Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_E10
         (474 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    25   0.36 
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    25   0.36 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   2.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   4.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   4.4  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   7.7  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 25.0 bits (52), Expect = 0.36
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -1

Query: 189 LGRNDSDFFTYSFICIKMQVLILYSIFQ 106
           L ++ SD+F +SF      +L +YS+F+
Sbjct: 48  LKQHKSDYFYFSFYITSYTLLSVYSLFR 75


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 25.0 bits (52), Expect = 0.36
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -1

Query: 189 LGRNDSDFFTYSFICIKMQVLILYSIFQ 106
           L ++ SD+F +SF      +L +YS+F+
Sbjct: 48  LKQHKSDYFYFSFYITSYTLLSVYSLFR 75


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +1

Query: 133  LHFDTNKRICE 165
            LH+D NK IC+
Sbjct: 1311 LHWDNNKNICD 1321


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -2

Query: 248 ECLRRLIKCVANPAILFLRGLVGMIAISSHILLFV 144
           +CL +L K  +    L L G     AI S IL+FV
Sbjct: 143 KCLYKLWKMPSLSEFLSLFGTETCPAIGSAILIFV 177


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -2

Query: 248 ECLRRLIKCVANPAILFLRGLVGMIAISSHILLFV 144
           +CL +L K  +    L L G     AI S IL+FV
Sbjct: 143 KCLYKLWKMPSLSEFLSLFGTETCPAIGSAILIFV 177


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 8/33 (24%), Positives = 17/33 (51%)
 Frame = +2

Query: 113 ILYKINTCILIQIKEYVKKSLSFLPSLLGIKLL 211
           + +  N   L+Q K+YV++       L+ + +L
Sbjct: 132 VAFNTNIISLVQNKDYVERDTDIRRFLIKVTIL 164


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,244
Number of Sequences: 336
Number of extensions: 2014
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11036865
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)