
Query: 139 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 237
F NK+I E++I+ +K L+N+IAG+ T+ +++
Sbjct: 23 FADNKKILNEVSIVRSKGLKNEIAGYITNYIKK 55
>UniRef50_Q9YA67 Cluster: 30S ribosomal protein S17e; n=2;
Thermoprotei|Rep: 30S ribosomal protein S17e - Aeropyrum
pernix
Length = 74
Score = 34.7 bits (76), Expect = 1.1
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +1
Query: 139 FDTNKRICEEIAIIPTKPLRNKIAGFATHLM 231
F+ NKR+ ++ +K LRN+IAG+ THL+
Sbjct: 28 FEHNKRVVSQLIEYRSKKLRNQIAGYITHLV 58
>UniRef50_Q0W674 Cluster: 30s ribosomal protein S17E; n=2;
Archaea|Rep: 30s ribosomal protein S17E - Uncultured
methanogenic archaeon RC-I
Length = 65
Score = 33.1 bits (72), Expect = 3.2
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 139 FDTNKRICEEIAIIPTKPLRNKIAGFATHLM 231
F NK E++A + TK +RN+IAG+ T M
Sbjct: 28 FTANKAKVEQLASVQTKEVRNRIAGYVTRKM 58
>UniRef50_Q5V5R5 Cluster: 30S ribosomal protein S17e; n=2;
Archaea|Rep: 30S ribosomal protein S17e - Haloarcula
marismortui (Halobacterium marismortui)
Length = 63
Score = 33.1 bits (72), Expect = 3.2
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +1
Query: 139 FDTNKRICEEIAIIPTKPLRNKIAGFATHLM 231
F+ NK + EE+ I +K +RN+IAG+ T M
Sbjct: 27 FEHNKDVVEELTNIESKGVRNRIAGYVTRKM 57
>UniRef50_Q8PXL8 Cluster: 30S ribosomal protein S17e; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S17e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 64
Score = 32.7 bits (71), Expect = 4.3
Identities = 12/35 (34%), Positives = 23/35 (65%)
Frame = +1
Query: 139 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLR 243
F+TNK + + I +K +RN++AG+ T + R++
Sbjct: 28 FETNKALVTKYTTIESKIIRNRVAGYVTRKVARMK 62
>UniRef50_Q64BW7 Cluster: Ribosomal protein S17E; n=1; uncultured
archaeon GZfos26F9|Rep: Ribosomal protein S17E -
uncultured archaeon GZfos26F9
Length = 76
Score = 32.3 bits (70), Expect = 5.6
Identities = 11/29 (37%), Positives = 21/29 (72%)
Frame = +1
Query: 139 FDTNKRICEEIAIIPTKPLRNKIAGFATH 225
F+ NK++ ++ + +K +RN+IAG+ TH
Sbjct: 27 FELNKKLVDKYTNVESKDVRNRIAGYITH 55
>UniRef50_Q5V546 Cluster: Sensor protein; n=1; Haloarcula
marismortui|Rep: Sensor protein - Haloarcula marismortui
(Halobacterium marismortui)
Length = 450
Score = 31.9 bits (69), Expect = 7.4
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = -1
Query: 297 PLTLLFXKFDRDSSHLRVSETP--H*MCGKSSNFIPKRLGRNDSD 169
P T+L F+R+S HL V +T + + SS P+ LGR D D
Sbjct: 127 PETILATMFERNSEHLYVKDTDRHYLLLNDSSYAPPELLGRRDED 171
>UniRef50_A2UAG4 Cluster: Metal dependent phosphohydrolase; n=2;
Bacillus|Rep: Metal dependent phosphohydrolase -
Bacillus coagulans 36D1
Length = 216
Score = 31.5 bits (68), Expect = 9.8
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +1
Query: 250 QVRGISIKLXEXERERRDNYVPEVSALEHDIIEV 351
+VRG+++ + E E E+ D ++ E SAL HDI +V
Sbjct: 32 RVRGLALYIAEKE-EKGDRFIIEASALLHDIPDV 64
>UniRef50_Q95YE6 Cluster: Ligase protein 4; n=2; Caenorhabditis|Rep:
Ligase protein 4 - Caenorhabditis elegans
Length = 741
Score = 31.5 bits (68), Expect = 9.8
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = +2
Query: 188 SLLGIKLLDLPHI**GVSDT--RKCEESLSNFXXRSVRGVTTMSQKCL 325
SL GI++ L G S+T RKCEE L +F V+G+T ++ C+
Sbjct: 641 SLTGIEVAVLQ----GTSETIRRKCEEILKHFDATVVKGITPSTKLCI 684
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 428,954,691
Number of Sequences: 1657284
Number of extensions: 7622113
Number of successful extensions: 18878
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 18534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18873
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26450695845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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