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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_E08
         (417 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q59FI9 Cluster: Ribosomal protein L12 variant; n=56; Fu...   140   1e-32
UniRef50_P30050 Cluster: 60S ribosomal protein L12; n=158; Eukar...   140   1e-32
UniRef50_Q4V5X9 Cluster: IP07888p; n=8; Eukaryota|Rep: IP07888p ...   138   3e-32
UniRef50_Q01BX3 Cluster: Putative 60S ribosomal protein L12; n=1...   117   8e-26
UniRef50_Q6DI58 Cluster: Rpl12 protein; n=1; Mus musculus|Rep: R...   113   1e-24
UniRef50_Q38D53 Cluster: 60S ribosomal protein L12, putative; n=...   107   7e-23
UniRef50_Q0CUU2 Cluster: 60S ribosomal protein L12; n=1; Aspergi...   104   8e-22
UniRef50_A0BE24 Cluster: Chromosome undetermined scaffold_101, w...    98   7e-20
UniRef50_Q4Y4I9 Cluster: 60S ribosomal protein L12, putative; n=...    97   1e-19
UniRef50_P87267 Cluster: Putative uncharacterized protein YDR417...    87   1e-16
UniRef50_Q4YLV7 Cluster: Putative uncharacterized protein; n=1; ...    83   3e-15
UniRef50_Q7QQ98 Cluster: GLP_243_12971_12423; n=1; Giardia lambl...    75   6e-13
UniRef50_UPI0001560E03 Cluster: PREDICTED: hypothetical protein;...    72   6e-12
UniRef50_Q8SR84 Cluster: 60S ribosomal protein L12; n=4; Eukaryo...    69   4e-11
UniRef50_A7TCB3 Cluster: Predicted protein; n=1; Nematostella ve...    67   2e-10
UniRef50_Q3LW80 Cluster: Ribosomal protein L2; n=1; Bigelowiella...    66   3e-10
UniRef50_Q6CYA6 Cluster: Similarity; n=1; Kluyveromyces lactis|R...    66   4e-10
UniRef50_UPI0000D9D615 Cluster: PREDICTED: similar to 60S riboso...    62   3e-09
UniRef50_A2AB20 Cluster: Kinesin family member C1; n=3; Catarrhi...    50   2e-05
UniRef50_P54030 Cluster: 50S ribosomal protein L11P; n=16; Archa...    41   0.012
UniRef50_P62445 Cluster: 50S ribosomal protein L11P; n=9; Archae...    38   0.063
UniRef50_Q97BN1 Cluster: 50S ribosomal protein L11P; n=4; Euryar...    36   0.44 
UniRef50_A0FZB1 Cluster: Putative uncharacterized protein; n=2; ...    33   1.8  
UniRef50_Q5CXY0 Cluster: Signal peptide-containing protein with ...    31   7.2  
UniRef50_A6PLT7 Cluster: Regulatory protein GntR, HTH; n=1; Vict...    31   9.6  

>UniRef50_Q59FI9 Cluster: Ribosomal protein L12 variant; n=56;
           Fungi/Metazoa group|Rep: Ribosomal protein L12 variant -
           Homo sapiens (Human)
          Length = 197

 Score =  140 bits (338), Expect = 1e-32
 Identities = 64/74 (86%), Positives = 69/74 (93%)
 Frame = +3

Query: 132 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITV 311
           MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIA AT DWKGL+ITV
Sbjct: 33  MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 92

Query: 312 QLTVQNRQAQIAVV 353
           +LT+QNRQAQI VV
Sbjct: 93  KLTIQNRQAQIEVV 106


>UniRef50_P30050 Cluster: 60S ribosomal protein L12; n=158;
           Eukaryota|Rep: 60S ribosomal protein L12 - Homo sapiens
           (Human)
          Length = 165

 Score =  140 bits (338), Expect = 1e-32
 Identities = 64/74 (86%), Positives = 69/74 (93%)
 Frame = +3

Query: 132 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITV 311
           MPPKFDPNEIK+V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIA AT DWKGL+ITV
Sbjct: 1   MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITV 60

Query: 312 QLTVQNRQAQIAVV 353
           +LT+QNRQAQI VV
Sbjct: 61  KLTIQNRQAQIEVV 74


>UniRef50_Q4V5X9 Cluster: IP07888p; n=8; Eukaryota|Rep: IP07888p -
           Drosophila melanogaster (Fruit fly)
          Length = 307

 Score =  138 bits (335), Expect = 3e-32
 Identities = 64/74 (86%), Positives = 69/74 (93%)
 Frame = +3

Query: 132 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITV 311
           MPPKFDP E+K+V LRCVGGEVGATSSLAPKIGPLGLSPKK+GDDIA ATSDWKGLKITV
Sbjct: 143 MPPKFDPTEVKLVYLRCVGGEVGATSSLAPKIGPLGLSPKKIGDDIAKATSDWKGLKITV 202

Query: 312 QLTVQNRQAQIAVV 353
            LT+QNRQA I+VV
Sbjct: 203 CLTIQNRQAAISVV 216


>UniRef50_Q01BX3 Cluster: Putative 60S ribosomal protein L12; n=1;
           Ostreococcus tauri|Rep: Putative 60S ribosomal protein
           L12 - Ostreococcus tauri
          Length = 230

 Score =  117 bits (282), Expect = 8e-26
 Identities = 55/76 (72%), Positives = 65/76 (85%), Gaps = 1/76 (1%)
 Frame = +3

Query: 129 KMPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATS-DWKGLKI 305
           KMPPKFDPN    + +R  GGEVGA SSLAPKIGPLGLSPKKVG+DIA  T+ DWKGL++
Sbjct: 62  KMPPKFDPNATLEIFMRATGGEVGAASSLAPKIGPLGLSPKKVGEDIAKETAKDWKGLRV 121

Query: 306 TVQLTVQNRQAQIAVV 353
           TV+LTVQNRQA+++VV
Sbjct: 122 TVKLTVQNRQAKVSVV 137


>UniRef50_Q6DI58 Cluster: Rpl12 protein; n=1; Mus musculus|Rep:
           Rpl12 protein - Mus musculus (Mouse)
          Length = 218

 Score =  113 bits (272), Expect = 1e-24
 Identities = 53/62 (85%), Positives = 57/62 (91%)
 Frame = +3

Query: 168 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITVQLTVQNRQAQIA 347
           V LRC GGEVGATS+LAPKIGPLGLSPKKVGDDIA AT DWKGL+ITV+LT+QNRQAQI 
Sbjct: 106 VYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWKGLRITVKLTIQNRQAQIE 165

Query: 348 VV 353
           VV
Sbjct: 166 VV 167


>UniRef50_Q38D53 Cluster: 60S ribosomal protein L12, putative; n=3;
           Trypanosoma|Rep: 60S ribosomal protein L12, putative -
           Trypanosoma brucei
          Length = 219

 Score =  107 bits (258), Expect = 7e-23
 Identities = 49/74 (66%), Positives = 60/74 (81%)
 Frame = +3

Query: 129 KMPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKIT 308
           KMPPKFDPN+   V +R VGGEV AT+SLAPK+GPLGL+ KK+G+DIA +T DWKGLK+T
Sbjct: 55  KMPPKFDPNQEITVVVRAVGGEVPATASLAPKVGPLGLNAKKIGEDIAKSTKDWKGLKVT 114

Query: 309 VQLTVQNRQAQIAV 350
            QL V+NR A + V
Sbjct: 115 CQLRVKNRVATVIV 128


>UniRef50_Q0CUU2 Cluster: 60S ribosomal protein L12; n=1;
           Aspergillus terreus NIH2624|Rep: 60S ribosomal protein
           L12 - Aspergillus terreus (strain NIH 2624)
          Length = 189

 Score =  104 bits (249), Expect = 8e-22
 Identities = 54/98 (55%), Positives = 67/98 (68%), Gaps = 24/98 (24%)
 Frame = +3

Query: 132 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDW------- 290
           MPPKFDPNE+K+++LR  GGEVGA S+LAPKIGPLGLSPKK+G+DIA  T DW       
Sbjct: 1   MPPKFDPNEVKVIHLRVTGGEVGAQSALAPKIGPLGLSPKKIGEDIAKNTGDWVSTQYGC 60

Query: 291 -----------------KGLKITVQLTVQNRQAQIAVV 353
                            KGL++TV+LT+QNRQA ++VV
Sbjct: 61  CDARKEQWLTWTVSAVQKGLRVTVKLTIQNRQAAVSVV 98


>UniRef50_A0BE24 Cluster: Chromosome undetermined scaffold_101,
           whole genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_101,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 164

 Score = 97.9 bits (233), Expect = 7e-20
 Identities = 39/74 (52%), Positives = 55/74 (74%)
 Frame = +3

Query: 132 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITV 311
           MPPK DPNE++++N++  GGE G  S+LAPK+GPLGL+PK+VGD I   +  WKG+++ V
Sbjct: 1   MPPKVDPNEVRLINIKVFGGEGGPASTLAPKLGPLGLNPKQVGDKIIAESGKWKGIRVMV 60

Query: 312 QLTVQNRQAQIAVV 353
            L  QNR A + V+
Sbjct: 61  NLRCQNRNADVTVI 74


>UniRef50_Q4Y4I9 Cluster: 60S ribosomal protein L12, putative; n=9;
           Eukaryota|Rep: 60S ribosomal protein L12, putative -
           Plasmodium chabaudi
          Length = 177

 Score = 97.1 bits (231), Expect = 1e-19
 Identities = 45/62 (72%), Positives = 53/62 (85%)
 Frame = +3

Query: 168 VNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITVQLTVQNRQAQIA 347
           V +R VGGEVGA+S L+PK+GPLGLSPKK+GDDIA  T  WKGLKI V+LT+QNRQA+I 
Sbjct: 25  VYIRQVGGEVGASSVLSPKLGPLGLSPKKIGDDIAKETQSWKGLKICVKLTIQNRQAKIE 84

Query: 348 VV 353
           VV
Sbjct: 85  VV 86


>UniRef50_P87267 Cluster: Putative uncharacterized protein YDR417C
           precursor; n=1; Saccharomyces cerevisiae|Rep: Putative
           uncharacterized protein YDR417C precursor -
           Saccharomyces cerevisiae (Baker's yeast)
          Length = 123

 Score = 87.0 bits (206), Expect = 1e-16
 Identities = 49/90 (54%), Positives = 55/90 (61%)
 Frame = -3

Query: 415 FTVQGGGSLRGSDDKGLLQRGTTAIWACLF*TVSCTVILRPFQSLVALAMSSPTFLGDRP 236
           F +  GGS +    K     GTT   ACLF   + TV L P  SLVALA+SSPTF GD+P
Sbjct: 11  FFLSLGGSFKAVMTKEEAD-GTTEAAACLFWIFNWTVTLIPLNSLVALAISSPTFFGDKP 69

Query: 235 RGPILGAKDDVAPTSPPTHRKFTILISFGS 146
            GPI GAK   APTSPPT  K+  L SFGS
Sbjct: 70  NGPIFGAKAAEAPTSPPTALKYKYLTSFGS 99


>UniRef50_Q4YLV7 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 84

 Score = 82.6 bits (195), Expect = 3e-15
 Identities = 38/52 (73%), Positives = 44/52 (84%)
 Frame = +3

Query: 165 IVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITVQLT 320
           IV +R VGGEVGA+S L+PK+GPLGLSPKK+GDDIA  T  WKGLKI V+LT
Sbjct: 33  IVYIRQVGGEVGASSVLSPKLGPLGLSPKKIGDDIAKETQSWKGLKICVKLT 84


>UniRef50_Q7QQ98 Cluster: GLP_243_12971_12423; n=1; Giardia lamblia
           ATCC 50803|Rep: GLP_243_12971_12423 - Giardia lamblia
           ATCC 50803
          Length = 182

 Score = 74.9 bits (176), Expect = 6e-13
 Identities = 34/74 (45%), Positives = 50/74 (67%)
 Frame = +3

Query: 132 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITV 311
           MPP+ DPN   ++ LR  GG + A ++L PKIGP GL PK VG+ I  AT  +KG+++ V
Sbjct: 1   MPPRADPNAEIVLYLRVKGGIIPAPNALGPKIGPYGLPPKVVGEKIHEATQGYKGIRVKV 60

Query: 312 QLTVQNRQAQIAVV 353
           ++  +NRQ  ++VV
Sbjct: 61  RIVSKNRQPTVSVV 74


>UniRef50_UPI0001560E03 Cluster: PREDICTED: hypothetical protein;
           n=1; Equus caballus|Rep: PREDICTED: hypothetical protein
           - Equus caballus
          Length = 169

 Score = 71.7 bits (168), Expect = 6e-12
 Identities = 35/70 (50%), Positives = 45/70 (64%)
 Frame = -2

Query: 341 LGLSVLNCQLHSDLETLPVTCGXGNVITHLFRRQTKRTDFRGQR*CGTDFPADTSQIHDF 162
           L LSVL+ Q HSD +TLP+T   G+VI HLF RQT+  +  GQ   GTD P    Q+HDF
Sbjct: 80  LSLSVLDRQFHSDPQTLPITSCLGDVIAHLFWRQTQGANLGGQGRRGTDVPTGAPQVHDF 139

Query: 161 NFIWVKLRGH 132
           + + V+L  H
Sbjct: 140 DLVGVELGWH 149


>UniRef50_Q8SR84 Cluster: 60S ribosomal protein L12; n=4;
           Eukaryota|Rep: 60S ribosomal protein L12 -
           Encephalitozoon cuniculi
          Length = 166

 Score = 68.9 bits (161), Expect = 4e-11
 Identities = 37/69 (53%), Positives = 51/69 (73%), Gaps = 1/69 (1%)
 Frame = +3

Query: 147 DPNEIKIVNLRCVGGEV-GATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITVQLTV 323
           DP + K + L+ VGGEV GAT  LA ++GPLGLS K VG+DI  AT+D+K LK+ VQL +
Sbjct: 8   DP-DTKYIKLQVVGGEVPGAT--LAQRVGPLGLSSKVVGEDIKKATADYKSLKVHVQLAI 64

Query: 324 QNRQAQIAV 350
           ++R+A + V
Sbjct: 65  KDRKATVEV 73


>UniRef50_A7TCB3 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 136

 Score = 66.9 bits (156), Expect = 2e-10
 Identities = 30/37 (81%), Positives = 33/37 (89%)
 Frame = +3

Query: 132 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGL 242
           MPPKF+ NEI+ V LRC GGEVGAT+SLAPKIGPLGL
Sbjct: 1   MPPKFELNEIQYVYLRCTGGEVGATASLAPKIGPLGL 37


>UniRef50_Q3LW80 Cluster: Ribosomal protein L2; n=1; Bigelowiella
           natans|Rep: Ribosomal protein L2 - Bigelowiella natans
           (Pedinomonas minutissima) (Chlorarachnion sp.(strain
           CCMP 621))
          Length = 153

 Score = 66.1 bits (154), Expect = 3e-10
 Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
 Frame = +3

Query: 162 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXAT-SDWKGLKITVQLTVQNRQA 338
           K+V ++  GG+V + S LA KIGP GLSPKK+G+D A  T  +W G+ +T++LT+  + A
Sbjct: 7   KVVYIKSKGGQVASASVLAQKIGPYGLSPKKIGEDFAKKTKKNWDGIIVTIKLTIIKKNA 66

Query: 339 QIAVV 353
            + +V
Sbjct: 67  YLKIV 71


>UniRef50_Q6CYA6 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
           Similarity - Kluyveromyces lactis (Yeast) (Candida
           sphaerica)
          Length = 202

 Score = 65.7 bits (153), Expect = 4e-10
 Identities = 33/76 (43%), Positives = 48/76 (63%)
 Frame = -2

Query: 353 NNSYLGLSVLNCQLHSDLETLPVTCGXGNVITHLFRRQTKRTDFRGQR*CGTDFPADTSQ 174
           NN    LSVL+ QL+S+L+TL +  G G++ T+L   QT+ T+   Q    T+F  D+SQ
Sbjct: 107 NNRSSSLSVLDLQLNSNLDTLEILGGLGDIFTNLLWGQTQWTNLWSQSSGSTNFTTDSSQ 166

Query: 173 IHDFNFIWVKLRGHFV 126
           +   +FIW+KL  HFV
Sbjct: 167 VQVLDFIWIKLWRHFV 182


>UniRef50_UPI0000D9D615 Cluster: PREDICTED: similar to 60S ribosomal
           protein L12; n=1; Macaca mulatta|Rep: PREDICTED: similar
           to 60S ribosomal protein L12 - Macaca mulatta
          Length = 268

 Score = 62.5 bits (145), Expect = 3e-09
 Identities = 28/39 (71%), Positives = 30/39 (76%)
 Frame = +3

Query: 138 PKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKK 254
           PKF P EIK+  LRC G EV A S+LAPKI PLGLSPKK
Sbjct: 131 PKFGPKEIKVAYLRCTGDEVSAMSALAPKISPLGLSPKK 169


>UniRef50_A2AB20 Cluster: Kinesin family member C1; n=3;
           Catarrhini|Rep: Kinesin family member C1 - Homo sapiens
           (Human)
          Length = 203

 Score = 50.0 bits (114), Expect = 2e-05
 Identities = 21/34 (61%), Positives = 21/34 (61%)
 Frame = -1

Query: 294 PSSHLWXWQCHHPPF*ETDQEDRF*GPKMMWHRL 193
           PSSH   WQCHH PF ETD   R  GP   WHRL
Sbjct: 85  PSSHPLPWQCHHQPFLETDPGGRSWGPGQKWHRL 118


>UniRef50_P54030 Cluster: 50S ribosomal protein L11P; n=16;
           Archaea|Rep: 50S ribosomal protein L11P - Methanococcus
           jannaschii
          Length = 161

 Score = 40.7 bits (91), Expect = 0.012
 Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
 Frame = +3

Query: 162 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITVQLTV--QNRQ 335
           ++V +   GG   A   L P IGPLG++  +V  +I   T D++G+++ V++ V  + R+
Sbjct: 4   EVVEVLVTGGRATAGPPLGPAIGPLGVNVMQVVKEINEKTKDYEGMQVPVKVIVDTETRK 63

Query: 336 AQIAV 350
            +I V
Sbjct: 64  FEIEV 68


>UniRef50_P62445 Cluster: 50S ribosomal protein L11P; n=9;
           Archaea|Rep: 50S ribosomal protein L11P - Methanococcus
           maripaludis
          Length = 159

 Score = 38.3 bits (85), Expect = 0.063
 Identities = 18/54 (33%), Positives = 31/54 (57%)
 Frame = +3

Query: 162 KIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITVQLTV 323
           ++V +   GG+  A   L P IGPLG++  +V   I   T D++G+ + V++ V
Sbjct: 4   QVVEILVSGGKATAGPPLGPAIGPLGVNIMQVVQKINNMTKDYEGMSVPVKVIV 57


>UniRef50_Q97BN1 Cluster: 50S ribosomal protein L11P; n=4;
           Euryarchaeota|Rep: 50S ribosomal protein L11P -
           Thermoplasma volcanium
          Length = 158

 Score = 35.5 bits (78), Expect = 0.44
 Identities = 15/46 (32%), Positives = 28/46 (60%)
 Frame = +3

Query: 186 GGEVGATSSLAPKIGPLGLSPKKVGDDIAXATSDWKGLKITVQLTV 323
           GG+      + P +GPLGL+  +V  +I   T +++G+++ V +TV
Sbjct: 11  GGKATTGPPIGPALGPLGLNVAQVVKEINEKTKEFQGMQVPVTVTV 56


>UniRef50_A0FZB1 Cluster: Putative uncharacterized protein; n=2;
           Proteobacteria|Rep: Putative uncharacterized protein -
           Burkholderia phymatum STM815
          Length = 280

 Score = 33.5 bits (73), Expect = 1.8
 Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
 Frame = -2

Query: 164 FNFIWVKLRGHFVDYLVQLYT-IITLNPNG*VWIPQGLPPERSETLAAHVEK 12
           F   +  ++GH ++Y    Y+ ++ +NP    W+P+G P   S+ L +  E+
Sbjct: 156 FEACFEAVKGHKLEYAPPRYSDLVLMNPASYAWVPEGTPGVSSKWLGSFTER 207


>UniRef50_Q5CXY0 Cluster: Signal peptide-containing protein with
           transmembrane domain; n=2; Cryptosporidium|Rep: Signal
           peptide-containing protein with transmembrane domain -
           Cryptosporidium parvum Iowa II
          Length = 1633

 Score = 31.5 bits (68), Expect = 7.2
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -2

Query: 305 DLETLPVTCGXGNVITHLFRRQTKRTDFRG 216
           D+ T   TC  G+VITH+  +  K+T+  G
Sbjct: 848 DVGTFAFTCPKGHVITHIHAKSNKKTELMG 877


>UniRef50_A6PLT7 Cluster: Regulatory protein GntR, HTH; n=1;
           Victivallis vadensis ATCC BAA-548|Rep: Regulatory
           protein GntR, HTH - Victivallis vadensis ATCC BAA-548
          Length = 392

 Score = 31.1 bits (67), Expect = 9.6
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = -1

Query: 381 LMIRGCCRGEQQLSGLVCFELSAA 310
           L+IR  C G+++LSG +C EL AA
Sbjct: 351 LVIRDSCAGKEKLSGRICEELRAA 374


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 436,284,981
Number of Sequences: 1657284
Number of extensions: 8500166
Number of successful extensions: 20293
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 19804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20281
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 19465676618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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